>gi| /home/andreani/potential/BENCHMARK/BM4/SCORE_DECOYS_15deg/1R6Q/complex.1.pdb B 89|PDB|input
DALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETK---------------------------------------------VAMVNKYARENEHPLLCTLEKAGA
>gi|156934623|Cronobacter_sakazakii|YP_001438539.1| ATP-dependent Clp protease adaptor protein ClpS [Cronobacter sakazakii ATCC BAA-894]  _lim(1-106(1500),106)
EALKPPSMYKVILMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYQGKAICGVFTAEVAETK---------------------------------------------VALVNKYARENDHPLLCTLEK---
>gi|146311056|Enterobacter_sp.|YP_001176130.1| ATP-dependent Clp protease adaptor protein ClpS [Enterobacter sp. 638]  _lim(1-106(1500),106)
DALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETK---------------------------------------------VAMVNEYARENEHPLLCTLEK---
>gi|152969471|Klebsiella_pneumoniae|YP_001334580.1| ATP-dependent Clp protease adaptor protein ClpS [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]  _lim(1-105(1500),105)
DAIKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYEGKAICGVFTAEVAETK---------------------------------------------VAMVNQYARENEHPLLCTLEK---
>gi|188534289|Erwinia_tasmaniensis|YP_001908086.1| ATP-dependent Clp protease adaptor protein ClpS [Erwinia tasmaniensis Et1/99]  _lim(1-106(1500),106)
EELKPPSMYKVILNNDDFTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFTAEVAETK---------------------------------------------VAHVNKYARDNEHPLLCTLEK---
>gi|157369916|Serratia_proteamaculans|YP_001477905.1| ATP-dependent Clp protease adaptor protein ClpS [Serratia proteamaculans 568]  _lim(1-106(1500),106)
DAVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFTAEVAETK---------------------------------------------VVHVNRYARENEHPLLCTLEK---
>gi|22126687|Yersinia_pestis|NP_670110.1| ATP-dependent Clp protease adaptor protein ClpS [Yersinia pestis KIM 10]  _lim(1-106(1500),106)
EALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLNVHYQGKAICGVFTAEVAETK---------------------------------------------VAHVNQYARENEHPLLCTLEK---
>gi|85059079|Sodalis_glossinidius|YP_454781.1| ATP-dependent Clp protease adaptor protein ClpS [Sodalis glossinidius str. 'morsitans']  _lim(1-106(1500),106)
DAVRPPSMYKVILINDDYTPMEFVIDVLQKFFSYDVERATQLMLRVHYQGKAVCGIYTAEVAETK---------------------------------------------AVHVNRYARENEHPLLCTLEK---
>gi|251789967|Dickeya_zeae|YP_003004688.1| ATP-dependent Clp protease adaptor protein ClpS [Dickeya zeae Ech1591]  _lim(1-106(1500),106)
EALQPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVYSAEVAETK---------------------------------------------VEQVNRYARENEHPLLCTLEK---
>gi|50121581|Pectobacterium_atrosepticum|YP_050748.1| ATP-dependent Clp protease adaptor protein ClpS [Pectobacterium atrosepticum SCRI1043]  _lim(1-106(1500),106)
EKLQPPSMYNVVLNNDDYTPMEFVIDVLQKFFSYDIERATQLMLTVHYQGKAICGVFSAEVAETK---------------------------------------------VVQVNRYARENEQPLLCTLEK---
>gi|238920382|Edwardsiella_ictaluri|YP_002933897.1| hypothetical protein NT01EI_2492 [Edwardsiella ictaluri 93-146]  _lim(1-106(1500),106)
RAVKPPSLYSVILNNDDYTPMEFVIEVLQTFFAYDIERATQLMLTVHYKGKAVCGVFTAEVAETK---------------------------------------------VALINRYARDNEHPLLCTLEK---
>gi|37680507|Vibrio_vulnificus|NP_935116.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio vulnificus YJ016]  _lim(1-106(1500),106)
TQIQPPKKYNVVLNNDDYTPMDFVIDVLERFFSHDLDKATQIMLKVHYEGKAICGTYSAEIAETK---------------------------------------------VAQVTMYSRENEHPLLCTMEQ---
>gi|28897787|Vibrio_parahaemolyticus|NP_797392.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio parahaemolyticus RIMD 2210633]  _lim(1-106(1500),106)
TKVQPPKLYNVVLNNDDYTPMDFVIEVLERFFSHDIDKATQIMLKVHYEGKAVCGTYSAEIAETK---------------------------------------------VAQVTMYARENEHPLLCTMEQ---
>gi|15641156|Vibrio_cholerae|NP_230788.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio cholerae O1 biovar El Tor str. N16961]  _lim(1-106(1500),106)
TAVKPPSMYHVVLNNDDYTPMDFVIEILERFFSMDIERATQVMLKVHYEGKAICGTFTAEVAETK---------------------------------------------VAQVTMYSRENEHPLLCTMEQ---
>gi|86146449|Vibrio_splendidus|ZP_01064772.1| ATP-dependent Clp protease adaptor protein ClpS [Vibrio sp. MED222]  _lim(1-106(1500),106)
TKVKPPAMYNVVLHNDDYTPMDFVIEILERFFSLDIEKATEVMLKVHYEGKAICGTYSAEIAETK---------------------------------------------VAQVTMYSKENEHPLLCTMEQ---
>gi|71278979|Colwellia_psychrerythraea|YP_269595.1| ATP-dependent Clp protease adaptor protein ClpS [Colwellia psychrerythraea 34H]  _lim(1-106(1500),106)
EQIEEPAKYYVFLLNDDYTPMDFVVDVLCNFFNKSEEQATDIMLTIHYKGKALCGTYTAEIAETK---------------------------------------------VEQVVQYAFENQHPLKCVMTK---
>gi|109898690|Pseudoalteromonas_atlantica|YP_661945.1| ATP-dependent Clp protease adaptor protein ClpS [Pseudoalteromonas atlantica T6c]  _lim(1-106(1500),106)
QKLAPPPMYKVLLNNDDYTPMDFVIEVLVRFFNLDSEKAHQIMLTVHYRGRAVCGVYTAEIAETK---------------------------------------------VMQVTQYAKKHQHPLMCTMEQ---
>gi|91793189|Shewanella_denitrificans|YP_562840.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella denitrificans OS217]  _lim(1-102(1500),102)
SELMPPSMYKVILNNDDYTPMDFVIEVLARFFDKHEPQATDIMLTIHHQGKGICGVYPFGIAETK---------------------------------------------VLQVNQFARENQHPLLCTLEK---
>gi|114563426|Shewanella_frigidimarina|YP_750939.1| ATP-dependent Clp protease adaptor protein ClpS [Shewanella frigidimarina NCIMB 400]  _lim(1-102(1500),102)
SELQPPHMYKVVLNNDDYTPMDFVVEVLQRFFEKNEQQAVDIMLAIHNQGKGLCGVFPFGIAETK---------------------------------------------VFQVNQFARENQHPLLCTLEK---
>gi|114320604|Alkalilimnicola_ehrlichii|YP_742287.1| ATP-dependent Clp protease adaptor protein ClpS [Alkalilimnicola ehrlichii MLHE-1]  _lim(1-106(1500),106)
PQVKRPPLFKVIILNDDYTPMDFVVEVLQKFFHMDRARATQVMLHVHTRGEGVCGVFSRDVAETK---------------------------------------------VNQVNDWSRQHEHPLMCTLKE---
>gi|53804154|Methylococcus_capsulatus|YP_114226.1| ATP-dependent Clp protease adaptor protein ClpS [Methylococcus capsulatus str. Bath]  _lim(1-106(1500),106)
PKVKRPPLYKVMLLNDDFTPMEFVVHVLMLFFGMNEEKATQVMLHVHTRGVGVCGVFSKDVAETK---------------------------------------------VQQVNAHARQNQHPLLCTMEE---
>gi|92114559|Chromohalobacter_salexigens|YP_574487.1| ATP-dependent Clp protease adaptor protein ClpS [Chromohalobacter salexigens DSM 3043]  _lim(1-131(1500),131)
PELAQPPMYKVVLHNDDFTPMEFVVEVLQSFFAMEREKAVQVMLVVHTHGKATCGIFTRDIAETK---------------------------------------------CHQVNEYARECQHPLLCDIDKT--
>gi|83633194|Hahella_chejuensis|ABC29161.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396] _lim(1-76(1500),76)
------------MLNDDYTPMDFVVEVLIRFFNMSEPKATQVMLAVHTQGRAVCGVFTRDIAESK---------------------------------------------AAQVNQYSSECEHPLLCEIERA--
>gi|58582177|Xanthomonas_oryzae|YP_201193.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthomonas oryzae pv. oryzae KACC10331]  _lim(1-126(1500),126)
PEVAPPPRYQVLLLNDDYTPMDFVVTVLEQFFNLNLEQATQIMLHVHTRGRGVCGVYSREVAESK---------------------------------------------VAQVNEFSRMNQHPLLCTMEQ---
>gi|74317254|Thiobacillus_denitrificans|YP_314994.1| ATP-dependent Clp protease adaptor protein ClpS [Thiobacillus denitrificans ATCC 25259]  _lim(1-102(1500),102)
AKVKPPPLYKVLLLNDDYTPMEFVVHVLRKFFGIDEERATQIMLKVHTEGVGVCGVFTRDIAHTK---------------------------------------------VEQVVDFARQHQHPLQCTMEE---
>gi|34499123|Chromobacterium_violaceum|NP_903338.1| hypothetical protein CV_3668 [Chromobacterium violaceum ATCC 12472]  _lim(1-106(1500),106)
VRENPPPMYKVLLLNDDFTPMDFVVQVLQQFFHMNREKATHIMLQVHTQGHGVCGVYTKDVAATK---------------------------------------------VEQVLQYAKAHQHPLQCVMEE---
>gi|217969671|Thauera_sp.|YP_002354905.1| ATP-dependent Clp protease adaptor protein ClpS [Thauera sp. MZ1T]  _lim(1-102(1500),102)
TRTRPPPLFKVMLLNDDYTPMDFVIVVLQKYFGMDRERATRVMLQVHREGMGVCGVFPRDIATTK---------------------------------------------VEQVTSFARQHQHPLACVMEE---
>gi|119897424|Azoarcus_sp.|YP_932637.1| ATP-dependent Clp protease adaptor protein ClpS [Azoarcus sp. BH72]  _lim(1-102(1500),102)
TRTRPPPLYKVLLLNDDFTPMDFVIVVLQKYFSMDRERATRVMLQVHREGMGVCGVFPRDIASTK---------------------------------------------VEQVVSFARQHQHPLACVMEE---
>gi|56477975|Aromatoleum_aromaticum|YP_159564.1| ATP-dependent Clp protease adaptor protein ClpS [Aromatoleum aromaticum EbN1]  _lim(1-102(1500),102)
TRTKPPPLYKVLLLNDDFTPMDFVIVVLQKFFGMDRERATRVMLQVHREGMGVCGVFPKDVAATK---------------------------------------------VEQVVAFARQHQHPLACVMEE---
>gi|71908707|Dechloromonas_aromatica|YP_286294.1| ATP-dependent Clp protease adaptor protein ClpS [Dechloromonas aromatica RCB]  _lim(1-102(1500),102)
SRLGPPKMYKVVLLNDDYTPMDFVITVLQRFFSLDTEQATRIMLKVHNEGRGVCGVFPRDIAATK---------------------------------------------VEQVSAFARQHQHPLACIMEE---
>gi|253999942|Methylovorus_sp.|YP_003052005.1| ATP-dependent Clp protease adaptor protein ClpS [Methylovorus sp. SIP3-4]  _lim(1-103(1500),103)
ARPKPPSMYKVILLNDDYTPMEFVVEVIQRFFNKSREQATQIMLKVHTEGAGICGVYPHDIAETK---------------------------------------------VNQVLGYAREYQHPLQCAMEE---
>gi|91774864|Methylobacillus_flagellatus|YP_544620.1| ATP-dependent Clp protease adaptor protein ClpS [Methylobacillus flagellatus KT]  _lim(1-128(1500),128)
ANIKPPSMYKVILLNDDYTPMEFVVDVMQRFFHKNREQATQIMLQVHTEGAGVCGVYPHGIAETK---------------------------------------------VNQVISYAREHQHPLQCTMEE---
>gi|33593716|Bordetella_pertussis|NP_881360.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella pertussis Tohama I]  _lim(1-104(1500),104)
ARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNSEDATRIMLQVHHEGRAVCGVYPRDLAATR---------------------------------------------IAQVSQYARARQHPLQCIMEP---
>gi|163856974|Bordetella_petrii|YP_001631272.1| ATP-dependent Clp protease adaptor protein ClpS [Bordetella petrii DSM 12804]  _lim(1-104(1500),104)
ARTAPPPMYQVVLLNDDYTPMEFVVKVLQKFFGKNQEDATRIMLQVHHEGRGTCGVYPRDVAATR---------------------------------------------IAQVAQYARARQHPLQCVMEP---
>gi|171058346|Leptothrix_cholodnii|YP_001790695.1| ATP-dependent Clp protease adaptor protein ClpS [Leptothrix cholodnii SP-6]  _lim(1-115(1500),115)
QRVEPPRVYQVVMLNDDFTPMEFVVMVLQQFFRHDLEAATQIMLKIHHEGRAVCGVYTQDVAATK---------------------------------------------VEMVQAAARRAGHPLQCTMEV---
>gi|124267648|Methylibium_petroleiphilum|YP_001021652.1| hypothetical protein Mpe_A2462 [Methylibium petroleiphilum PM1]  _lim(1-118(1500),118)
ARVEPPRMYQVVLLNDDYTPMEFVVMVLQEFFQRDIETATQIMLKIHHEGRGVCGVYTKDVASTK---------------------------------------------VESVLAAAKRSGHPLQCTMEA---
>gi|91788801|Polaromonas_sp.|YP_549753.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas sp. JS666]  _lim(1-125(1500),125)
QKTKPPQMYQVVLLNDDYTPMEFVVVILQEFFNKDHETATQIMLKIHLDGKGVCGVFSKDVAATK---------------------------------------------VDQVTEAARKNGHPLQCVSEPI--
>gi|121604835|Polaromonas_naphthalenivorans|YP_982164.1| ATP-dependent Clp protease adaptor protein ClpS [Polaromonas naphthalenivorans CJ2]  _lim(1-145(1500),145)
QKTKPPQMYQVVLLNDDYTPMEFVVVVIQEFFNKDRETATQIMLKIHLDGKGICGVFSRDVAATK---------------------------------------------VDQVTEAARKNGHPLQCVSEPI--
>gi|89901532|Albidiferax_ferrireducens|YP_524003.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodoferax ferrireducens T118]  _lim(1-120(1500),120)
QKTKPPHMYQVVMLNDDYTPMEFVVVVIQEFFGKDLEAATRIMLKIHLDGKGVCGVYSKDVAATK---------------------------------------------VDQVLDAANKAGHPLKCISEPVG-
>gi|121594198|Acidovorax_sp.|YP_986094.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax sp. JS42]  _lim(1-135(1500),135)
QKTQPPQMYQVVMLNDDYTPMEFVVVVLQEFFNKDREAATQIMLKIHLDGKGVCGVYTRDVAATK---------------------------------------------VDQVLEAAHKAGHPLQCLSEPV--
>gi|120611897|Acidovorax_citrulli|YP_971575.1| ATP-dependent Clp protease adaptor protein ClpS [Acidovorax avenae subsp. citrulli AAC00-1]  _lim(1-122(1500),122)
QRTQPPQMYQVVMLNDDYTPMEFVIVVLQEFFGKDREAATQIMLKIHLDGKGVCGVYSRDVAATK---------------------------------------------VEQVREAAHKAGHPLQCLSEPV--
>gi|121611395|Verminephrobacter_eiseniae|YP_999202.1| ATP-dependent Clp protease adaptor protein ClpS [Verminephrobacter eiseniae EF01-2]  _lim(1-119(1500),119)
EKTPPPQMYQVVMLNDDYTPMEFVIVVLQEFFSKDRETATRIMLKIHLDGKGICGVYSHDVAATK---------------------------------------------VDQVLDAALKAGHPLQCVSEPV--
>gi|160898941|Delftia_acidovorans|YP_001564523.1| ATP-dependent Clp protease adaptor protein ClpS [Delftia acidovorans SPH-1]  _lim(1-125(1500),125)
QRVQPPQMYQVVMLNDDFTPMEFVIIVLQELFGKDRETATQIMLKIHLDGRGVCGVYSRDVAATK---------------------------------------------VEQVLQAAQKAGHPLQAMFEPV--
>gi|114332013|Nitrosomonas_eutropha|YP_748235.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrosomonas eutropha C91]  _lim(1-103(1500),103)
TRLTPPPLYKVILINDDFTPMDFVVKVLRHFFFMDEEMATRIMLKIHTEGAGICGTYPGDIAATK---------------------------------------------VQQVNEFSKQNQHPLMCVMEK---
>gi|30249694|Nitrosomonas_europaea|NP_841764.1| hypothetical protein NE1732 [Nitrosomonas europaea ATCC 19718]  _lim(1-103(1500),103)
ARLNPPPLYKVILINDDFTPMDFVVKVLRHFFLMNEEMATKVMLKIHIEGAGICGIYPSDIAVTK---------------------------------------------VQQVNDFSRQNQHPLMCVMEK---
>gi|158423218|Azorhizobium_caulinodans|YP_001524510.1| ATP-dependent Clp protease adaptor protein [Azorhizobium caulinodans ORS 571]  _lim(1-131(1500),131)
PQVKRPNLYRVLLLNDDYTPMDFVVHVLERFFSKSREEANTIMLHVHHHGVGECGVYTYEVAETK---------------------------------------------VTQVMDFARKHQHPLQCVMEK---
>gi|154248457|Xanthobacter_autotrophicus|YP_001419415.1| ATP-dependent Clp protease adaptor protein ClpS [Xanthobacter autotrophicus Py2]  _lim(1-124(1500),124)
PQTKRPSLYRVLLLNDDYTPMEFVVHVLERFFNKDRDQANTIMLHVHNHGVGECGVFTYEVAETK---------------------------------------------VTQVMDFARKHQHPLQCVMEK---
>gi|75675888|Nitrobacter_winogradskyi|YP_318309.1| ATP-dependent Clp protease adaptor protein ClpS [Nitrobacter winogradskyi Nb-255]  _lim(1-136(1500),136)
TKTKRPNLYRVLILNDDYTPMEFVVHVLEKFFQKDLEAATQIMLHVHHHGIGECGVFTYEVAETK---------------------------------------------VTQVMDFARKHQHPLQCVMEK---
>gi|217976934|Methylocella_silvestris|YP_002361081.1| ATP-dependent Clp protease adaptor protein ClpS [Methylocella silvestris BL2]  _lim(1-169(1500),169)
TQTRRPSMYRVLLLNDDYTPMEFVVAVLKKYFNKGPEEATRIMLHVHQHGVGECGVFTYEVAETK---------------------------------------------VTQVMDYARKHQHPLQCIMEK---
>gi|153009350|Ochrobactrum_anthropi|YP_001370565.1| ATP-dependent Clp protease adaptor protein ClpS [Ochrobactrum anthropi ATCC 49188]  _lim(1-124(1500),124)
PKTKKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNQDDATRIMLHVHNHGVGECGVFTYEVAETK---------------------------------------------VSQVMDFARQNQHPLQCVMEK---
>gi|110633725|Chelativorans_sp.|YP_673933.1| ATP-dependent Clp protease adaptor protein ClpS [Mesorhizobium sp. BNC1]  _lim(1-133(1500),133)
TKTKKPSLYRVLLLNDDYTPMEFVVHVLERFFQKDREAATMIMLHVHNHGVGECGIYTFEVAETK---------------------------------------------VSQVMDFARQHQHPLQCVMEK---
>gi|150396335|Sinorhizobium_medicae|YP_001326802.1| ATP-dependent Clp protease adaptor protein ClpS [Sinorhizobium medicae WSM419]  _lim(1-117(1500),117)
PKTKKPSLYRVLLLNDDYTPMEFVIHILERFFQKDREEATTIMLHVHNHGVGECGVFTYEVAETK---------------------------------------------VTQVMDFARQHQHPLQCVMEK---
>gi|146276596|Rhodobacter_sphaeroides|YP_001166755.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodobacter sphaeroides ATCC 17025]  _lim(1-113(1500),113)
SKTQRPPLYKVLLLNDDYTPMEFVVHVLERFFGLSHAQAFEIMLTVHKKGLAVVGVFSFEVAETK---------------------------------------------VAQVMDFARRHQHPLQCTMEK---
>gi|119384493|Paracoccus_denitrificans|YP_915549.1| ATP-dependent Clp protease adaptor protein ClpS [Paracoccus denitrificans PD1222]  _lim(1-105(1500),105)
PRTQRPPMYKVLLLNDDFTPMEFVVHVLERLFNMNHAQAIEIMLTVHRKGIAVVGVFSHEIAETK---------------------------------------------VAQVMELARRQQHPLQCTMEK---
>gi|99082374|Ruegeria_sp.|YP_614528.1| ATP-dependent Clp protease adaptor protein ClpS [Ruegeria sp. TM1040]  _lim(1-113(1500),113)
PRTQRPPRYKVLLLNDDYTPMEFVVIVLERFFGLNHAQAFEIMLTVHKKGLAVVGVFSHEVAETK---------------------------------------------VAQVMDYARRHQHPLQCTMEKD--
>gi|114569835|Maricaulis_maris|YP_756515.1| ATP-dependent Clp protease adaptor protein ClpS [Maricaulis maris MCS10]  _lim(1-109(1500),109)
PATKKPSLYRVLLLNDDYTPMEFVVEVLARIFRKSPEDAARIMLHVHQNGVGMCGVYTYEVAETK---------------------------------------------VAQVMDAARRAQHPLQCTMEK---
>gi|148261528|Acidiphilium_cryptum|YP_001235655.1| ATP-dependent Clp protease adaptor protein ClpS [Acidiphilium cryptum JF-5]  _lim(1-118(1500),118)
TKTRKPSLYKVLMLNDDYTPMEFVVHVLERFFGKSRQEAERIMLHVHRRGVGVCGVFTYEVAETK---------------------------------------------VTQVMDLARQSQHPLQCTIEK---
>gi|162149242|Gluconacetobacter_diazotrophicus|YP_001603703.1| ATP-dependent Clp protease adaptor protein ClpS [Gluconacetobacter diazotrophicus PAl 5]  _lim(1-146(1500),146)
PQTRKPAMYKVLMLNDDYTPMEFVVHVLERFFQKSRDEATDIMLHVHKRGVGVCGVFTYEVAETK---------------------------------------------VTQVMDLARQNQHPLQCTIEK---
>gi|209964988|Rhodospirillum_centenum|YP_002297903.1| ATP-dependent Clp protease adaptor protein ClpS,putative [Rhodospirillum centenum SW]  _lim(1-108(1500),108)
PKTKKPSMYKVLMLNDDYTPMEFVVHVLERFFNKNREEATRIMLHVHRRGVGVCGVFTYEVAETK---------------------------------------------VTQVMDFARQHQHPLQCTLEK---
>gi|83593445|Rhodospirillum_rubrum|YP_427197.1| ATP-dependent Clp protease adaptor protein ClpS [Rhodospirillum rubrum ATCC 11170]  _lim(1-137(1500),137)
PKTKKPSMYRVLMLNDDYTPMEFVVHVLERFFGKTHEEATNIMLHVHQRGVGLCGVYTYEVAETK---------------------------------------------VSQVMDLARRSQHPLQCTLEK---
>gi|254294360|Hirschia_baltica|YP_003060383.1| ATP-dependent Clp protease adaptor protein ClpS [Hirschia baltica ATCC 49814]  _lim(1-109(1500),109)
TKTKRPSLYRVLILNDDFTPMEFVVLILEHFFNKTREEATKVMLHVHNTGVGVCGVFTYEVAETK---------------------------------------------VAQVMDLARRSEHPLQCTMERE--
>gi|114799620|Hyphomonas_neptunium|YP_759751.1| ATP-dependent Clp protease, adaptor protein ClpS [Hyphomonas neptunium ATCC 15444]  _lim(1-118(1500),118)
IKTKKPSLYRVLLLNDDYTPMEFVVFILERFFNRSREQATRIMLHVHQKGVGLCGVYTYEVAETK---------------------------------------------VAQVLDLARRHEHPLQCVMEKE--
>gi|87198523|Novosphingobium_aromaticivorans|YP_495780.1| ATP-dependent Clp protease adaptor protein ClpS [Novosphingobium aromaticivorans DSM 12444]  _lim(1-126(1500),126)
ARPKKPSQFKVLMLNDDYTPMEFVVMVLKRFFNMDLEQATRVMLHVHQRGVGVCGIFPYEIAETK---------------------------------------------VNQVMDFARQNQHPLQCTLEK---
>gi|241762133|Zymomonas_mobilis|ZP_04760216.1| ATP-dependent Clp protease adaptor protein ClpS [Zymomonas mobilis subsp. mobilis ATCC 10988]  _lim(1-107(1500),107)
PQTKKPQPYKVLMLNDDYTPMEFVVLCLQRFFRMGIEDATKVMLQVHQRGVGICGVFTYEVAETK---------------------------------------------VNQVVDFARQHQHPLQCTLEK---
>gi|148653394|Psychrobacter_sp.|YP_001280487.1| ATP-dependent Clp protease adaptor protein ClpS [Psychrobacter sp. PRwf-1]  _lim(1-140(1500),140)
PEITEPPMYAVVMYNDDYTPMEFVVYVLQSEFRHNMDKAVEIMLNIHNQGRGIAGIYPKDIAETK---------------------------------------------AKKVNQTARKEGYPLLTQIEPHQS
>gi|218668114|Acidithiobacillus_ferrooxidans|YP_002425013.1| ATP-dependent Clp protease adaptor protein ClpS [Acidithiobacillus ferrooxidans ATCC 23270]  _lim(1-114(1500),114)
PQAQEPRMYRVLLVNDDFTPMDYVVHILEAYFHKPHDEAVAVMMAVHQQGRGLCGIFPYDLAETK---------------------------------------------VALVTADARQHQHPLRCIMEK---
>gi|162452665|Sorangium_cellulosum|YP_001615032.1| hypothetical protein sce4389 [Sorangium cellulosum 'So ce 56']  _lim(1-132(1500),132)
RKVEKPRRYKVVFHNDDYTTMEFVVLVLMKFFHRTETEATHIMLSVHHRGHGVAGVYTKDVAETK---------------------------------------------VAQVQDFAKEHGMPLRLTAEP---
>gi|118602881|Candidatus_Ruthia|YP_904096.1| ATP-dependent Clp protease adaptor protein ClpS [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)]  _lim(1-99(1500),99)
PKFKKPNKFQVLLLNDDYTTMEFVIDVLVQFFSKSEEAAQATMLKIHIEGEGICGIFSYDIAQTK---------------------------------------------VTQVIEFARKNEQPLICVLRELK-
>gi|226355736|Deinococcus_deserti|YP_002785476.1| ATP-dependent Clp protease adaptor protein clpS [Deinococcus deserti VCD115]  _lim(1-105(1500),105)
SATQRPRLYRVLLLNDDYTPMEFVVRVLELYFRKTEQEAELIMLAVHHKGQGVAGIYTRDVAETK---------------------------------------------VAQVTDRARQEGYPLRLVSEPETE
>gi|51244739|Desulfotalea_psychrophila|YP_064623.1| hypothetical protein DP0887 [Desulfotalea psychrophila LSv54]  _lim(1-102(1500),102)
IETREPPMYRVLIHNDDYTSMDFVVAILMQIFSKTEAVAEEIMLTVHSSEVGVAGLYTHEIAETK---------------------------------------------VAIVHQLAEQNEFPLRCSLEK---
>gi|85858021|Syntrophus_aciditrophicus|YP_460223.1| ATP-dependent Clp protease adaptor protein [Syntrophus aciditrophicus SB]  _lim(1-107(1500),107)
DKVMEPRMYRVILHNDHYTTMDFVVQILMTIFHKPAAQATRIMLDVHRKGQGVCGVYTYDIASTK---------------------------------------------IAQVHFMARQNEYPLRCSMDE---
>gi|15895099|Clostridium_acetobutylicum|NP_348448.1| hypothetical protein CA_C1823 [Clostridium acetobutylicum ATCC 824]  _lim(1-101(1500),101)
HKIEKPKMYKVILHNDDYTTMEFVIEILINVFNKVPANAVKITFDVHKNGIGIAGVYPYDIAATK---------------------------------------------INEVKKLAYKNGYPLKLTMGE---
>gi|39931007|Helicobacter_hepaticus|Q7VFW0.2|CLPS_HELHP RecName: Full=ATP-dependent Clp protease adapter protein ClpS _lim(1-99(1500),99)
TLLEEPKMYRVLLLNDDWTAMDFVARILMEVFDKTSDEATAITLKIHNDGKGVCGIYTYDIAELK---------------------------------------------MQIVSQMAKQHGYPLRVITEEM--
>gi|109946679|Helicobacter_acinonychis|YP_663907.1| hypothetical protein Hac_0045 [Helicobacter acinonychis str. Sheeba]  _lim(1-91(1500),91)
YKIPIPTMSGVIMLNDPVTKAEFVISTLRDVFDKSLEEAQDLMLSIHHNGDGVCGVYPYEIAIYK---------------------------------------------AVCVRDKARALKFPLRLMVQEI--
>gi|254778767|Helicobacter_pylori|YP_003056872.1| ATP-dependent Clp protease adaptor protein ClpS [Helicobacter pylori B38]  _lim(1-91(1500),91)
YNIPTPTMAQVIMVDDPITTTEFVISALRDFFDKSLEEAKDLTSSIHRDGEGVCGVYPYDIARHR---------------------------------------------AAWVKDKARALEFPLKLLVEEI--
>gi|57237989|Campylobacter_jejuni|YP_179238.1| hypothetical protein CJE1250 [Campylobacter jejuni RM1221]  _lim(1-96(1500),96)
TKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNLEKASQTMLEIHHNGSGICGIYTQEIALSK---------------------------------------------QKKVMDAAKLANFPLQAKVEE---
>gi|118475182|Campylobacter_fetus|YP_891885.1| ATP-dependent Clp protease adaptor protein ClpS [Campylobacter fetus subsp. fetus 82-40]  _lim(1-99(1500),99)
IKDFKPNLFKVMLLNDEVTTMDFVVMILIDIFNKSKNEAIELMLKIHQSGRAICGIYTKEIAQTK---------------------------------------------QMEVLNLAKANGFPLKCVIEE---
>gi|163840214|Renibacterium_salmoninarum|YP_001624619.1| ATP-dependent Clp protease adaptor protein [Renibacterium salmoninarum ATCC 33209]  _lim(1-104(1500),104)
QDASGEHPWSVVVWDDPINTMDYVSYVFQSYFGYGKERAEALMLQVHNGGKAVVSRGAREKAETD---------------------------------------------------MMAMHSFGLQATVRKGSD
>gi|116671131|Arthrobacter_sp.|YP_832064.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter sp. FB24]  _lim(1-122(1500),122)
ALTAPDIPWNLVIWNDPVNLMSYVSYVFQSYFGYSEPKANKLMMEVHKKGRSIVAHGSKEQVEQH---------------------------------------------------AVAMHGFGLWATVEKAAG
>gi|220913062|Arthrobacter_chlorophenolicus|YP_002488371.1| ATP-dependent Clp protease adaptor protein ClpS [Arthrobacter chlorophenolicus A6]  _lim(1-120(1500),120)
TLAAPDIPWNLVIWNDPVNLMSYVSYVFQSYFGYSEAKANKLMMEVHKKGRSIVTHGSKEQVERH---------------------------------------------------AVAMHGFGLWATVEKASG
>gi|152967709|Kineococcus_radiotolerans|YP_001363493.1| ATP-dependent Clp protease adaptor protein ClpS [Kineococcus radiotolerans SRS30216]  _lim(1-99(1500),99)
LTTVPDTPWVTLVWNDPVNLMSYVAYVFRTHFGYSQAKADALMLDVHQKGRAAVSAGSREAMERD---------------------------------------------------VEAMHGYGLWATLQKD--
>gi|72162771|Thermobifida_fusca|YP_290428.1| ATP-dependent Clp protease adaptor protein ClpS [Thermobifida fusca YX]  _lim(1-96(1500),96)
EDIRPDLPWVTIVWNDPVNLMSYVTYVFQKVFGYPKAKAQKLMEDVHYKGKAVVSSGTREEMERY---------------------------------------------------VTILHQYGLWATLQQD--
>gi|257069152|Brachybacterium_faecium|YP_003155407.1| hypothetical protein Bfae_20090 [Brachybacterium faecium DSM 4810]  _lim(1-107(1500),107)
GTLEADGPWCTVVWNDPVNLMSYVVFVFRRYFGYSHLVAEQLMMQVHEEGRAIVSRGSRERAETD---------------------------------------------------VQAMHSFGLQATLERAGE
>gi|172041152|Corynebacterium_urealyticum|YP_001800866.1| hypothetical protein cur_1472 [Corynebacterium urealyticum DSM 7109]  _lim(1-138(1500),138)
TLTDADLPWQCICWDDPVNLMSYVTYVFETVLGYSRKKATELMMRVHTEGKAVVSSGERDKVEGD---------------------------------------------------VKKLHTAGLWATMEQAT-
>gi|68535563|Corynebacterium_jeikeium|YP_250268.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium jeikeium K411]  _lim(1-101(1500),101)
TLTEPNLPWMCICWDDPVNLMSYVTYVFQTVLGYSRKRATELMMQVHTEGKAVVSSGERDKVEGD---------------------------------------------------VKKLQTAGLWATMQRAD-
>gi|145296512|Corynebacterium_glutamicum|YP_001139333.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium glutamicum R]  _lim(1-100(1500),100)
TLSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGD---------------------------------------------------VKKLHTAGLWATMQQA--
>gi|25028966|Corynebacterium_efficiens|NP_739020.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium efficiens YS-314]  _lim(1-186(1500),186)
TVSSENLPWLCIVWDDPVNLMSYVTYVFQTVLGYSRKRANELMMQVHTEGKAVVSSGEKDKVEGD---------------------------------------------------VKKLHVAGLWATMQQA--
>gi|38234427|Corynebacterium_diphtheriae|NP_940194.1| ATP-dependent Clp protease adaptor protein ClpS [Corynebacterium diphtheriae NCTC 13129]  _lim(1-113(1500),113)
VASSENLPWMCIVWDDPVNLMSYVTYVFQTILGYSKKRATELMMQVHTEGKAVVSSGERDKVEAD---------------------------------------------------VKKLHTAGLWATMQQG--
>gi|50843142|Propionibacterium_acnes|YP_056369.1| hypothetical protein PPA1680 [Propionibacterium acnes KPA171202]  _lim(1-198(1500),198)
RLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKDRDGGSRACDARLRFAGLGRKGRPRMRIEGTRNRWVWYLEHVEIIGIETALGYYVEALSRLRAAPAHSTTEGGRS
>gi|134097791|Saccharopolyspora_erythraea|YP_001103452.1| ATP-dependent Clp protease adaptor protein ClpS [Saccharopolyspora erythraea NRRL 2338]  _lim(1-97(1500),97)
ELGTEDKPWVTVVWNDPVNLMSYVTYVLQKIFGYSKDHATKLMLDVHHKGRAAVSSGSKEKVEGD---------------------------------------------------VAKLHAAGLWATMQKD--
>gi|290960033|Streptomyces_scabiei|YP_003491215.1| ATP-dependent Clp protease adaptor protein [Streptomyces scabiei 87.22]  _lim(1-105(1500),105)
AVPEPDVPWLTIVHNDPVNLMSYVTYVFQAYFGYSKEKANKLMLDVHHKGRAVVSSGSREEMERD---------------------------------------------------VQAMHGYGLWATLQQDR-
>gi|146301250|Flavobacterium_johnsoniae|YP_001195841.1| ATP-dependent Clp protease adaptor protein ClpS [Flavobacterium johnsoniae UW101]  _lim(1-91(1500),91)
EKEAAVFNNEIIMYNDDVNTFDHVIDTLMRVCDHTAEQAEQCSLIVHYNGKCTVKTGPIEKLKPQ---------------------------------------------------CTQLLEAGLSAEI-----
>gi|21221363|Streptomyces_coelicolor|NP_627142.1| ATP-dependent Clp protease adaptor protein ClpS [Streptomyces coelicolor A3(2)]  _lim(1-105(1500),105)
AVPEPDVPWVTIVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMMDVHHKGRAVVSSGSREEMERD---------------------------------------------------VQAMHGYGLWATLQQDR-
>gi|110637456|Cytophaga_hutchinsonii|YP_677663.1| hypothetical protein CHU_1046 [Cytophaga hutchinsonii ATCC 33406]  _lim(1-99(1500),99)
EEVQTSDMNDLVVYNDDVNTFEHVIQVLMSVCGHSPEQAEQCTLLIHYKGKCTVKMGSLNELKPM---------------------------------------------------RQGICDKGISAEI-----
>gi|255530138|Pedobacter_heparinus|YP_003090510.1| ATP-dependent Clp protease adaptor protein ClpS [Pedobacter heparinus DSM 2366]  _lim(1-93(1500),93)
ILTSLKTIHRLILWNDDVNTFDHVIHCMMKYLDYSEHQAEKIAWEVHNKGKCAVLEGSFTEMEVY---------------------------------------------------RKILQQEGLTVTV-----
>gi|193215164|Chloroherpeton_thalassium|YP_001996363.1| ATP-dependent Clp protease adaptor protein ClpS [Chloroherpeton thalassium ATCC 35110]  _lim(1-103(1500),103)
VDTLTGDPYKVVLFNDDYHTFEEVIYQLMKATGCSRGKAEHHTWEVHNRGRSIVYDGDLMACVKV---------------------------------------------------SAVLEEIQLKTEIQTC--
>gi|120434799|Gramella_forsetii|YP_860485.1| ATP-dependent Clp protease adaptor protein [Gramella forsetii KT0803]  _lim(1-91(1500),91)
IKTKDKKENEIVLYNDDYNTFDHVIDTLIYACEHTPEQAEQCSILVHYKGKCTVKTGPYKELKPR---------------------------------------------------CSKLLDAGLSAEI-----
>gi|256425533|Chitinophaga_pinensis|YP_003126186.1| ATP-dependent Clp protease adaptor protein ClpS [Chitinophaga pinensis DSM 2588]  _lim(1-102(1500),102)
VAEDEQFPFSLIVWNDEVNTFDWVIQSLIEVCDHTQEQAEQCALIIHHNGKYAVKQGEFTRLRPM---------------------------------------------------CEALLDRGISATLEEAVE