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<channel>
<title>Protein Movie Generator RSS 2.0 Feed</title>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>
<description>PMG development and new utilities</description>
<lastBuildDate>Tue, 09 Oct 2007 11:19:00 GMT</lastBuildDate>
<language>en-us</language>
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			<title>PMG head</title>
			<link>http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMGdev</link>
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<item>
<title>News development</title>
<pubDate>Tue, 20 Nov 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>
<description>
&lt;table&gt;
&lt;tr&gt;&lt;td&gt;The javascript menu of the help pages were modify to avoid some 
display problems. Furthermore, we are currently working on the next release of PMG. The improvement consist in the use of 
a new molecular engine : VMD combined to the raytrcing engine Tachyon (see &lt;a href="http://www.ks.uiuc.edu/Research/vmd/minitutorials/tachyonao/"&gt;here&lt;/a&gt;) which permit to produce image with nice ambient occlusion effects. We are also working on a new type of backrgound using 3d structure of lipid bilayer for membrane binding protein.
&lt;/td&gt;
&lt;td&gt;
&lt;a href="vmd_tachyon_1CRN.png" target="_self"&gt;&lt;img src="vmd_tachyon_1CRN.png" width="200" height="200" border="0"&gt;&lt;/a&gt;
&lt;/td&gt;
&lt;td&gt;
&lt;a href="PMG_ext.png" target="_self"&gt;&lt;img src="PMG_ext.png" width="200" height="200" border="0"&gt;&lt;/a&gt;
&lt;/td&gt;
&lt;/tr&gt;
&lt;/table&gt;
</description>
</item>

<item>
<title>PMG v2.0 </title>
<pubDate>Wed, 17 Oct 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>
<description>
Release of  &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMG"&gt;PMG v2.0 &lt;/a&gt;, the principal new capabilitie is the use of the yasara engine, and also an update of the formular interface. The tutorial will be update accordingly.&lt;br /&gt;
The PMG v1.04 is still available  &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/pmg14/PMG"&gt;here &lt;/a&gt;
</description>
</item>


<item>
<title>PMG v2.0beta_2</title>
<pubDate>Wed, 03 Oct 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>
<description>New background types, and several bug fix in &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMGdev"&gt;PMGv2.0 beta&lt;/a&gt;. Thus, it is now possible to upload your own image for the background, here are several examples:&lt;br /&gt;
&lt;table&gt;
&lt;tr&gt;
    &lt;td&gt;t_neurone&lt;/td&gt;
    &lt;td&gt;image upload ex1&lt;/td&gt;
    &lt;td&gt;image upload ex2&lt;/td&gt;
    &lt;td&gt;image upload ex3&lt;/td&gt;
&lt;/tr&gt;
&lt;tr&gt;
&lt;td&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_neurone.png" height="200" width="200"/&gt;&lt;/td&gt;
&lt;td&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_im1.png" height="200" width="200"/&gt;&lt;/td&gt;
&lt;td&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_im2.png" height="200" width="200"/&gt;&lt;/td&gt;
&lt;td&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_im3.png" height="200" width="200"/&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;/table&gt;
&lt;br /&gt;
</description>
</item>

<item>
<title>PMG v2.0beta_1</title>
<pubDate>Tue, 04 Sep 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>Two new background were developed for the &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMGdev"&gt;PMGv2.0 beta&lt;/a&gt;, which are : t_shower and t_solvate (see &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/gallery.html"&gt;gallery&lt;/a&gt;, and list of &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/bg.html"&gt;background&lt;/a&gt;). Original scenes comes from &lt;a href="http://runevision.com/3d/"&gt;rune|vision&lt;/a&gt;.

&lt;table&gt;
&lt;tr&gt;
    &lt;td&gt;&lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/t_shower.gif"&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_shower.gif" width="200" height="200"/&gt;&lt;/a&gt;&lt;/td&gt;
    &lt;td&gt;&lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/t_solvate.gif"&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_solvate.gif" width="200" height="200"/&gt;&lt;/a&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;/table&gt;
</description>
</item>

<item>
<title>PMG v2.0beta online </title>
<pubDate>Fri, 31 Aug 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>Beta version of PMG v2.0 is online  &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMGdev"&gt;here&lt;/a&gt;. This update includes simplification of the interface and addition of an alternative molecular graphism engine: &lt;a href="http://www.yasara.org"&gt;YASARA&lt;/a&gt;.
</description>
</item>

<item>
<title>PMG v1.04 new background</title>
<pubDate>Fri, 29 Jun 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>New backgrounds were add : t_rcolumns, t_blood_1 and t_blood_2 (see &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/bg.html"&gt;here&lt;/a&gt; the available background in PMG). The t_rcolumns background doesn't work with the complex scenarii.&lt;br /&gt;
&lt;table&gt;
&lt;tr&gt;
    &lt;td&gt;&lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/t_columns.png"&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/t_columns.png" width="200" height="200"/&gt;&lt;/a&gt;&lt;/td&gt;
    &lt;td&gt;&lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/PMG_blood.png"&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/PMG_blood.png" width="200" height="200"/&gt;&lt;/a&gt;&lt;/td&gt;
    &lt;td&gt;&lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/PMG_blood2.png"&gt;&lt;img src="http://bioserv.rpbs.jussieu.fr/~autin/help/PMG_blood2.png" width="200" height="200"/&gt;&lt;/a&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;/table&gt;
</description>
</item>

<item>
<title>PMG v1.04 online</title>
<pubDate>Wed, 16 May 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>v1.04 is online, PMG v1.03 is still available here : &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMG3"&gt;PMG3&lt;/a&gt;. News in PMG v1.04:&lt;br /&gt;
* the animation grid now permits to define the position of object in the z-plane (rear, center or front)(&lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/zoom3cro.gif"&gt;example&lt;/a&gt;).&lt;br /&gt;
* two additional background (ready made scene), coming from &lt;a href="http://www.f-lohmueller.de/pov_tut/addon/insert0.htm"&gt;http://www.f-lohmueller.de/pov_tut/addon/insert0.htm&lt;/a&gt;, see &lt;a  href="http://bioserv.rpbs.jussieu.fr/~autin/help/bg.html"&gt;here&lt;/a&gt;.&lt;br /&gt;
</description>
</item>

<item>
<title>PMG published in NAR web service issue</title>
<pubDate>Wed, 09 May 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>PMG was published in Nucleic Acids Research, it is available &lt;a href="http://nar.oxfordjournals.org/cgi/content/abstract/gkm277?"&gt;here&lt;/a&gt; (advance access paper section), the full citation of PMG is :&lt;br /&gt;
&lt;a href="http://nar.oxfordjournals.org/cgi/content/abstract/gkm277?" target="_blank" style="color:black;font-weight:lighter"&gt;Ludovic Autin and Pierre Tuffery, PMG: online generation of high-quality molecular pictures and storyboarded animations,Nucleic Acids Research Advance Access published on May 3, 2007. doi:10.1093/nar/gkm277&lt;/a&gt;.
</description>
</item>

<item>
<title>PMG v1.03 online</title>
<pubDate>Fri, 09 Mar 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description> v1.03 is online, PMG v1.02 is still available here : &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMG2"&gt;PMG2&lt;/a&gt;. News in PMG v1.03:&lt;br /&gt;
 * Possibility to add a sub-title file (see &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/help/title.html"&gt;here&lt;/a&gt; details and example).&lt;br /&gt;
 * Improvement of the interface, and of the grid explanation.&lt;br /&gt;
</description>
</item>

<item>
<title>PMG v1.02 online</title>
<pubDate>Tue, 13 Feb 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>v1.02 online, improvement of the waiting page (job ranking info, stop rendering and image(s) peview possiblity). The PMG version 1.01 is still available here : &lt;a href="http://bioserv.rpbs.jussieu.fr/~autin/cgi-bin/PMG1"&gt;PMG1&lt;/a&gt;.
</description>
</item>

<item>
<title>PMG v1.02 online</title>
<pubDate>Wed, 31 Jan 2007 13:00:00 GMT</pubDate>
<link>http://bioserv.rpbs.jussieu.fr/PMG</link>

<description>
 - January 2007: camera and lighting facilities added by Ludovic Autin.&lt;br /&gt;
 - December 2006: more scenarii and animation facilities by Ludovic Autin.&lt;br /&gt;
 - Late November 2006: Full production release, version 1.0. Temporary invalidation of dino only rendering.&lt;br /&gt;
 - November 2006: many improvements by Ludovic Autin.&lt;br /&gt;
 - October 2006: first implementation by Ludovic Autin and Pierre Tuffery.&lt;br /&gt;
 - Late september 2006: proof of concept involving dino, povray.&lt;br /&gt;
 - September 2006: First implementation of the "animation grid", mimicking a grid on the scene to position moving objects.&lt;br /&gt;
 - June-August 2006: Independant branch from the &lt;a href="http://bioserv.rpbs.jussieu.fr/cgi-bin/PPG"&gt;Protein Picture Generator&lt;/a&gt;. Specification on how to define animations from a form.&lt;br /&gt;
</description>
</item>

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