>gi| /home/andreani/potential/BENCHMARK/BM4/SCORE_DECOYS_15deg/2J7P/complex.1.pdb A 294|PDB|input MFQQ-LSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESL---------TPAEVILATVYEALKEALG-GE----------ARLPVLK-D-RNLWFLVGLQGSGKTTTAAKLALYY---------KGK-GRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGE----------------SPESIRRRVEE--KARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEG--LEPFYPERLAGRILGM >gi|46198982|Thermus_thermophilus|YP_004649.1| signal recognition particle protein ffh [Thermus thermophilus HB27] _lim(1-434(1500),434) MFQQ-LAARLQEAIDRLRGRGRITEEDLKGTLREIRRALIEADVNLEVARAFVEEVRERALGRKVLESL---------TPAEVVLATVYEALKEALG-GE--------P-KHPQLKD---RNVWFLVGLQGSGKTTTAAKLALYY---------KGK-GRRPLLVAADTQRPAAREQLRVLGEKVGVPVLEVQDGE----------------SPESIRRRVEE--RARLEVRDLVLVDTAGRLQIDERLMEELVRLKAALRPDEVLLVLDAMTGQEALSVAQAFDERVGVTGLVLTKLDGDARGGAALSARRVTGKPIYFAGVSERPEG--LEPFYPDRLAGRILGM >gi|15806836|Deinococcus_radiodurans|NP_295559.1| signal recognition particle protein [Deinococcus radiodurans R1] _lim(1-452(1500),452) MFES-LGNKLQDILEKLGRERQLTEAQVKASMREIRMALLEADVNFGVAKDFVARVSEQAVGQQVLGSL---------NAGQTVIKLVHDELVQTLG-GE--------S-AQPSLDK-K-NNVWFMVGLQGAGKTTSSGKLAAHY---------KKL-GRKVLLVAADTQRPAARDQLEVLSKQVGVPVLKVNDGE----------------SPAETKARIEE--HLARDPRDLVIVDTAGRLQIDEGLMNQLAALKAELQPTETLLVVDAMTGQEALNVAQAFDERIGVSGLIMTKMDGDARGGAALSARSVTGKPIYFAGVSEKLSG--LEPFYPDRVAGRILGM >gi|94985540|Deinococcus_geothermalis|YP_604904.1| signal recognition particle protein [Deinococcus geothermalis DSM 11300] _lim(1-450(1500),450) MFEA-LGNKLQDILDRIGRESKLTDAQVKAAMREIRMALLEADVNFNVAKDFVAKVSEKAVGQEVVGSL---------TAGQTVVKLVHDELIETLG-GE--------A-RQPTLKN-D-GNVWFMVGLQGAGKTTSAGKLAAFY---------KSK-GRRVLLVAADTQRPAARDQLEVLAKQVGVPVLKVKDGE----------------TPQETKRRLDE--YLKTDYRDLVIVDTAGRLQIDEALMDQLAALQAELQPTETLLVVDAMTGQEALNVARVFDERVHLSGLIITKMDGDARGGAALSARSVTGKPIYFAGVSEKLTG--LEPFYPDRVAGRILGM >gi|226356240|Deinococcus_deserti|YP_002785980.1| signal recognition particle protein [Deinococcus deserti VCD115] _lim(1-446(1500),446) MFEA-LGNKLQDILDRVGRESKLTEAQVKAAMREIRMALLEADVNFGVAKDFVARVSEKAVGQEVLGSL---------NAGQTVVKLVHDELIETLG-GK--------A-AQPELKS-E-GNVWFMVGLQGAGKTTSTGKLAAHY---------KSK-GRRVLLVAADTQRPAARDQLEVLAKQVGVPVLKVNDGE----------------TPQETRRRLDE--HLKTDFRDLVIVDTAGRLQIDEALMDQLANLQSELQPTETLLVVDAMTGQEALNVAQTFDQRVNLSGLVVTKMDGDARGGASLSARSVTGKPIYFAGTSEKLTG--LEPFYPDRVAGRILGM >gi|15675165|Streptococcus_pyogenes|NP_269339.1| putative signal recognition particle [Streptococcus pyogenes M1 GAS] _lim(1-519(1500),519) AFES-LTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTL---------DPTQQILKIVNEELTSILG-SE--------T-AEIDKSP-KIPTIIMMVGLQGAGKTTFAGKLANKL---------IKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDH----------------SAVDIVRKGLE--QARENHNDYVLIDTAGRLQIDEKLMGELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITD--IETFHPDRMSSRILGM >gi|15903209|Streptococcus_pneumoniae|NP_358759.1| signal recognition particle protein [Streptococcus pneumoniae R6] _lim(1-523(1500),523) AFES-LTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTL---------NPAQQIIKIVDEELTAVLG-SD--------T-AEIIKSP-KIPTIIMMVGLQGAGKTTFAGKLANKL---------KKEENARPLMVAADIYRPAAIDQLKTLGQQIDVPVFALGTEV----------------PAVEIVRQGLE--QAQTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITD--IETFHPDRMSSRILGM >gi|125717990|Streptococcus_sanguinis|YP_001035123.1| SRP54, signal recognition particle GTPase protein, putative [Streptococcus sanguinis SK36] _lim(1-524(1500),524) AFES-LTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTL---------NPAQQIIKIVDEELTTILG-SD--------T-AEIIKSP-KIPTIIMMVGLQGAGKTTFAGKLANKL---------KKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEV----------------PAVEIVRQGLE--QAKANHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITD--IETFHPDRMSSRILGM >gi|157150208|Streptococcus_gordonii|YP_001450412.1| signal recognition particle protein [Streptococcus gordonii str. Challis substr. CH1] _lim(1-524(1500),524) AFES-LTERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTL---------NPAQQIIKIVDEELTTILG-SD--------T-AEIIKSP-KIPTIIMMVGLQGAGKTTFAGKLANKL---------KKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEV----------------PAVEIVRQGLE--QAKTNHNDYVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLEVTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITD--IETFHPDRMSSRILGM >gi|42519388|Lactobacillus_johnsonii|NP_965318.1| signal recognition particle protein [Lactobacillus johnsonii NCC 533] _lim(1-476(1500),476) AFEN-LSERLQKALKNLTGKGKISEADINDASREIRLALLEADVNFKVVKDFIKKIKKEALGKEVQDSL---------NPGQQIIKIVDDELTKMMG-EE--------A-VSLNKSP-HIPTIIMMVGLQGTGKTTTVGKLANYL---------MKNEKARPLLIAGDIYRPAAIEQLKQIGQQLDVPVYSEDNQ-----------------DVAEIVKHGLE--EADKNKNDYVLIDTAGRLEIDEQLMDELKRVTEVAHPDNTLLVVDAMTGQAATQVAEGFNNDLDLTGIVLTKLDGDTRGGAALSIRAVTGLPIIFTGQGEKLTD--LSTFHPDRMASRILGM >gi|58337566|Lactobacillus_acidophilus|YP_194151.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM] _lim(1-476(1500),476) AFEN-LSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEALGKEVQESL---------NPGQQVIKIVNEELTKMMG-EE--------A-VPLNKSK-HIPTIIMMVGLQGTGKTTTVGKLAYHL---------QKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSENGEK----------------DVAKIVQDGLA--EADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVADPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSD--LDVFHPDRMASRILGM >gi|161507707|Lactobacillus_helveticus|YP_001577663.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571] _lim(1-476(1500),476) AFEN-LSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEALGKEVQESL---------NPGQQVIKIVNEELTKMMG-EE--------A-VPLNKSK-HIPTIIMMVGLQGTGKTTTVGKLAYHL---------QKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEK----------------DVAKIVQDGLA--EADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQPDNILLVVDAMTGQAATDVAKGFDERLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSD--LDIFHPDRMASRILGM >gi|148270357|Thermotoga_petrophila|YP_001244817.1| signal recognition particle protein [Thermotoga petrophila RKU-1] _lim(1-433(1500),433) MFEN-LQEKLSRVFKNLSGRGKITEKNVKDAIREVKLSLLEADVNYKVVKEFVDHVLQKALGEEVLRSL---------TPDQQFIKIVRDELVRIMG-EK--------N-EPLRLVH-R-PAPIMMVGLQGSGKTTTCAKLAKLL---------KKE-GRNPLLVAADLYRPAAVDQLVKLGNQIGINVVHDYNK-----------------TPVEIVKEAVD--VAESTGKDILIVDTAGRLHIDEEMMKELEEIKKILNPDEILLVVDAMMGQDAVNTAKVFDERLDLTGFVVTKMDGDARGGVILSIKYVTGKPVKFIGTSEKIDG--LEPFHPDRIANRILGM >gi|163847609|Chloroflexus_aurantiacus|YP_001635653.1| signal recognition particle protein [Chloroflexus aurantiacus J-10-fl] _lim(1-450(1500),450) MFES-LSDRLQAVFQKLGSKGRLTEDDVREAMKQVRLALLEADVNFRVVKEFVAKVTEQAIGEEVTKSL---------TPHQQVIKIVHQELINLLG-TE--------N-VPLQEAR-PGPTVIMLVGLQGTGKTTLAAKLALHL---------RKK-GKRVLLVAADVYRPAAITQLQALGRQLNIPVYSEGTQA----------------SPPDIAEHALE--HARKELFNVVIIDTAGRLQIDEPLMQELEQIENRVHPIERLLVVDAMTGQEAVRVAETFNQRVKLTGVVMTKMDGDARGGAALSVRAVTGVPIKFLSTGEKVDGNTLEVFHPDRLASRILGM >gi|197119794|Geobacter_bemidjiensis|YP_002140221.1| signal recognition particle protein [Geobacter bemidjiensis Bem] _lim(1-453(1500),453) MFAT-LSDKLDLVFKKLRGQGVMTEENVKDALREVRLALLEADVNFKVVKEFVEKVRGRAVGTEVLQSL---------APGQQVIKIVHDELVLLMG-GE--------EDNSLDLAA-KPPVAIMLVGLQGAGKTTSCGKLAKFL---------KAQ-RKKPLLVPADVYRPAAIEQLKVLGRQLDIEVFGSEATQ----------------KPLEICRAAHR--YATLNGFDVVIFDTAGRHQIDDYLMNELEGIRDELAPREILFVADAMTGQEAVNVASGFNDRLGITGVILTKLDGDAKGGAALSIKAVTGKPVKFVGLGEKLDA--LDVFHADRLVSRILGM >gi|257066792|Anaerococcus_prevotii|YP_003153048.1| signal recognition particle protein [Anaerococcus prevotii DSM 20548] _lim(1-445(1500),445) VFEG-LSERLQETLGKLTGKGKLSEKDIDAAMREIRLSLLEADVNYKVVKDFVKTIKERSLGQDVMTSL---------SPGQMVVKIVNEELTALMG-KE--------N-SKLDLKG-STPHMVMMVGLQGSGKTTHSGKLALKL---------KKE-NRNPMLTALDIYRPAAIEQLKVVGKTAGVEVFDKDKQ-----------------DPVKTAREAKD--YARLNNHDVVILDTAGRLQIDTDLMDELKNIKEAVNPDEILLVVDAMTGQEAVNVAKTFDDYLDITGVVLTKLDGDARGGAALSIRQVVGKPIKFIGVGEKLED--LEPFHPDRMANRILGM >gi|258511333|Alicyclobacillus_acidocaldarius|YP_003184767.1| signal recognition particle protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] _lim(1-479(1500),479) MFES-LSNNLQAVFQRLRGRGRLTEADVDEAMREIRRALLAADVNVKVVRDFVDRVRARAVGQDVLKSL---------TPGQQVVKIVYEELTELMG-GS--------Q-ARIRMAP-KPPTVVMLVGLQGAGKTTTAAKLALAF---------HQQ-NHRPLLVAADVYRPAAVDQLKVLGAQIDVPVFSLDGA-----------------GAVEIAEAGLR--DAERRGADVVIVDTAGRLHIDDALMAELESMKKILEPHEILLVVDAMTGQDAVHVAEAFHQRLEVTGVILTKLDGDARGGAALTVRAATGCPIKFVGMGEKIEP--LEPFHPERMASRILGM >gi|83589815|Moorella_thermoacetica|YP_429824.1| signal recognition particle subunit FFH/SRP54 (srp54) [Moorella thermoacetica ATCC 39073] _lim(1-447(1500),447) VFAS-LADKLQETFKKLRGKGKLTEADVTAAMREIRLALLEADVNFKVVKDFVNRVKERAVGQEVMQSL---------TPGQQVVKIVHEELTALMG-GG--------E-SKINWAS-QPPTVIMLAGLQGAGKTTTAAKLARLA---------QNQ-GRRPLLVAADVYRPAAIKQLQVLGEQLKVPVFSMGEGS----------------SPVDIARAAVE--HARTHGSNPVILDTAGRLHINETMMAELAAIKEAVRPQEILLVVDAMTGQDAVQVASTFHQQLGLTGVILTKLDGDTRGGAALSIRAVTGCPIKFIGMGEKTEA--LETFHPDRLASRILGM >gi|114567018|Syntrophomonas_wolfei|YP_754172.1| signal recognition particle protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] _lim(1-448(1500),448) AFEG-LSDRLQDIFKKLRGKGKIGEEDIKTAMREVRLALLEADVNFKVVKDFVERVRQRAIGQEVLQSL---------TPGQQIIKVVHDEMTALMG-GS--------E-SKLTLAA-KPPSIYMLVGLQGAGKTTTVAKLGRNL---------LRQ-GRRPVLVAGDIYRPAAIKQLQVLGEQVGIPVFSMGQS-----------------NPVDIARASLE--YARSQNRDIVILDTAGRLHINEELMDELKQIKSAINPHEILLVVDAMTGQDAVNVAESFNRDLGLTGVILTKLDGDTRGGAALSVKAVTGCPIKYVGMGEKLDA--LETFFPDRMASRILGM >gi|78042676|Carboxydothermus_hydrogenoformans|YP_360266.1| signal recognition particle protein [Carboxydothermus hydrogenoformans Z-2901] _lim(1-446(1500),446) VFEN-LSNKLQEVFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVKDFIAKVKEKAVGHEVLESL---------TPGQQVIKIVHEELINLMG-KT--------N-AKLNDAG-SPPTIIMLVGLQGAGKTTTAAKLAYLL---------KKQ-GKKPLLVAADVYRPAAIKQLQVLGDTIDVPVFTMGEQ-----------------SPVDIAKASIN--FAKSNLKNYVIIDTAGRLHINEELMDELKKIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELGLTGVILTKLDGDTKGGAALSVKAVTGCPIKFAGMGEKIEN--LEPFYPDRMASRILGM >gi|226313205|Brevibacillus_brevis|YP_002773099.1| signal recognition particle protein fifty-four homolog [Brevibacillus brevis NBRC 100599] _lim(1-470(1500),470) AFES-LANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERAVGQEVMKSL---------TPGQMVIKIVNEELVALMG-GN--------V-AQLTMAH-RPPTVIMMAGLQGAGKTTTTGKLAKYL---------QKQ-NRKPLLVAGDIYRPAAIKQLQVLGEQLNVPVFTLGDQV----------------SPVEIARQAIE--HAKTNHLDVVLIDTAGRLHIDEALMDELKQIREVTKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDA--LEPFHPDRMASRILGM >gi|73662841|Staphylococcus_saprophyticus|YP_301622.1| signal recognition particle [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] _lim(1-455(1500),455) AFEG-LSDRLQGTMQKIRGKGKVTEADIKLMMREVRLALLEADVNFKVVKDFVKTVSDRALGSDVMKSL---------TPGQQVIKIVQEELTQLMG-GE--------N-STITMAN-KPPTVVMMVGLQGAGKTTTAGKLALLM---------RKKYNKKPMLVAADIYRPAAIDQLQTVGKQIDIPVYSEGDQV----------------KPQQIVENAIK--HAKEEHLDFVIIDTAGRLHVDEALMQELSDVKEITKPDEIMLVVDAMTGQDAVNVAQSFDEQLEVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDG--LEPFHPERMASRILGM >gi|46908032|Listeria_monocytogenes|YP_014421.1| signal recognition particle protein [Listeria monocytogenes str. 4b F2365] _lim(1-450(1500),450) AFEG-LAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKQFIKTVSERAVGADVMKSL---------TPGQQVIKIVQEELTSLMG-GE--------E-SKIGTAD-RPPTVIMMVGLQGAGKTTTSGKLANLL---------RKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQV----------------SPVEIAKQAIA--KAKEEHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEILLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIATGEKMEA--LETFHPDRMASRILGM >gi|15615047|Bacillus_halodurans|NP_243350.1| signal recognition particle [Bacillus halodurans C-125] _lim(1-451(1500),451) AFES-LAERLQDTLKKIRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKQFIANVKEKALGQEVMKSL---------TPGQQVIKVVNEELTALMG-GE--------Q-SKIAVAS-KPPTVVMMVGLQGAGKTTTTAKLANHL---------RKKHNRNPILVAADIYRPAAIKQLETLGKQLNMPVFSLGDQV----------------SPVEIAKQAIE--RAKEEHHDYVLIDTAGRLHIDEELMDELQQVKEVAKPDEILLVVDAMTGQDAVNVAESFHEQLDVSGVVLTKLDGDTRGGAALSVKAVTNTPIKFAGMGEKIDQ--LEPFHPERMASRILGM >gi|163941583|Bacillus_weihenstephanensis|YP_001646467.1| signal recognition particle protein [Bacillus weihenstephanensis KBAB4] _lim(1-449(1500),449) AFEG-LADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVGQDVMKSL---------TPGQQVIKIVQEELTELMG-GE--------Q-SKIAVAN-KPPTVIMMVGLQGAGKTTTTGKLANLL---------RKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQV----------------SPVEIAKQAIA--KAKEDHHDYVLIDTAGRLHIDEELMGELAKVKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDA--IEAFHPERMASRILGM >gi|152976211|Bacillus_cytotoxicus|YP_001375728.1| signal recognition particle protein [Bacillus cereus subsp. cytotoxis NVH 391-98] _lim(1-449(1500),449) AFEG-LADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVGQDVMKSL---------TPGQQVIKVVQEELTGLMG-GE--------Q-SKIAVAN-KPPTVIMMVGLQGAGKTTTTGKLANLL---------RKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQV----------------SPVEIAKQAIA--KAKEEHHDYVLIDTAGRLHIDEELMDELAKVKEVANPDEIFLVVDAMTGQDAVNVAKSFHEQLGLTGVVLTKLDGDTRGGAALSIKAVTNTPIKFAGMGEKLDA--IEPFHPERMASRILGM >gi|239826589|Geobacillus_sp.|YP_002949213.1| signal recognition particle protein [Geobacillus sp. WCH70] _lim(1-446(1500),446) AFEG-LSERLQNVMNKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERAVGQEVLKSL---------TPGQQVIKVVKEELTELMG-GE--------Q-SKIAVAS-RPPTVIMMVGLQGAGKTTTTGKLANLL---------RKRYNRKPLLAAADIYRPAAIKQLETLGKQLNMPVFSLGDQV----------------SPVEIAKQAIE--KAKEEHYDYVLIDTAGRLHIDETLMDELKQMKEVAKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTNTPIKFVGMGEKLDA--LEPFHPERMASRILGM >gi|56419731|Geobacillus_kaustophilus|YP_147049.1| signal recognition particle GTPase [Geobacillus kaustophilus HTA426] _lim(1-446(1500),446) AFEG-LSERLQQVMNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIRQVSERAVGQEVMKSL---------TPGQQVIKIVKEELTALMG-GE--------Q-SQIAVAK-KPPTVVMMVGLQGAGKTTTTGKLANLL---------RKRHNRKPLLVAADVYRPAAIKQLETLGKQLDMPVFSLGEHA----------------NPVEIAKQALE--RAKEEHYDYVLIDTAGRLHIDEALMDELKQMKEAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPIKFAGMGEKLDA--LEPFHPERMASRILGM >gi|138894717|Geobacillus_thermodenitrificans|YP_001125170.1| Signal recognition particle subunit Ffh/SRP54 [Geobacillus thermodenitrificans NG80-2] _lim(1-455(1500),455) AFEG-LSERLQHVMNRIRGKGKVTEADVKEMMREVRLALLEADVNFKVVKDFIKRVSERAVGQEVLKSL---------TPGQQVIKVVKEELTALMG-GE--------Q-SKIAVAK-KPPTVVMMVGLQGAGKTTTTGKLANLL---------RKRHNRKPLLVAADVYRPAAIKQLETLGKQLNMPVFSLGEHA----------------NPVEIAKQALE--RAKEEHHDYVLIDTAGRLHVDEALMDELKQMREAVKPDEIFLVVDAMTGQDAVNVAQSFHEQLGITGVILTKLDGDTRGGAALSIRAVTGAPIKFVGMGEKLDA--LEPFHPERMASRILGM >gi|167037689|Thermoanaerobacter_pseudethanolicus|YP_001665267.1| signal recognition particle protein [Thermoanaerobacter pseudethanolicus ATCC 33223] _lim(1-446(1500),446) AFES-LSERLQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL---------TPGQQVIKIVNDELIALMG-ST--------Q-SRLNIGN-KVPAVIMMVGLQGSGKTTACGKLANLL---------KKQ-GKNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKV----------------NPVDIAKASID--YARSHNSDVIIIDTAGRLHIDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGGAALSIKAVTQKPIKYVGTGEKLTD--LEPFYPDRMASRILGM >gi|125973288|Clostridium_thermocellum|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium thermocellum ATCC 27405] _lim(1-446(1500),446) LFEG-LSGKLQEAMKKLRGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIGKVSERAVGQEVLESL---------TPGQQVIKIVHEELINLMG-SA--------N-SKVTFSS-KPPTIYMMVGLQGSGKTTTSGKLANLL---------RKQ-GKKPLLVACDVYRPAAIKQLQVVGSQLGIEVFSMGDKT----------------NPVDIAKAAVE--YAKSRQYDLVIIDTAGRLHINEELMEELQNIKEAVRPQEILLVVDSMTGQDAVNVAESFNEKLGVDGIILTKLDGDTRGGAALSVKAVTGKPIKFIGMGEKLND--IEPFFPDRMASRILGM >gi|218710520|Vibrio_splendidus|YP_002418141.1| Signal recognition particle protein [Vibrio splendidus LGP32] _lim(1-470(1500),470) MFDN-LTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKRVKEGAVGVEVSKSL---------TPGQEFIKIVQAELEAVMG-ES--------N-EALDLAA-QPPAVILMAGLQGAGKTTSVGKLSKLL---------TERDKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSSADQ----------------KPLDIANAAID--HAKKKFYDVLIVDTAGRLAIDEEMMGEIKELHTAIKPVETLFVVDAMTGQDAANTAKAFGDTLPLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDA--LEPFHPDRVASRILGM >gi|28899308|Vibrio_parahaemolyticus|NP_798913.1| signal recognition particle protein [Vibrio parahaemolyticus RIMD 2210633] _lim(1-460(1500),460) MFEN-LTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVREFVNRVKEKAVGVEVSKSL---------TPGQEFIKIVQAELEAVMG-ES--------N-EALNLAA-QPPAVLLMAGLQGAGKTTSVGKLSKLL---------KERDKKKVLVVSADVYRPAAIKQLETLASDIGVDFFPSSPDQ----------------KPLDIANAAID--HAKKKFYDVLIVDTAGRLAIDEEMMGEIKDLHSAINPVETLFVVDAMTGQDAANTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDA--LEPFHPDRVASRILGM >gi|197335050|Aliivibrio_fischeri|YP_002155306.1| signal recognition particle protein [Vibrio fischeri MJ11] _lim(1-457(1500),457) MFDN-LTDRLSRTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKRVKEGAVGVEVSKSL---------TPGQEFIKIVQAELEAVMG-DS--------N-EALNLAC-QPPAVILMAGLQGAGKTTSTGKLAKLL---------KERDKKKVLVVSADVYRPAAIKQLETLATDVDVDFFPSSADQ----------------KPIDIVDAAIS--HAKLKFFDVVIVDTAGRLAVDTEMMDEIKQLHAHVNPIETLFVVDAMTGQDAANTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPVKFLGVGEKTDA--LEPFHPERIASRILGM >gi|91794106|Shewanella_denitrificans|YP_563757.1| signal recognition particle protein [Shewanella denitrificans OS217] _lim(1-457(1500),457) MFEN-LTDRLSRTLKNISGRGRLTDDNIKETLREVRMALLEADVALPVVREFVNSVKERAVGQEVSKSL---------SPGQAFIKIVQSELEKAMG-ES--------N-EALDLAA-IPPAVIMMAGLQGAGKTTSVAKLGKLL---------RTRHKKSVLVVSADVYRPAAIKQLETLAAEVEVEFFPSDVSQ----------------KPLDIAKAAIA--HAKLKFIDVVIVDTAGRLHVDEAMMDEIKQLHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRNITGKPIKFLGVGEKTDA--LEPFHPDRIASRILGM >gi|114564085|Shewanella_frigidimarina|YP_751599.1| signal recognition particle protein [Shewanella frigidimarina NCIMB 400] _lim(1-457(1500),457) MFEN-LSDRLSRTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFVNSVKERAVGQEVSKSL---------SPGQAFIKIVQNELEKAMG-EA--------N-EALDLAA-IPPAVIMMAGLQGAGKTTSVAKLGKFL---------RTRHKKSVLVVSADVYRPAAIKQLETLATEVEVEFFPSDVSQ----------------KPVDIAKAAIN--YAKLKFIDVVIVDTAGRLHVDEAMMDEIKQLHATVNPVETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRSITGKPIKFLGVGEKTDA--LEPFHPDRIASRILGM >gi|24372934|Shewanella_oneidensis|NP_716976.1| signal recognition particle protein [Shewanella oneidensis MR-1] _lim(1-457(1500),457) MFEN-LTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAVGQEVAKSL---------SPGQAFIKIVQSELEKSMG-EA--------N-QALDLAT-QPPAVVMMAGLQGAGKTTSVAKLGKLL---------RTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQ----------------KPIDIAKAAIA--HAKLKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDA--LEPFHPDRIASRILGM >gi|125996652|Shewanella_baltica|ABN60727.1| signal recognition particle subunit FFH/SRP54 (srp54) [Shewanella baltica OS155] _lim(1-478(1500),478) MFEN-LTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAVGQEVSKSL---------SPGQAFIKIVQSELEKSMG-EA--------N-EALDLAT-QPPAVIMMAGLQGAGKTTSVAKLGKFL---------RERHKKSVLVVSADVYRPAAIKQLETLAQEVAVEFFPSDVSQ----------------KPIDIAKAAIA--HAKLKFIDVVILDTAGRLHVDEAMMDEIKGLHAAVKPIETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDA--LEPFHPDRIASRILGM >gi|157960876|Shewanella_pealeana|YP_001500910.1| signal recognition particle protein [Shewanella pealeana ATCC 700345] _lim(1-457(1500),457) MFEN-LTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNSVKERAVGQEVSKSL---------SPGQAFIKIVQSELENAMG-EA--------N-EALDLSA-QPPAVIMMAGLQGAGKTTSVAKLSKFL---------REREKKSVLVVSADVYRPAAIKQLETLAAEVDVQFFPSDVSQ----------------KPVDIANAAIA--HAKLKFIDVVIVDTAGRLHVDEAMMDEIKELHAAVKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDA--LEAFHPDRVASRILGM >gi|127511995|Shewanella_loihica|YP_001093192.1| signal recognition particle protein [Shewanella loihica PV-4] _lim(1-457(1500),457) MFEN-LTDRLSRTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVRAFVNSVKDRAVGQEVTKSL---------SPGQAFIKIVQSELENAMG-EA--------N-EALNLSA-QPPAVIMMAGLQGAGKTTSVAKLSKFL---------RERQKKSVLVVSADVYRPAAIKQLETLANEVEVEFFPSDVSQ----------------KPIDIVDAAMA--HAKLKFIDVVIVDTAGRLHVDESMMDEIKALHAAVKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDA--LEPFHPDRVASRILGM >gi|170725614|Shewanella_woodyi|YP_001759640.1| signal recognition particle protein [Shewanella woodyi ATCC 51908] _lim(1-457(1500),457) MFEN-LTDRLSRSLKNISGRGRLTEDNVKETLREVRMALLEADVALPVVRDFVNSVKERAVGQEVSKSL---------SPGQAFIKIVQSELENAMG-EA--------N-EALDLSA-QPPAVIMMAGLQGAGKTTSVAKLSKFL---------REREKKSVLVVSADVYRPAAIKQLETLATEVEVEFFPSDVSQ----------------KPIDIVNAAMA--HAKLKFIDVVIVDTAGRLHVDESMMDEIKALHAAVNPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDA--LEPFYPDRVASRILGM >gi|145297735|Aeromonas_salmonicida|YP_001140576.1| signal recognition particle protein [Aeromonas salmonicida subsp. salmonicida A449] _lim(1-459(1500),459) MFEN-LTERLSRTLRNVSGRGRLTEENIKDTLREVRMALLEADVALPVVRDFVARVKERAVGQEVAKSL---------SPGQAFIKIVHGELVSVMG-EA--------N-EQLNLAA-QPPVIILMAGLQGAGKTTTVGKLAKLL---------KERSKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSDASQ----------------KPVDIATAAID--QARKKFYDVVIVDTAGRLHVDSDMMDEIIHLHATIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKADGDARGGAALSVRHITGKPVKFIGMGEKTDA--LEPFHPDRLASRILGM >gi|170025580|Yersinia_pseudotuberculosis|YP_001722085.1| signal recognition particle protein [Yersinia pseudotuberculosis YPIII] _lim(1-453(1500),453) MFEN-LTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAVGHEVNKSL---------TPGQEFVKIVKNELISAMG-EV--------N-NELNLAA-QPPAVVLMAGLQGAGKTTSVAKLGKFL---------KEKQKKKVLIVSADVYRPAAIKQLETLAQGVGIDFFPSDAQE----------------KPIDIVNRALQ--QAKLKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDA--LEPFHPDRIASRILGM >gi|157369096|Serratia_proteamaculans|YP_001477085.1| signal recognition particle protein [Serratia proteamaculans 568] _lim(1-453(1500),453) MFEN-LTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKESAVGHEVNKSL---------TPGQEFVKIVKSELISAMG-EV--------N-TELNLAA-QPPAVVLMAGLQGAGKTTSVAKLGKFL---------KEKQKKKVLVVSADVYRPAAIKQLETLAESVGIDFFPSDVKE----------------KPIDIVNRALQ--QAKLKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEA--LEPFHPDRVASRILGM >gi|253689573|Pectobacterium_carotovorum|YP_003018763.1| signal recognition particle protein [Pectobacterium carotovorum subsp. carotovorum PC1] _lim(1-453(1500),453) MFEN-LTDRLSRTLRNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFINRVKERAVGHEVNKSL---------TPGQEFVKIVKNELVSAMG-EI--------N-AELNLAA-QPPAVVLMAGLQGAGKTTSVGKLGKFL---------REKQKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVQE----------------KPLAIVERALQ--HAKLKFYDVLLVDTAGRLHVDDAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTEA--LEPFYPERVASRILGM >gi|152971460|Klebsiella_pneumoniae|YP_001336569.1| signal recognition particle protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] _lim(1-454(1500),454) MFDN-LTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFISRVKESAVGHEVNKSL---------TPGQEFVKIVRNELVAAMG-EE--------N-QTLDLAA-QPPAVVLMAGLQGAGKTTSVGKLGKFL---------REKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQ----------------KPVDIVNAALK--EAKLKFYDVLLVDTAGRLHVDEAMMDEIKHVHAAINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEA--LEPFHPDRVASRILGM >gi|253990679|Photorhabdus_asymbiotica|YP_003042035.1| signal recognition particle protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] _lim(1-453(1500),453) MFDN-LTDRLSRTLRNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFISCVKESAVGHEVNKSL---------TPGQEFVKIVQNELVKAMG-EV--------N-SELNLST-QTPAVVLMAGLQGAGKTTSVAKLGNFL---------KGRQKKKVLVVSADVYRPAAIKQLETLAQTVGIDFFPSDAQE----------------KPVDIVMKAVQ--HAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHEIINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDA--LEPFHPDRIASRILGM >gi|219871638|Haemophilus_parasuis|YP_002476013.1| signal recognition particle GTPase [Haemophilus parasuis SH0165] _lim(1-460(1500),460) MFEN-LSDRLSKTLKNITGKGRLTEDNIKDTLREVRIALLEADVALPVVREFINKVKERAIGEEVNKSL---------TPGQEFLKIVQAELEKAMG-EA--------N-EGLNLAT-QPPAVILMAGLQGAGKTTSVGKLAKFL---------KERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFFPTETSQ----------------KPVDIAEAALK--HAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHSVLNPIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTDA--LEPFHPDRIASRILGM >gi|126209206|Actinobacillus_pleuropneumoniae|YP_001054431.1| signal recognition particle protein (sigma-54 like protein) [Actinobacillus pleuropneumoniae L20] _lim(1-463(1500),463) MFEN-LSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVALPVVREFINKVKERALGTEVNKSL---------TPGQEFLKIVQSELEIAMG-EA--------N-EELNLAT-QPPAVILMAGLQGAGKTTSVGKLAKFL---------KERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFFPTETTQ----------------KPVEIAELALK--YAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHRVLNPIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTDA--LEPFHPDRVASRILGM >gi|167032079|Pseudomonas_putida|YP_001667310.1| signal recognition particle protein [Pseudomonas putida GB-1] _lim(1-458(1500),458) MFEN-LTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAVGTEVSRSL---------TPGQAFVKIVQAELESLMG-AA--------N-EDLALNA-APPAVVLMAGLQGAGKTTTAGKLARFL---------KERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQ----------------KPVAIAEAAIR--EAKLKFIDVVIVDTAGRLHIDADMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFGEALPLTGVVLTKVDGDARGGAALSVRAITGKPIKFIGMGEKTEA--LEPFHPDRVASRILGM >gi|66044529|Pseudomonas_syringae|YP_234370.1| Signal recognition particle protein [Pseudomonas syringae pv. syringae B728a] _lim(1-458(1500),458) MFEN-LTDRLSQTLRHVTGKAKLNEDNIKDTLREVRMALLEADVALPVVKDFVNNVKERAVGTEVSRSL---------TPGQAFVKIVQAELESLMG-AA--------N-EDLVLNV-TPPAVILMAGLQGAGKTTTAGKLARFL---------KERKKKTVMVVSVDVYRPAAIKQLETLANDIGVTFFASDISQ----------------KPVDIAQAAIK--EARLKFIDVVIVDTAGRLHVDVEMMGEIQALHAAVKPAETLFVVDAMTGQDAANTAKAFGDALPLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEA--LEPFHPDRIASRILGM >gi|84622872|Xanthomonas_oryzae|YP_450244.1| signal recognition particle protein [Xanthomonas oryzae pv. oryzae MAFF 311018] _lim(1-458(1500),458) MFES-LTQRLSGTMERLRGRGRLTEENIREATREVRIALLEADVALPVVQALIERIKVRAVGQEVLKSL---------TPGQALIKIVRDELTAVMG-AA--------A-ADVNLNV-PAPAIVLMAGLQGAGKTTTVGKLAKHL---------KEKRKKKVMVVSADVYRPAAIEQLKTLAEQVGVLFFASDASQ----------------KPVDIVRAAIS--DARKSFVDVLLVDTAGRLAIDQVMMDEIKALHAAVNPTETLFVVDAMTGQDAANTAKAFGEALPLTGVVLTKTDGDARGGAALSVRYITGKPIKFVGTGEKTDG--LDVFHPDRVASRILDM >gi|161870769|Neisseria_meningitidis|YP_001599942.1| signal recognition particle protein [Neisseria meningitidis 053442] _lim(1-456(1500),456) MLDN-LTGRFSNVLKNIRGQAKLTEDNIKEALREVRLALLEADVALPVVKEFVNNVKEKALGQEVAGSL---------TPDQAFIGVVNKALTELMG-RE--------N-KTLDLSV-APPAVVLMAGLQGAGKTTTAGKLARLL---------KNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFFPSDTNQ----------------KPVEIATAAVD--YAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETLFVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVGEKING--LEPFHPDRLASRILGM >gi|107021668|Burkholderia_cenocepacia|YP_619995.1| signal recognition particle protein [Burkholderia cenocepacia AU 1054] _lim(1-455(1500),455) MLDN-LTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVSLPVVREFIAKVKEKALGEEVISSL---------SPGQALVGVVQKELTAVIG-GD--YEG--KA-AELNLAV-TPPAVILMAGLQGAGKTTTVGKLAKLL---------REKYKKKVLTVSCDVYRPAAIMQLKTVTEQVGADFFPSTPDQ----------------KPVDIALAAVD--WAKRHYHDVLLVDTAGRLGIDEAMMQEIAALHGTLKPAETLFVVDAMLGQDAVNTAKAFNDTLPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDG--LEVFHPDRMANRILGM >gi|83719534|Burkholderia_thailandensis|YP_441696.1| signal recognition particle protein [Burkholderia thailandensis E264] _lim(1-455(1500),455) MLDN-LTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVRDFIAKVKEKALGEDVIGSL---------SPGQALVGVVQKELTAVIG-GD--YEG--KA-AELNLAV-TPPAIILMAGLQGAGKTTTVGKLAKLL---------REKYKKKVLTVSCDVYRPAAIAQLKTVSEQVGADFFPSTPDQ----------------KPVDIANAAVD--WAKRHYHDVLLVDTAGRLGIDEAMMQEIAALHAALKPVETLFVVDAMLGQDAVNTAKAFNDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDG--LEVFHPDRMANRILGM >gi|187925412|Burkholderia_phytofirmans|YP_001897054.1| signal recognition particle protein [Burkholderia phytofirmans PsJN] _lim(1-455(1500),455) MLDN-LTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKALGEEVISSL---------SPGQALVGVVQRELTAIIG-GD--YEG--KA-VELNLAV-TPPAVILMAGLQGAGKTTTVGKLAKLL---------REKYKKKVLTVSCDVYRPAAIAQLKTVTEQVGADFFPSEPDQ----------------KPVDIARAAVD--WAKRHYHDVLLVDTAGRLGIDEAMMQEITALHNTLKPAETLFVVDAMLGQDAVNTAKAFSDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDG--LEVFYPDRMANRILGM >gi|186477391|Burkholderia_phymatum|YP_001858861.1| signal recognition particle protein [Burkholderia phymatum STM815] _lim(1-455(1500),455) MLDN-LTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVRDFISKVKEKALGEEVIGSL---------SPGQALVGVVQRELTAVIG-GD--YEG--KA-AELNLSV-TPPAIILMAGLQGAGKTTTVGKLAKLL---------REKYKKKVLTVSCDVYRPAAIAQLKTVTEQVGADFFPSQPDQ----------------KPVDIARAAVD--WAKRHYHDVLLVDTAGRLGIDEAMMNEIAALHKELNPAETLFVVDAMLGQDAVNTAKAFNDTLPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDG--LEIFYPDRMANRILGM >gi|194290777|Cupriavidus_taiwanensis|YP_002006684.1| signal recognition particle (srp) component with 4.5S RNA (ffs) [Cupriavidus taiwanensis LMG 19424] _lim(1-464(1500),464) MLDN-LTQRLARVVKTMRGEARLTEANTAEMLREVRLAMLEADVALPVVREFVARVKEKAMGEEVVSSL---------TPGQALVGVVQRELTAVIG-GAEAASGNNKE-SELNLAV-QPPAIILMAGLQGAGKTTTAGKLAKWL---------KENKKKKVLTVSCDVYRPAAIAQLKTVSEQVGAEFFPSQPDQ----------------KPVDIARAAVD--WARKHYHDVLIVDTAGRLGIDEAMMQEIAALHAELKPAETLFVVDAMLGQDAVNTAKAFNDTLPLTGVVLTKLDGDARGGAALSVRHITGRPIKFVGVGEKLDG--LEPFYPDRMAQRILGM >gi|73542631|Cupriavidus_pinatubonensis|YP_297151.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ralstonia eutropha JMP134] _lim(1-462(1500),462) MLDN-LTQRLARVVKTMRGEARLTEANTAEMLREVRLAMLEADVALPVVRDFIARVKEKAMGEDVVSSL---------TPGQALVGVVQRELTTVIG-GEEAISG--KG-AELNLAV-QPPAIILMAGLQGAGKTTTVGKLAKWL---------KENKKKKVLTVSCDVYRPAAIAQLKTVSEQVGAEFFPSQPDQ----------------KPVDIARAAVD--WARKHYHDVLIVDTAGRLGIDEAMMQEIAALHAELKPAETLFVVDAMLGQDAVNTAKAFNDTLPLTGVVLTKLDGDARGGAALSVRHVTGRPIKFVGVGEKLDG--LEPFYPDRMAQRILGM >gi|152980389|Janthinobacterium_sp.|YP_001354675.1| signal recognition particle, subunit SRP54 [Janthinobacterium sp. Marseille] _lim(1-455(1500),455) MLDN-LTQRLAKAVKTMRGEARLTETNTAEMLREVRLALLEADVALPAVREFISRVKEKAMGEDVVGSL---------TPGQALVGVVQRELAAIMG-AD--LGP--EA-SQLNFAT-QPPAIILMAGLQGAGKTTTVGKLAKYL---------REQKKKKVLTVSADVYRPAAIGQLETVTAQVGADFFPSQATD----------------KPVDIALAALD--YAKRHYHDVLIIDTAGRLGIDEAMMHEIKALHAAVKPIETLFVVDAMLGQDAINTAKAFSDALPLTGIVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDG--LEAFDPARMADRILGM >gi|33591340|Bordetella_pertussis|NP_878984.1| signal recognition particle protein [Bordetella pertussis Tohama I] _lim(1-469(1500),469) MLDN-LTQRLSRVVKTLRGEARLTEANTQEMLREVRMALLEADVALPVVRDFVARVKEKALGEEVAGSL---------SPGQALVGVVHKELTSLMG-GD--LGE--HA-GELSLAT-QPPAVILMAGLQGAGKTTTTGKLARWLSEGQHVQGGRKTGKKKVLVVSADVYRPAAIEQLKTVAAQVGVDFLPSDVSQ----------------KPEDIARNAID--HARRHHYDVLIVDTAGRLGIDEAMMREIRALHDLVKPIETLFVVDAMQGQDAVNTARAFGDALPLTGVVLTKLDGDARGGAALSVRHVTGKPLKFVGVSEKLDG--LEPFHPERMAQRVLGM >gi|222112106|Acidovorax_ebreus|YP_002554370.1| signal recognition particle protein [Acidovorax ebreus TPSY] _lim(1-459(1500),459) MASA-LTEKLTRLVKEMRGQARITEANVQDMLREVRMALLEADVALPVVRDFIARVKEKALGQEVLGSL---------KPGQALVGIVNKELAATMG-EG--------V-ADINLNA-QPPAVILMAGLQGAGKTTTTAKLAKHL---------IEKRKKKVLTVSGDVYRPAAIEQLKTVTKQAGAEWFPSTPDQ----------------KPSDIALGALD--YAKKHFFDVLLVDTAGRLAIDEVLMQEIKDLHAVLNPVETLFVVDAMQGQDAVNTAKAFKEALPLTGIVLTKLDGDSRGGAALSVRQVTGAPIKFAGVSEKIDG--LEVFDAERHAGRILGM >gi|93006809|Psychrobacter_cryohalolentis|YP_581246.1| signal recognition particle protein [Psychrobacter cryohalolentis K5] _lim(1-515(1500),515) MFDT-LTERLSSSLRNIAGTGQLTEDNIKDTLREVRMALLEADVALPVTRDFVKRVKEQALGAEVLKEL---------APGQAFVKIVHDELTEMMG-SA--------N-QQLEMTG-KPPVIYLLAGLQGAGKTTTAGKLAKFL---------QERHKKKVMLVSADVYRPAAIAQLEQVAGQVNAKFVNSSSDE----------------NPIDIALRAIE--EAKIQYQDILIIDTAGRLAIDETMMDEIKALTAAVNPSETLFVVDAMTGQDAANTAKAFNDALPLTGVILTKTDGDARGGAALSVRAITGKPIKFLGRGEKLDA--LELFHPERIAQRILGM >gi|118497435|Francisella_novicida|YP_898485.1| signal recognition particle GTPase [Francisella tularensis subsp. novicida U112] _lim(1-458(1500),458) MFTS-LSEKLQSSFKKIKGQTSLTEENIQSALRDIRVSLLEADVALPVVKKFIANIKEKAIGEEVKKSL---------TPDQTFISFVKKEIEKALG-EE--------A-VPINLKT-QPPAVILMAGLQGAGKTTSTAKLAKYL---------KEQHKKKVMVVSADVYRPAAIDQLRTLANSLNVEFFESDASQ----------------QPEDIVTAAIK--TAKTKLIDVLIIDTAGRLHIDNDMMDEIKQIHKIAKPIETFFTVDSMTGQDAAVTAKAFNDALELTGVILTKTDGDARGGAALSIREITGKPIKFLGVGEKTDA--LEPFHPDRVASKILGM >gi|25028521|Corynebacterium_efficiens|NP_738575.1| putative signal recognition particle protein [Corynebacterium efficiens YS-314] _lim(1-540(1500),540) MFES-LSDRLNNALKGLRGKGKLTEADINATAREIRLALLEADVSLTVVRSFISRIKERAAGAEVSQAL---------NPAQQVIKIVNEELVQILG-GE--------T-RRLQLAK-TPPTVIMLAGLQGAGKTTLAGKLSKHL---------AAQ-GHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTSIDSYEHEMGTS--HGDPVAVAQAGIE--EAKRTQHDIVIVDTAGRLGIDETLMTQARNIRDAINPDEVLFVIDSMIGQDAVDTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLED--FDVFHPERMASRILGM >gi|19553259|Corynebacterium_glutamicum|NP_601261.1| signal recognition particle GTPase [Corynebacterium glutamicum ATCC 13032] _lim(1-547(1500),547) MFES-LSDRLNSALSGLRGKGKLTEADINATTREIRLALLEADVSLTVVRAFINRIKERAVGAEVSQAL---------NPAQQVIKIVNEELVQILG-GE--------T-RRLSLAK-NPPTVIMLAGLQGAGKTTLAGKLSKHL---------VKQ-GHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTSIDSLEHEMGTS--HGDPVEVARAGIE--EAKRTQHDIVIVDTAGRLGIDETLMTQARNIREAINPDEVLFVIDSMIGQDAVDTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLDD--FDVFHPERMASRILGM >gi|15610053|Mycobacterium_tuberculosis|NP_217432.1| signal recognition particle protein [Mycobacterium tuberculosis H37Rv] _lim(1-525(1500),525) MFES-LSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSAL---------NPAQQVVKIVNEELISILG-GE--------T-RELAFAK-TPPTVVMLAGLQGSGKTTLAGKLAARL---------RGQ-GHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPES-------G--PGDPVAVAAAGLA--EARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLED--FDVFHPDRMASRILGM >gi|183981805|Mycobacterium_marinum|YP_001850096.1| signal recognition particle protein Ffh [Mycobacterium marinum M] _lim(1-529(1500),529) MFES-LSDRLTGALQGLRGKGRLTDADIDATAREIRLALLEADVSLPVVRAFVHRIKERARGAVVSGAL---------NPAQQVVKIVNEELVGILG-GQ--------T-RELVFAK-TPPTVVMLAGLQGSGKTTLAGKLAARL---------RGQ-GHTPLLVACDLQRPAAVNQLQVVGQRAGVPVFAPHPGASPES-------G--PGDPVAVAAAGLA--EAQAKHFDVVIVDTAGRLGIDEELMAQASAIRKAINPDEVLFVLDAMIGQDAVATAQAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLED--FDVFHPDRMASRILGM >gi|145593852|Salinispora_tropica|YP_001158149.1| signal recognition particle protein [Salinispora tropica CNB-440] _lim(1-514(1500),514) MFDT-LSDRLSGIFTKLRGKGRLTDADIDATAREIRLALLEADVALPVVKGFIARVKERARGAEVSQAL---------NPAQQIVKIVNEELVNVLG-GE--------A-RRLQLAK-QPPTVIMLAGLQGSGKTTLAGKLASWL---------RGQ-GHQPLLVAADLQRPNAVGQLQVLGGRAGVEVYSPEPGN-----------G--VGDPVQVARASIE--HARRAARDIVIVDTAGRLGIDAEMMQQAADIRDAVNPDEVIFVIDAMVGQDAVRTAEAFRDGVGITGVVLSKLDGDARGGAALSVREVTGQPILFASTGEKLED--FDVFHPDRMASRILGM >gi|111225152|Frankia_alni|YP_715946.1| Signal recognition particle GTPase [Frankia alni ACN14a] _lim(1-517(1500),517) MFDT-LSSRLDKVFTSLRGRGRLTDADIDATAREIRVALLEADVALPVVRSFVAAIKSRARGAEVGASL---------NPAQQVIKIVNEELVAILG-GG--------T-TTLRFAK-TPPTVILLAGLQGTGKTTLAGKLGRWL---------KAQ-GHTPLLVAADLQRPNAVNQLQVVGARAGVEVFAPEPGN-----------G--VGDPVRVARDALA--HARRQVFDVVVVDTAGRLGVDEELMRQAADIRDAVSPDEILFVLDAMIGQDAVATANAFADGVGFSGVVLTKLDGDARGGAALSVAQVTGRPIMFASTGEALDD--FDVFHPERMASRILGM >gi|86742276|Frankia_sp.|YP_482676.1| signal recognition particle subunit FFH/SRP54 (srp54) [Frankia sp. CcI3] _lim(1-517(1500),517) MFDT-LSSRLDKVFASLRGRGRLTDADIDATAREIRVALLEADVALPVVRGFVAAVKERARGAEVSASL---------NPAQQVIKIVNEELVAILG-GG--------T-TTLRYAK-TPPTVILLAGLQGTGKTTLAGKLGRWL---------KAQ-GHTPLLVAADLQRPNAVNQLQVVGARAGVEVFAPEPGN-----------G--VGDPVRVARDALA--HAHRQVFDVVVVDTAGRLGVDEEMMRQAADIRDAVSPDEILFVLDAMIGQDAVATASAFADGVGFSGVVLTKLDGDARGGAALSVAQVTGRPIMFASTGEALDD--FDVFHPERMASRILGM >gi|158312999|Frankia_sp.|YP_001505507.1| signal recognition particle protein [Frankia sp. EAN1pec] _lim(1-521(1500),521) MFDT-LSSRLDKVFTSLRGRGRLTDADIDATAREIRVALLEADVALPVVRGFVAAIRERARGAEVSTSL---------NPAQQVIKIVNEELVAILG-GG--------T-TTLRFAK-TPPTVILLAGLQGTGKTTLAGKLGRWL---------RAQ-GHTPLLVAADLQRPNAVNQLQVVGQRAGVEVFAPEPGN-----------G--VGDPVRVARDALA--HARRHVFDVVVVDTAGRLGVDEELMRQAADIRDAVSPDEILFVLDAMIGQDAVSTAQAFADGVGFTGVVLTKLDGDARGGAALSVARVTGAPIMFASTGETLDD--FDVFHPERMASRILGM >gi|29829190|Streptomyces_avermitilis|NP_823824.1| signal recognition particle [Streptomyces avermitilis MA-4680] _lim(1-516(1500),516) MFDT-LSDRLSATFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVRTFIKNVKERALGSEVSKAL---------NPAQQVLKIVNEELVTILG-GE--------T-RRLRFAK-NPPTVIMLAGLQGAGKTTLAGKLGKHL---------KDQ-GHSPILVAADLQRPNAVNQLSVVAERAGVAVYAPEPGN-----------G--VGDPVKVAKDSIE--FAKTKVHDIVIVDTAGRLGIDQELMQQAADIRDAVSPDEILFVVDAMIGQDAVNTAEAFRDGVGFDGVVLSKLDGDARGGAALSIASVTGKPIMFASNGEKLDD--FDAFHPDRMASRILDM >gi|21223941|Streptomyces_coelicolor|NP_629720.1| signal recognition particle protein [Streptomyces coelicolor A3(2)] _lim(1-550(1500),550) VFDT-LSDRLSATFKSLRGKGRLTEADIDATAREIRIALLEADVALPVVRAFIKKVKERSLGAEVSKAL---------NPAQQVLKIVNEELVGILG-GE--------T-RRLRFAK-QPPTVIMLAGLQGAGKTTLAGKLGHWL---------KEQ-GHSPLLVACDLQRPNAVNQLSVVAERAGVAVYAPEPGN-----------G--VGDPVKVAKDSIE--FAKAKVHDLVIVDTAGRLGIDQELMQQAADIRDAVSPDEILFVVDAMIGQDAVNTAEAFRDGVGFDGVVLSKLDGDARGGAALSIASVTGKPIMFASNGEKLDD--FDAFHPDRMASRILDM >gi|119025229|Bifidobacterium_adolescentis|YP_909074.1| signal recognition particle protein [Bifidobacterium adolescentis ATCC 15703] _lim(1-549(1500),549) AFSS-LTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTSRIRERALGTEVSEAL---------NPAQQVVKIVNEELTAVLGAGV--------D-RPLNFAK-NPPTIIMLAGLQGAGKTTLAGKLGYWL---------KDS-GHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGEAVVSPGQTTGDPVKVARDAVE--LAKQKLYDTVIIDTAGRLGVDEELMKQARDIRDAVQPNEILFVIDAMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKD--FEVFHPDRMASRILDM >gi|23464904|Bifidobacterium_longum|NP_695507.1| signal recognition particle protein [Bifidobacterium longum NCC2705] _lim(1-582(1500),582) AFSS-LTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTGKVRERALGTEVSDAL---------NPAQQVVKIVNEELTDVLGQGV--------D-RPLNFAK-NPPTIIMLAGLQGAGKTTLAGKLGYWL---------KDS-GHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGEAVAAPGQTSGDPVKVARDSIE--LAKQKLYDTVIIDTAGRLGVDEELMKQARDIRDAVRPNEILFVIDAMIGQDAVKTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASNGEGLKD--FEVFHPDRMASRILDM >gi|148240067|Synechococcus_sp.|YP_001225454.1| Signal recognition particle protein [Synechococcus sp. WH 7803] _lim(1-523(1500),523) MFDE-LSARFEDAVKGLRGQDKISDTNVEGALKDVRRALLEADVSLPVVKAFVADVREKAVGSDVVRGV---------SPDQKFIQVVHEQLVEVMG-GG--------N-APLAQAE-TAPTVVLMAGLQGAGKTTATAKLGLHL---------KDQ-GRRALMVGADVYRPAAIEQLKTLGGQIGVEVFSLGADA----------------KPEAIAAAGLA--KAKEEGFDTLLVDTAGRLQIDSEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHEQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEA--LQPFHPERMASRILGM >gi|33866152|Synechococcus_sp.|NP_897711.1| signal recognition particle protein (SRP54) [Synechococcus sp. WH 8102] _lim(1-487(1500),487) MFDE-LSARFEDAVKGLKGQDKISDTNVEVALKDVRRALLEADVSLPVVKDFVADVREKAVGAEVVRGV---------SPDQKFIQVVHEQLVEVMG-GD--------N-APLAKAA-EAPTVVLMAGLQGAGKTTATAKLGLHL---------KDQ-GRRALMVGADVYRPAAIEQLKTLGGQIGVEVFSLGTEA----------------KPEEIAAAGLA--KAKEEGFDTLLVDTAGRLQIDTEMMEEMVRIRTAVQPDEVLLVVDSMIGQEAAELTRAFHDQVGITGAVLTKLDGDSRGGAALSIRKVSGQPIKFIGTGEKVEA--LQPFHPERMASRILGM >gi|17229444|Nostoc_sp.|NP_485992.1| signal recognition particle protein [Nostoc sp. PCC 7120] _lim(1-490(1500),490) MFDA-LADRLESAWKKLRGQDKISESNIQDALREVRRALLEADVNLQVVKDFISEVEAKAQGAEVISGV---------RPDQQFIKIVYDELVQVMG-EE--------N-VPLAEVE-QKPTIVLMAGLQGTGKTTATAKLALHL---------RKL-ERSCLLVATDVYRPAAIDQLLTLGKQIDVPVFELGSDA----------------DPVEIARQGVE--RAKAEGVNTVIIDTAGRLQIDEDMMAELARIKETVQPHETLLVVDSMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQISGAPIKFVGVGEKVEA--LQPFYPDRMASRILGM >gi|75676963|Nitrobacter_winogradskyi|YP_319384.1| Signal recognition particle protein [Nitrobacter winogradskyi Nb-255] _lim(1-516(1500),516) MFDN-LSERLGGILDRLTRRGALTEADVDAAMREVRRALLEADVSLDVVRSFTDKVREQAIGATVVKSV---------TPGQMVVKIVHDELIATLG-SD--------G-QTIELNA-VPPVIIMMVGLQGSGKTTTTAKLARRL---------TERDKRKVLMASLDIYRPAAMEQLAVLGRDLDIKTLPIVAGQ----------------KPEQIARRALE--AGKLGGYDVVLLDTAGRTTLDEDMMSEAASIKTAAHPHEVLLVADSLTGQDAVNLARSFDERVGLTGIVLTRVDGDGRGGAALSMRQVTGKPIKLIGTGEKTDA--LEDFHPSRIAGRILGM >gi|92119038|Nitrobacter_hamburgensis|YP_578767.1| signal recognition particle protein [Nitrobacter hamburgensis X14] _lim(1-511(1500),511) MFDN-LSERLGGILDRLTRRGALTEADVDAAMREVRRALLEADVSLDVVRSFTDKVREQAIGATVVKSV---------TPGQMVVKIVHDELIATLG-AD--------G-QTIDLNG-VPPITIMMVGLQGSGKTTTTAKLARRL---------TERDKRKVLMASLDIYRPAAMEQLAVLGRDLDIQTLPILAGQ----------------KPEQIARRALE--AGKLGGYDVVLLDTAGRTTLDNEMMSEAANIKAAARPHEVLLVADSLTGQDAVNLARSFDERVGLTGIVLTRVDGDGRGGAALSMRQVTGKPIKLIGTGEKTDA--LEDFHPSRIAGRILGM >gi|148251976|Bradyrhizobium_sp.|YP_001236561.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bradyrhizobium sp. BTAi1] _lim(1-515(1500),515) MFDN-LSERLGGILDRLTGRGSLSEADVDAAMREVRRALLEADVALEVVRSFTERVREQAIGATVVKSV---------TPGQMVVKIVHDELVKTLG-DD--------G-QTIDLNA-VPPVPIMMVGLQGSGKTTTTAKLARRM---------VQRDKRKVLMASLDVYRPAAMEQLAVLGRDLDIPTLPIVAGQ----------------MPPQIARRAIE--AAKLGGYDVVLLDTAGRTTLDEDMMKEAAEIKAVANPHEVLLVADSLTGQDAVNLARAFDQRVGLTGIALTRIDGDGRGGAALSMRAVTGKPIKLLGTGEKTDA--LEDFYPSRIAGRILGM >gi|188579898|Methylobacterium_populi|YP_001923343.1| signal recognition particle protein [Methylobacterium populi BJ001] _lim(1-520(1500),520) MFEG-LSDRLSGILSGLTRRGALTEADVTAAMREVRRALLEADVALEVVRSFTDKVREKAVGAVVLKSV---------TPGQMVVKIVNDELIAMLG-TD--------A-SVVDLNA-PAPVAILMVGLQGSGKTTTTAKIARRL---------NQREKRRVLLASLDTRRPAAMEQLAVLAKQVEVESLPIVAGQ----------------SAVQIARRAME--AARLGGFDVVMLDTAGRTTVDEGLMAEAAEVKAATNPHEVLLVADALTGQDAVNTARAFDQRLGVTGIVLTRMDGDSRGGAALSMRAVTGKPIKLVGVGEKVDA--LEEFHPQRVANRILGM >gi|222087524|Agrobacterium_tumefaciens|YP_002546061.1| signal recognition particle GTP-binding protein [Agrobacterium radiobacter K84] _lim(1-521(1500),521) MFEN-LQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAVGAEILKSI---------KPGQMVVKIVHDELIEMLG-GE--------G-VGIDLNA-PAPVVVMMVGLQGSGKTTTSAKIAHRL---------TSRDRKKVLMASLDTRRPAAQEQLRQLGVQAGIDTLPVIAGQ----------------SPTDIAARAVQ--AAKLGGHDVVILDTAGRTHIDEPLMVEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDDRVGITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMGE--LEEFHPRRIADRILGM >gi|241206757|Rhizobium_leguminosarum|YP_002977853.1| signal recognition particle protein [Rhizobium leguminosarum bv. trifolii WSM1325] _lim(1-525(1500),525) MFEN-LQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAVGAEILKSI---------KPGQMVVKIVHDELIEMLG-GE--------G-VGVDLHA-AAPVVIMMVGLQGSGKTTTSAKIAHRL---------TTREKKKVLMASLDTRRPAAQEQLRQLGAQANIDTLPVISGQ----------------SPTDIAARAVQ--AAKLGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARSFDERVGITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMSE--LEEFHPRRIADRILGM >gi|15966993|Sinorhizobium_meliloti|NP_387346.1| signal recognition particle protein [Sinorhizobium meliloti 1021] _lim(1-513(1500),513) MFES-LQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTEKVREKAVGAEIVKSI---------KPGQMVVKIVHDELIAMLG-SE--------G-VTIDLNA-AAPVVIMMVGLQGSGKTTTTGKIAKRL---------TARDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPVIAGQ----------------SPTDIAARAVQ--AAKLGGHDIVILDTAGRTHIDEPLMIEMAEIKRKSNPHEILLVADALTGQDAVNLARNFDERVGITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMDE--LEEFHPRRVADRILGM >gi|148560502|Brucella_ovis|YP_001259663.1| signal recognition particle protein [Brucella ovis ATCC 25840] _lim(1-523(1500),523) MFET-LQERLGSILNGLTGRGALSESDVTAALREVRRALIEADVSLEVVRSFTDRVREKAVGAEILKSI---------KPGQMVVKIVHDELVEMLG-TE--------G-VAIDLNA-PAPVVIMMVGLQGSGKTTTTGKIAKRL---------TERQRKRVLMASLDTRRPAAQEQLRQLGLQTGVDTLPIIAGQ----------------SPVEIARRAVQ--AAKLGAHDVVILDTAGRTHIDEPLMVEMADIRKAANPHEILLVADSLTGQDAVNLARNFDERVGITGIVLTRMDGDGRGGAALSMRAITGKPIKLIATGEKMDA--LEEFYPKRIADRILGM >gi|225630810|Wolbachia_sp.|YP_002727601.1| Signal recognition particle GTPase [Wolbachia sp. wRi] _lim(1-447(1500),447) MFKS-LTESLNSVFSKLRGKSIISEDDFNLAMREIRIALIEADVSLEVAKKFINDIKDKVIGEKVIKSV---------SPAQMIIKIVQDNLVAVLG-SE--------K-SDLNLAV-KPPAVIMMVGLQGAGKTTTSGKLALKL---------KKQ-KKKVMLASLDIYRPAAQKQLEVLGKQIDVQTLPVVIDE----------------KPITITKRALA--AAKNDNYDVLILDTAGRLHIDNNMMNELKAVKEIASPAEVILVADAMIGQDAVNIAKSFNEVIGVTGIILTRVDGDARGGAALSMKMIADCPIKFIACGEKLSD--LDDFYPDRIAKRILSM >gi|190571419|Wolbachia_endosymbiont|YP_001975777.1| signal recognition particle protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] _lim(1-447(1500),447) MFKS-LTESLNSVFSKLRGKSIISEDDFNLAMREIRIALIEADVSLEVAKKFINDIKDKVIGEKVIKSV---------SPSQMIIKIVQDNLVAVLG-SE--------K-SDLNLAA-KPPAVIMMVGLQGAGKTTTSGKLALKL---------KKQ-KKKVMLASLDIYRPAAQKQLEVLGKQIDVQTLPVVIDE----------------KPVTITKRALA--AAKNENYDVLILDTAGRLHIDNNMMNELKAVKEIASPAEVILVADAMIGQDSVNIAKSFNEIIGVTGIILTRVDGDARGGAALSMKMITDCPIKFIACGEKLSD--LDDFYPDRIAKRILSM >gi|157803379|Rickettsia_canadensis|YP_001491928.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel] _lim(1-449(1500),449) MFKT-LTQNLTKAFDQLVGSGILTEAQIDATMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSV---------SPGQMIIKIIHEEMINLLAASE--------SETKLNLNS-KPPVNFLMVGLQGSGKTTASGKLALRL---------KNH-NKKVLLVSLDTYRPAAQEQLAILANLVQINSLPIVQGE----------------KPLDIVKRAIA--EAKLSAYDVVIYDTAGRTQIDKEMMEEALSIKKIVEPTETLLVIDSMTGQDAVVTASSFNEKLEISGLILSRIDGDSKGGAALSVKYITKKPIKFLSNGEKLTD--LEEFDAKRLASRILDM >gi|67459498|Rickettsia_felis|YP_247122.1| Signal recognition particle protein [Rickettsia felis URRWXCal2] _lim(1-487(1500),487) MFKT-LTQNLTKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSV---------SPGQMIIKIIHEEMINLLASSE--------SETKLNLNS-KPPVNFLMVGLQGSGKTTASSKLALRL---------KNQ-NKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGE----------------KPLDIVKRAIA--EAKISAYGVVIYDTAGRTQIDKEMMEEALAIKKIVEPTETLLVIDSMTGQDAVVTANSFNEKLEISGLILSRIDGDSKGGAALSVKYITKKPIKFLSSGEKLTD--LEEFDAERLASRILDM >gi|229586415|Rickettsia_africae|YP_002844916.1| Signal recognition particle protein [Rickettsia africae ESF-5] _lim(1-449(1500),449) MFKT-LTQNLTKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSV---------SPGQMIIKIIHEEMINLLASSK--------SETKLNLNS-KPPVNFLMVGLQGSGKTTASSKLALRL---------RNQ-NKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGE----------------KPLDIVKRAIA--EAKISAYDVVIYDTAGRTQIDKAMMEEALAIKKIVEPTETLLVIDSMTGQDAVVTASSFNEKLAISGLILSRIDGDSKGGAALSVKYITKKPIKFLSSGENLID--LEEFDAERLASRILDM >gi|203288125|Borrelia_recurrentis|YP_002223140.1| signal recognition particle protein [Borrelia recurrentis A1] _lim(1-449(1500),449) MFEN-LSAGFKDFIKYVSGKAVINEKNIETAIDTIKNTLIEADVNLRVVRRFVNSVVEEAKGIKVLRGV---------DPKSHFIKIVNDKLVNFLG-DK--------H-SELILNPINKLSCILMLGLQGSGKTTTCAKLAMRL---------KSE-NRKVLLVAADTFRAAAIEQLKVLGAQINISVFALENED----------------SPIKVVKKSIE--YARVELFDTVIIDTRGRLEVEDLLLREIIDIKNIVVPTETILVADAMTGQVAVNIAKKFNESVGITGVIFTKFDSDARGGAILSLKTICGVPIKFVGVGEKPED--LDVFYPDRVSSRILGM >gi|86159726|Anaeromyxobacter_dehalogenans|YP_466511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Anaeromyxobacter dehalogenans 2CP-C] _lim(1-550(1500),550) MLET-VSKGFKAARNKLKGRTEITPEVVDDALRDIRVSLLEADVSFDVVKRFVARVREKAIGEVVETKIKTEKGQLRVTPQDHFVKICHDELEALMGPVD----------TSLRQGERGRPTGIMMVGLQGSGKTTTAGKIANRL---------LKD-GKQVMLVAADVYRPAAVDQLKVLGERLGVPVFH-EPGV----------------SPPDMCRHAFE--AAQREHRNAVIYDTAGRLAIDDELMTELENIKANVAPENILLVADAMIGQDAVKTASEFDRRLAIDGFILTKLDGDARGGAALSIKEVTGKPIKFLGMGEALDR--LEEFRPEGLASRILGF >gi|42560958|Mycoplasma_mycoides|NP_975409.1| Signal recognition particle M54 protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] _lim(1-447(1500),447) GFGDFLSKRMQKSIEKNMKNSTLNEENIKETLKEIRLSLLEADVNIEATKEIINNVKQKALGGYIFEGA---------NAHQQMIKIVHEELVNILG-KE--------N-APLELNK-K-PSVVMMVGLQGSGKTTTANKLAYLL---------NKKNKKKVLLVGLDIYRPGAIEQLIQLGQKTNIQVFEKGKQ-----------------DPILTAQEALE--YAQENNFDVVILDTAGRLQVDQVLMTELDNLKKKTSPSEILLVVDGMSGQEIINVTNEFNSKLKLSGVVVTKLDGDARGGATLSISYLTKLPIKFIGEGEGYNA--LAAFYPKRMADRLMGM >gi|13357648|Ureaplasma_parvum|NP_077922.1| signal recognition particle [Ureaplasma parvum serovar 3 str. ATCC 700970] _lim(1-448(1500),448) MFKAMIGSIVSKQMSKKLKNATIVEEDIKELLSEIRIALLDADVNLLVVKKFIKNIKEKTIGLYVEANQ---------KPADLVLKIIKDELVEILG-KE--------N-KPVNTA--KSQLKIMMVGLQGSGKTTTTGKLANYF---------KNKYNKKPLLVAADIYRPAAIDQLRTLAKQVRVDFWEEGTQ-----------------RPDLIVKNALN--KADENENNLIIVDTAGRLQTNEELMQELVNVKKTLNPDEVFLVVDAMAGQDIINVATEFNNWLKLTGIIVTKLDSDARAGAVLSLTSLLNIPIKFTGTGEKIGS--IDSFYPERMADRILGL >gi|88608106|Neorickettsia_sennetsu|YP_506423.1| signal recognition particle protein [Neorickettsia sennetsu str. Miyayama] _lim(1-449(1500),449) MFDS-LSKKIGGALDGIKNRGVITEKEFDDFVRKLRLTFLEADVSLPVTKQFIANVRESVIGKSRVKGI---------STPAVIGSVVKEELVKILG-GE--------S-QKFEFPK-FGKQILMFVGLQGVGKTTTAAKLALLI---------RKKFKKNILLSSVDIYRPAARKQLEILAKQIDVDTVPIVEGE----------------DVDAIVKKTLDLFNNSHEGYDVLMVDTAGRSQIDSVLMEELKVIKNRLQPSEIFQVLDAMMGQDSLNVARTFHSEIGTTGVIVSRLDSDARVGSVLSVRQSVGLPIRFCGAGERVND--LEEFHPERMAGRIMGA >gi|108563516|Helicobacter_pylori|YP_627832.1| signal recognition particle protein [Helicobacter pylori HPAG1] _lim(1-448(1500),448) MFQA-LSDGFKNALNKIRFQD--DEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKASGIGK--------------QQFLDALEKSLLEILSAKG--------S-SGFTFAQ-TPPTVVLMAGLQGSGKTTTTAKLAHYL---------KTK-NKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENK-----------------SVKEIANNALK--RAKEAQFDVLLVDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPD--LDVFVPERIVGRLMGA