>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/2hqs/complex.1 A 397|PDB|input
DS-GVDSGRPIGVVPF--QWAG--------PGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQ-PG----SA-QEVQPAAWSALGIDAVVVGQVT-PNPDGSYNVAYQLVDTG---GAPGT---------------------VL-----AQNSYKVNKQW-LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQ---FPYELRVSDY----DGYNQFVVH-RSPQPLS-PAWSPDGSKLAY-VTFESG-------RSALVIQTLANGAV-RQVA-SFPRHNGAPA-----------FSPDGSKLAFA-LSKTGSLNLY-VDLASG-QIRQVTDG-RSNNTEPTWFPDSQNLAFTSDQAGR--PQVYKVNING-------G---A-PQRITWE----GSQNQDADVSSDGKFVVSSN----GG--Q-----QHIAKQDL----ATGG-VQVLS-STFLDETPSLAPNGT-VIYSSS-------------------QGG--------SVLNLVSTDGRFKARLPATDGQVKFPAWSPYL
>gi|110804634|Shigella_flexneri|YP_688154.1| translocation protein TolB [Shigella flexneri 5 str. 8401]  _lim(1-430(1500),430)
DS-GVDSGRPIGVVPF--QWAG--------PGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQ-PG----SA-QEVQPAAWSALGIDAVVVGQVT-PNPDGSYNVAYQLVDTG---GAPGT---------------------VL-----AQNSYKVNKQW-LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQ---FPYELRVSDY----DGYNQFVVH-RSPQPLMSPAWSPDGSKLAY-VTFESG-------RSALVIQTLANGAV-RQVA-SFPRHNGAPA-----------FSPDGSKLAFA-LSKTGSLNLYVMDLASG-QIRQVTDG-RSNNTEPTWFPDSQNLAFTSDLAGR--PQVYKVNING-------G---A-PQRITWE----GSQNQDADVSSDGKFMVMVS--SNGG--Q-----QHIAKQDL----ATGG-VQVLS-STFLDETPSLAPNGTMVIYSSS-------------------QGMG-------SVLNLVSTDGRFKARLPATDGQVKFPAWSPY-
>gi|238920738|Edwardsiella_ictaluri|YP_002934253.1| translocation protein TolB [Edwardsiella ictaluri 93-146]  _lim(1-430(1500),430)
TQ-GVDSARPIGVVPF--KWMG--------PGTAPENIGGIIAADLRNSGKFNPIDASRMPQQ-PS----AA-AEVSPAAWTALGIDAVVVGQVQ-PGADGSYLVSYQLVDTS---GNPGS---------------------VL-----VQNQYKVTGQW-LRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQ---FPYELRVADY----DGYNQFVVH-RSAEPLMSPAWSPDGSKLAY-VTFESG-------RSALVIQTLSNGAI-RQVA-SFPRHNGSPA-----------FSPDGSKLAFA-LSKTGSLNLYVMDLASG-AIRQVTDG-RSNNTEPTWFPDSQNLAFTSDQAGR--PQIYKMNING-------G---V-AQRLTWE----GSQNQDAEVSPDGKFLVMVS--SSAG--A-----QHIAKLDL----GTNA-TQVLT-DTFLDETPSIAPNGTMVIYSST-------------------QGLG-------SVLQLVSIDGRFKARLPATDGQVKFPAWSPY-
>gi|253990433|Photorhabdus_asymbiotica|YP_003041789.1| translocation protein TolB [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]  _lim(1-451(1500),451)
TQ-GVDSARPIGIVPF--KWTG--------ASNAPEEIGTIVGADLRNSGKFNPIDASRMPQQ-PT----TA-SEVTPAAWSALGIDAVVVGQIQ-PSADGSFLISYQLVDTA---GAPGT---------------------VL-----AQNQFKVTKQW-LRYAAHTASDEVFEKLTGIKGAFRTRLAYIVKTNGGK---YPYELRVSDY----DGYNQFTVH-RSPEPLMSPAWSPDGAKLAY-VTFESG-------RSALVIQTLASGEV-RQVA-SFPRHNGAPA-----------FSPDGSKLAFA-LSKSGSLNLYVMDLSSA-QIRQVTDG-RSNNTEPSWMPDNQTLVYTSDQGGR--PQLYKINING-------G---A-PQRLTWE----GTQNQDADVSADGNFVVMVS--SESG--K-----QHIAKQDL----ATGA-VQTLT-DTFLDETPSIAPNGTMVIYSST-------------------QGLG-------TVLQLVSTDGRFKARLPATDGQVKFPAWSPY-
>gi|197284481|Proteus_mirabilis|YP_002150353.1| translocation protein TolB [Proteus mirabilis HI4320]  _lim(1-432(1500),432)
TQ-GVNTARPIGVVPF--KWEG--------TGQMPEDIAGVIAADLRNSGKFNPIDMNRLPQQ-PV----TA-SEVQPALWTALGIDSVVVGRVQ-PSADGQYVVSYQLVDVA---GSPGA---------------------VL-----AQSEYKISNKW-LRYAAHTASDEIFEKLTGIRGAFRTRIAYVVVTNGGA---YPYELRVSDY----DGFNQDRVY-RSSQPLMSPAWSPDGAKLAY-VTFESG-------QSALVVQTLATGEV-RQIA-SFPRHNGAPA-----------FSPDGSKLAFA-LSKSGSLNLYVMDLASG-NMTQVTNG-RSNNTEPTWMPDGQTLVYTSDQGGR--PQIYKINING-------G---T-PERITWE----GKQNQNPAVSPDGSFLVMVS--SESG--R-----QHIAKQDL----ETNA-VQYLT-DTFLDETPSIAPNGTMVIYSST-------------------QGLG-------TILRLVSTDGRFKARLPATDGQVKSPAWSPF-
>gi|165975760|Actinobacillus_pleuropneumoniae|YP_001651353.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]  _lim(1-426(1500),426)
DE-GVSMAQPIAVVPF------------KANGGVPADVGQIIADDLRNSGKFTPVERSKLPAQ-PG----SA-AEVNSQQWTDIGVDSVVVGQVT-PTGGG-YNVAYQLVDTL-----SNPAT-------------------VL-----AQGAFNVPAAQ-IRQGAHTVSDQVFEKITQIRGAFRTKIAYVV-----QRGVSSYELRVSDY----DGYNAFTVV-KSKEPLMSPEWSPDGSRLAY-VTFENK-------KAQVVVHDLRSGSR-RVVA-ALRGHNGAPA-----------FSPDGSRIAFA-SNQDGELDIYVVGANGG-KPSKLTAN-AGNNTEPSWSPDGSTIYFTSDRAGS--PQVYRMGLSGG------G-----ASPMGGS----GSYNAK--VSSDGKNLIMIA--GD-----------KVVKRDL----ASGG-TEVLS-STFLDESPSISPNGIMVIYSST-------------------KGTS-------KVLQLVSADGRFKANLPGAGGQFKFPAWSPYL
>gi|152979449|Actinobacillus_succinogenes|YP_001345078.1| translocation protein TolB [Actinobacillus succinogenes 130Z]  _lim(1-427(1500),427)
DE-GVEGARPIAVVPF------------KSNGSVPADIAEIITADLRNSGKFNPIPVNQMPQQ-PG----SA-SEVTPDAWASLGIDAVVVGQVT-ASGNG-YQIAYQLVDTVGASGNAGA---------------------VL-----AQNSLTVQPKW-IRWGAHQVSDEVFEKMTGIKGAFRTRIAYVVQ----RNA-GSHELRIADY----DGFNQFVVT-RSSQPIMSPAWSPDGQRLAY-VSFENR-------KSQLVVHNLGSGQR-KVVA-AFRGHNGAPA-----------FSPDGSRLAFA-NNQDGLLNIYVMNSNGG-HPTKLTGG-AGNNTEPSWTQDGR-ILFTSDRSGS--PQVYSMSSSGG------G-----ATLIGGG----RSYSGQ--MSSDGKTLVMIS--GD-----------NVVKYDT----TTGT-SEVLS-STFLDESPSISPNGIMIIYSST-------------------QGLG-------KVLQLVSADGRFKARLPGSDGQVKFPAWSPYL
>gi|54309711|Photobacterium_profundum|YP_130731.1| translocation protein TolB [Photobacterium profundum SS9]  _lim(1-449(1500),449)
TE-GIDSARPIGIIPF--TWEG--------EGKLPTDISSVIASDLQRSGKFSPIATSKMPQT-PD----SE-EQIDYRAWTAMGVDALVTGKVT-KNAEGNYVVNYQLVDVV-----RGQLTSGESRGL-ANGELVLTKDHLL-----VNNRAIVKETR-LRQYAHRISDVVYEALTGEQGAFLTRIAYVVIDDKSK---HPYQLRVADY----DGFNERLVL-KSRQPLMSPAWSPDGSKLAY-VSFENQ-------QAQIYIMDIYKGTR-ELVT-SYPRHNGSPR-----------FSPDGKKLALV-LSKTGSLQIYIKDLKTK-KLTQITSG-RANNTEAFWDPDGKSLIFTSDRGGQ--PQIYRVNLAD-------N---S-TKRLTWQ----GSQNLGGQLTPDGRYLVMVN--RSDT--G-----FNIAKQDL----KTGA-VQILT-KTFLDESPSIAPNGGMVIYSSV-------------------NNKS-------NELSLVSIDGRFKARLPTTNGRVRAPSWGPF-
>gi|197336086|Aliivibrio_fischeri|YP_002155723.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio fischeri MJ11]  _lim(1-450(1500),450)
TE-GIDSARPIGIVPF--KWHG--------EGKLPQDISAIISSDLQRSGKFSPIPTNKMPQT-PY----KD-SDINYEAWTKMGVDAIVTGEVK-LNAQGKYEVTYKLIDVV-----RGQLTKGQSKALDESGKLVLTRDHIL-----VNKVASLSTKQ-LRKYAHRISDVVYEKLTGERGAFLTRIAYVVVNDKAQ---YPYQLRIADY----DGYNERLVL-KSKQPIMSPAWSPDGKKLAY-VSFENR-------KSQIFIMNIYTGKR-ELIA-SYPRHNGAPR-----------FSHDGDKLAIV-LSKSGSLQIYVVDLKTK-KMSQITRG-RANNTEPFWAPDNKSLIFTSDRGGK--PQIYRVNLGD-------G---S-TKRLTWQ----GSQNLGGQITPDGKYIVMVN--RSET--G-----FNLAKQDL----ETGA-VQVLT-KTLLDESPSIAPNGGMVIYSSI-------------------YRKQ-------NVLSMVSIDGRFKARLPATNGRVRAPAWSPF-
>gi|15641838|Vibrio_cholerae|NP_231470.1| translocation protein TolB [Vibrio cholerae O1 biovar El Tor str. N16961]  _lim(1-450(1500),450)
TD-GIDSARPIAIVPF--KWEG--------ATKLPEDVSAVIASDLQRSGKFSPVPTSKMPQT-PY----SE-EQVNFGKWTSMGVDSLLTGTIT-QNAEGSYVISYQLVDIV-----RGQLTQGQSKALSQDGQLVLSKDHVL-----FNKVATVPASR-MREYAHRIADLVYEELTGERGAFLTRIAYVVVND--KDP-YPYQLRIADY----DGYNERLVL-RSKQPLMSPAWSPDGQTLAY-VSFQNG-------QAEIYMMNIYSGKR-EKLT-SFPRHNGAPR-----------FSPDGKTLALV-LSKTGNLQVYTMDLATR-RLTEVTSG-RSNNTEPFWHPDGKSLIFTSDRGGK--PQIYQVNLSG-------G---E-TKRLTWQ----GSQNLGGQITPDGKFLVMVN--RSDS--G-----FNLAKQDL----ETGA-MQILT-KTLLDESPSIAPNGGMVIYSSI-------------------YNKA-------NVLSMVSIDGRFKARLPATNGRVRAPAWSPF-
>gi|156973900|Vibrio_harveyi|YP_001444807.1| translocation protein TolB [Vibrio harveyi ATCC BAA-1116]  _lim(1-442(1500),442)
TD-GIDSARPVAVVPF--KWEG--------SEPLPTDISAVIASDLQRSGKFSPVPTSKMPQT-PF----NE-SEVNFDAWTGLGVDALLTGSIK-KNEQGNYVVNYQLVDVV-----RGQLTGGKSKALGGDGELVLSKDHVL-----FNKVATVEGPR-MREYAHRISDLVYEQLTGERGAFMTRIAYVVVND--KDN-FPYQLRVADY----DGYNERLVL-RSKQPLMSPAWSPDGQKLAY-VSFQNG-------QAEIFIMNIYTGER-EKIT-SYPRHNGAPR-----------FSPDGSQLALV-LSKTGSLQVYTLDLKTR-KLTQITRG-RSNNTEPFWHPDGKSLIFTSDRGGK--PQIYQVDLGS-------G---S-TNRLTWQ----GSQNLGGQITPDGRFLVMVN--RSDS--G-----FNLAKQDL----ETGA-LQVLT-KTLLDESPSIAPNGGMVIYSSI-------------------YNKK-------NVLSMVSIDGRFKARLPATNGRVRAPAWSPF-
>gi|32699701|Vibrio_vulnificus|Q8DAM3.1|TOLB_VIBVU RecName: Full=Protein tolB; Flags: Precursor _lim(1-443(1500),443)
TD-GIDSARPIAIVPF--KWQG--------TKALPVDISSVVASDLQRSGKFSPVPTSKMPQT-PY----NE-SEINFDAWTNLGVDTLLTGSVT-QNEKGEYVINYQLVDVV-----RGQLTSGQSRAL-EDGQLVLSKDHVL-----FNKVATITAPR-MREYAHRISDLIYEQLTGERGAFLTRIAYVVVND--KDK-FPYQLRVADY----DGFNERLVL-RSKQPLMSPAWSPDGRRLAY-VSFQNG-------QAEIFVLNIYTGEH-EKLT-SFPRHNGAPR-----------FSPDGKKLAIV-LSKTGSLQIYTLDLQTR-QLTQITRD-RSNNTEPFWHPDGKSLIFTSDRGGK--PQIYRVNLSD-------G---S-TSRLTWQ----GSQNLGGQITPDGRFLIMVN--RSDS--G-----FNLAKQDL----ETGA-VQVLT-KTLLDESPSIAPNGGMVIYSSI-------------------YDKK-------NVLSMVSIDGRFKARLPATNGRVRAPAWSPF-
>gi|157962385|Shewanella_pealeana|YP_001502419.1| translocation protein TolB [Shewanella pealeana ATCC 700345]  _lim(1-440(1500),440)
TE-GVDAARPIAVIPF--VWQG--------TGPMPSQISDVVMSDLARSGTFSPADELSLPQRGIS----TL-AQFNASAWMAQPAEAVVMGSIK-PYGGDKYLVSFELIDLV-----KAQLQS--DSM--------STKDLVI-----DSRETVISAAQ-FRQYGHRISDVVYEKLTGIRGAFLTRVAYVVVNHGEK---SPYKLMIADY----DGYNEQMLL-RSPEPLMSPSWSPDGQSLAY-VSFENR-------KAEVFVQNIYTQQR-TKIT-SFDGINGAPV-----------FSPDGKKLAVT-LSKDGQPEVYVVDIATK-AIKRVTNH-YAIDTEPSWFPDGKSLLITSERGGR--PQLYRVFLDS-------G---K-ISRLTFE----GEWNLGGSISPDGRSIIFVN--RING--K-----FNIARMDL----ETRF-MQVLT-STRLDESPSVAPNGTMVIYGTT-------------------YQGK-------QVLAAVSMDGRFKARLPAGQGEVKSPSWSPF-
>gi|167623622|Shewanella_halifaxensis|YP_001673916.1| translocation protein TolB [Shewanella halifaxensis HAW-EB4]  _lim(1-440(1500),440)
TE-GIDAARPIAVIPF--VWQG--------TGPMPSQISDVVMSDLARSGTFSPADELSLPQRGIS----TL-AQFNASAWMTQPAEAVVMGSIK-PYGGDKYLVSFELIDLV-----KAQLQP--DSQ--------SAQDLVI-----DSRETIITAAQ-FRQYGHRISDVVYEKLTGIRGAFLTRIAYVVVNHGEK---SPYKLMISDY----DGYNEQMLL-RSPEPLMSPSWSPDGQRLAY-VSFENR-------KAEIYVQNIYTQQR-TNVT-SFDGINGAPV-----------FSPDGKKLAVT-LSKDGQPEVYVVDIATK-AIKRVTNH-YAIDTEPSWFPDGKSLLITSERGGR--PQLYRVFLDS-------G---K-ISRLTFE----GEWNLGGSIAPDGRSIIFVN--RTNG--K-----FNIARMDL----ETRF-MQVLT-STRLDESPSVAPNGTMVIYGTT-------------------YQGK-------QVLAAVSMDGRFKARLPVGQGEVKSPSWSPF-
>gi|24374289|Shewanella_oneidensis|NP_718332.1| tolB protein [Shewanella oneidensis MR-1]  _lim(1-442(1500),442)
TE-GVDAARPIAVMPF--QWQG--------AGAPPQAIADVVMSDLVRSGTFKPLDELGLPQRGIG----AL-AQFDANAWTNVSAEALVVGSVK-PYGADQFLVSFELIDLV-----KAQNQALKGSA--------NPTELLM-----DSRQTVISATQ-FRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHSQK---AAYSLMIADY----DGYNEQMLL-RSPEPLMSPAWSPDGRRLAY-VSFENK-------KAEIFVQDLYTQVR-TKVS-SFSGINGAPS-----------FSPDGKSLAVT-LSKDGQPEIYVIDIATK-AIKRITNH-YSIDTEPSWYPDGKSLLFTSERGGR--PQLYRVDLNS-------G---K-VTRETFE----GEWNLGGSITPDGRSMIFVN--RTNG--K-----FNIARMDL----STRF-MQVLT-STRLDESPSVAPNGTMVIYGTT-------------------HQGK-------QVLAAVSTDGRFKARLPAGQGEVKSPSWSPF-
>gi|217973704|Shewanella_baltica|YP_002358455.1| translocation protein TolB [Shewanella baltica OS223]  _lim(1-442(1500),442)
TE-GVDAARPIAVMPF--VWQG--------PGAAPQAIADVVMSDLVRSGTFKPLDELGLPQRNIG----TA-AQFQANSWSSVGAEALVLGTVK-PYGTDQYLVSFDLIDLV-----KAQNQALKGPV--------SATEFLM-----DSRQTVISAAQ-FRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHTQK---APYQLMVADY----DGVNEQMLL-RSPEPLMSPTWSPDGRRLAY-VSFENK-------KAEIFVQDLYTQVR-TKVS-SFPGINGAPA-----------FSPDGKSLAIT-LSKDGQPEIYIIDIATK-AIKRITNH-YAIDTEPSWYPDGKSLIFTSERGGR--PQIYRVELSS-------G---K-VSRETFE----GEWNLGGSITPDGRSMIFVN--RTNG--K-----FNIARMDL----STRF-MQVLT-STRLDESPSVAPNGTMVIYGTT-------------------YQGK-------QVLAAVSTDGRFKARLPAGQGEVKSPSWSPF-
>gi|120599219|Shewanella_sp.|YP_963793.1| translocation protein TolB [Shewanella sp. W3-18-1]  _lim(1-442(1500),442)
TE-GIDAARPIAVMPF--VWQG--------TGAPPQAIADVVMSDLVRSGTFKPLDELGLPQRNIG----AV-AQFQASAWGSVGAEALVLGSVK-PYGTDQYLVSFDLIDLV-----KAQNQSLKGAV--------SPTEFLM-----DSRQTVISAAQ-FRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHTQK---APYQLMIADY----DGFNEQMLL-RSPEPLMSPTWSPDGRRLAY-VSFENK-------KAEIFVQDLYTQVR-TKVS-SFPGINGAPA-----------FSPDGKSLAVT-LSKDGQPEIYVIDIATK-AIKRITNH-YAIDTEPSWYPDGKSLLFTSERGGK--PQLYRVDLAS-------G---K-VTRETFE----GEWNLGGSITPDGRSMIFVN--RTNG--K-----FNIARMDL----NTRF-MQVLT-STRLDESPSVAPNGTMVIYGTT-------------------HQGK-------QVLAAVSTDGRFKARLPVGQGEVKSPSWSPF-
>gi|114562639|Shewanella_frigidimarina|YP_750152.1| TolB domain-containing protein [Shewanella frigidimarina NCIMB 400]  _lim(1-442(1500),442)
TE-GVDAARPIAVVPF--VWQG--------QGPAPASISDVVASDLSRSGTFKTLDVRALPQSTIS----SV-NGFTAQNWANVEAEALVVGTVK-PYGADQYLVSFELIDLV-----KAQLQAGKGPQ--------NNNELLL-----ESRETVISANQ-FRQYSHRISDIVYEKLTGIRGAFLTRIAYVVVKQGQK---APYHLMIADY----DGYNEQMLL-RSPEPLMSPTWSPDGRRLAY-VSFENR-------KAEIFVQDIYSQTR-TLVS-SFDGINGAPA-----------FSPDGKKLAVT-LSKDGQPEIYVVDIATK-ATRRITEH-YAIDTEPSWFPDGKSILFTSERGGK--PQLYRVSLDT-------N---K-VSRMTFE----GEWNLGGSISPDGRSMIFVN--RTNG--K-----FHIARMDL----ATRF-MQVLS-STQLDESPSVAPNGTMVIYGTT-------------------HQGK-------QVLAAVSMDGRFKARLPVGQGEVKSPAWSPF-
>gi|91792752|Shewanella_denitrificans|YP_562403.1| TolB-like protein [Shewanella denitrificans OS217]  _lim(1-442(1500),442)
TE-GVDAARPIAVVPF--VWEG--------PGAAPQQISDIVMGDLSRSGTFKPLDIRALPQHGIS----SV-AQFAAASWGKVGAEAVVMGSIK-PYGVDQFLVNFELIDLV-----RAQSQALKGPQ--------NNTELVL-----ESRQTVISANQ-FRQYGHRISDIVYEKLTGIRGAFLTRTAYVVVKQGQK---APYHLMIADY----DGYNEQMLL-RSPEPLMSPTWSPDGRRLAY-VSFENR-------KAEIFVQDIYSQTR-TLVS-SYPGINGAPS-----------FSPDGKKLAVT-LSKDGQPEVYVIDIATK-AAKRITDH-YSIDTEPSWYPDGKSLLFTSERGGK--PQIYSVHLDT-------G---K-VSRVTFE----GEWNLGGSITPDGRSMIFVN--RTNG--K-----FHIARMDL----ATRF-LQVLS-STQLDESPSVAPNGTMVIYGTT-------------------HQGK-------QVLAAVSMDGRFKARLPVGQGEVKSPAWSPF-
>gi|71278150|Colwellia_psychrerythraea|YP_268469.1| translocation protein TolB [Colwellia psychrerythraea 34H]  _lim(1-449(1500),449)
TG-GVDSARPIAIIPF--NWTG--------TGERPELLSKVISDDLLRSGKFSPIAIDRFPQT-IS----DA-KAIDYSAWANLGAEAVLLGNIN-EVAPGRYQVSYQLVDVI-----RGQITGGETSML-SNGELVNPKDHIL-----AQSSANIQLNQ-ARRYAHSISNVIYEKLTGSKGAFLSKIAYVIVRDQGK---YPYQLAFADY----DGFNEHVLL-SSKEPLMSPSWHPNGDQLAY-VSFENR-------QAQIHSIDIYTGVR-KSIS-SFNGINSAPR-----------FSPDGKSMAMV-LSKDGNPDLYVMELATM-KLRRITRN-RAIDTEPSWTPDGNSLIFSSERGGK--PQLYRVDLAG-------G---K-VRRLTFD----GEVNLGGSVTPDGKQLIMVN--RTRG--K-----YRLAKQEL----SSGL-FQVLT-ETRLDESPSVSPNGGMIIYSTL-------------------HNNR-------QVLGLVSVDGRFKARLPALDGQVKAPAWSPF-
>gi|109899246|Pseudoalteromonas_atlantica|YP_662501.1| TolB-like [Pseudoalteromonas atlantica T6c]  _lim(1-451(1500),451)
TE-GIDSARPIAIVPF--KWNG--------PGQMPESLSEVVSGDLLRSGKFSPIDSTDMPGQ-PH----ND-NELDYSAWAATGVEAILVGSVT-PEGPDRYRVNFTLVDAI-----RGQITGGNARAL-SGGKLTNSNDHIL-----DSRQTVITGQG-FRQYAHRISDVVYEKLTGEKGAFMTRIAYVVVRDRKTNE-FPYQLVVADY----DGVNETMLL-RSKEPLMSPSWSPDGTKLAY-VTFENK-------RSQIYIQDLYTMSR-TQMT-DFPGINSAPV-----------FSPNGRQLAMV-LSKDGNPEIYVMDVASK-RLERITRN-RAIDTEPSWTPDGKSLIFSSERGGK--PQIYRVDLAS-------N---N-VRRVTFD----GEMNLGGTITPDGGRMVMVN--RTRG--N-----YHIAAQDL----ENGN-IQVLT-KTYLDESPSIAPNGSMIIYSTL-------------------HQGK-------QVLSLVSLDGRFKARLPASDGQVKSPSWSPFL
>gi|33519798|Candidatus_Blochmannia|NP_878630.1| translocation protein TolB [Candidatus Blochmannia floridanus]  _lim(1-460(1500),460)
TH-GINTAHPIAVIPF----INNENITHELNNDNIEDIASIIAADLRNSGKFNTLPIAYLPYQPSK----LTDIIPTF--WEKLGINTVVLGAI--NIKNENYVISYQLIDTS-----NNP-------------------ALVI-----LDNQYEIEKKH-LRYTAHTISDEIFEKLTGIKGVFCTRIAYILYTNNIK---YAYELCTSDY----DGHNQVSIC-RSSEPLMSPAWSPDGKKLAY-VTFASG-------HSELIIQTLTNRSI-DNII-QFPNHNGAPA-----------WSPDGKKLAFS-LSKTGSLNLYIMDLSSN-NIQQITSN-RYNNTEPSWFPDSQNLAYTSDQGGV--PQVYKININN-------N---RDSHRISWL----NGSNQKPNISMDGTFMVMVN--RNKG--K-----QYISKLNF----LTGE-EETLTADSVLADTPSISPNGIMFMYSSIILNNSSSELYLDKKFTNIPDNNQ-------SILSLASIDGKFKAHLNGSTGSIRFPTWSSLS
>gi|50085692|Acinetobacter_sp.|YP_047202.1| translocation protein TolB [Acinetobacter sp. ADP1]  _lim(1-425(1500),425)
AK-APEQAPKIAIVPF----------------GNDQSIFPIVENDLNRSGRFSSASKN-LPTTASI-------DAIQASAWQAAGIPYVVVGNLK-PAANNAFEVHYQLYDVQ-----KQQ---------------------YL-----LNEVLTVPASR-VRQAAHMISDAIYQALTGIAGDFSGRIAYVLRNPATPD--QRYTLQIADT----DGEQPKTVL-SSRDPILSPAWTPDAKKIAY-VSFETK-------RPAIYLQDLATGQR-EVLA-SFKGLNGAPS-----------FSPDGKSMLFT-ASMNGNPEIYQMDLSTR-QLQRMTND-NAIDTEARYAPDGKSFIFTSDRGGS--PQIYRYSFDD-------S---S-TKRLTFR----GAFNARGTLSADGKNIALVH--RPSG-SN-----YKVAIMNI----STGI-VNILT-PTSLDESPSFSPNGQMVVYATY-------------------EGSR-------GLLSIMSTDGRFRMNLPSEQGEVREPAWAP--
>gi|114319404|Alkalilimnicola_ehrlichii|YP_741087.1| TolB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]  _lim(1-428(1500),428)
IG-GQEGAMPVAVIPF--AVTG-------EIPTPDQDIARVISDNLARSGRFEVLPREELVAR-PA----GL-DDTRFSAWRALGMDYLVTGRM--EMDGHRVSVTFELLDVF-----RGN---------------------RI-----EGRRYRLHPDN-LRSLAHAISDIVFEEVVGLPGVFGTQIAYVQVEERNDQ--RIHRLMVADA----DGQRPREIL-ESRQPIMSPAWSPERDRLAY-VSFEGG-------RSEIYVQNLRSGQR-DRIA-SFRGINSAPA-----------WSPDGRHLAVT-LSRDGRANIYLLRLDDG-HVRRLTDH-WAIDTEPTFSPDGERIAFTSDRGGR--PQVYTLAVNGP------G---G-VERVTFD----GDYNARPNWSPDGRRIAMVH--RHNG--S-----FRIAVHDL----ESDR-TRVLT-DGPWDESPVFAPNGDMIMYSAG-------------------GSGD-------SRLRTVSVHGRANQALPRAGGLTREPA-----
>gi|52841801|Legionella_pneumophila|YP_095600.1| TolB colicin import protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]  _lim(1-419(1500),419)
TQ-GINSALPIAINSF-------------GSNAAAQEIGNVIENDLTISGQFKIISGPQGAN-----------SQSSVSTLRQLGADSVVTGRV--NQVGNRIEVSFTLADAV----ANGN---------------------IL-----LTKTFQINANQ-VRALAHHISDEVYQKLTGERGIFSTRIAYISVQRNGGR--SRYSLEVADA----DGHNPQSLL-VSSEPIMSPSWSPNGKSISY-VSFEKK-------KAEIFTVSVETGQR-RLIT-SFPGINGAPA-----------WSPDGQHLAVV-LSKSGTPKIYDVDLSSG-SMKQLTFG-NSIDTEPRYSPDGRSLLFTSGRGGS--PQVYRLSLAD-------G---Q-ISRVTFE----GNYNARASYTPDMKHIVMLH--REDR--Q-----FNIGVQNT----GGGP-ISNLT-FSGLDESPSVSPNSRLVLYATR-------------------YQDR-------GVLGIVSIDGRIRMRLPAREGDVQEPAWSPYL
>gi|209364240|Coxiella_burnetii|YP_001425326.2| TolB [Coxiella burnetii Dugway 5J108-111]  _lim(1-440(1500),440)
TK-GVTAAIPIAIMPF--AGPS-------VLAPGDETIPQVIKNDLQNSGQFRVTGSGNLDQTAAS----L--EQIDYSYWRKQKVNALVVGAIN-PLGMRRYRVAFTLINVF----DSNN---------------------RL-----LSESFNVNAKE-LRNLAHHISDLIYQKLTGVRGVFSTKIAYVLVQASSENTAAKYTLEVADA----DGFNPQPLL-VSDMPIMSPTWSPDGNKIAY-VSFEGH-------RAAIYLQDLATGRR-QRLS-EAPGINGAPA-----------FSPDGKQLALV-LTKTGNPKIYILNLADG-HLREITKG-WSIDTEPAWSPDGKSLLFTSNRDGT--PQIYNYSFAD-------G---S-INRVTYR----GDYNARPSFMPDGKSIIMMH--RENG--L-----FGIARQDL----STGQ-VQILS-ESGTDESPSLAPNGKMAIYAME-------------------YGGR-------GVLAQVSIDGQIKLRLPARNGNVQEPAWSPYL
>gi|53804448|Methylococcus_capsulatus|YP_113693.1| translocation protein TolB [Methylococcus capsulatus str. Bath]  _lim(1-424(1500),424)
SQ-GVEGAIPVAVVPF------------ANQGSLSDSLSQIVSADLQRSGRFRTLAESAMQER-PT----AP-DQVQQAAWQALGQDFVVVGQIR-PSGDG-YEADFHVVDVI-----RGT---------------------LV-----VSYRLPFGRAE-TRQAAHRIADVIYKAITGEPGAFATRVAYVSVSGEGAN--RRYNLQVADT----DGYNPQSVI-VSNEPIMSPAWSPDGTKIAY-VSFESR-------RSAIYVQTLATGER-RKVS-DAPGINGAPA-----------FSPDGSRLALT-LSKDGNPDIYVMNLGSG-GLTRITDY-SGIDTEPNWSRDGRSIVFTSDRGGK--PQLYLVSASG-------G---P-AERLTYE----GDYNARGVFSPDGRSLAMVH--GKGG--D-----YRIAVMDL----ASRA-VRVLT-SGPLDESPGFAPNGSMILYAAR----------------------R-------GQLAAVSIDGKVRQSLRIEGGAVREPAWS---
>gi|77163683|Nitrosococcus_oceani|YP_342208.1| hypothetical protein Noc_0145 [Nitrosococcus oceani ATCC 19707]  _lim(1-434(1500),434)
TG-GTEAALPIAIVPF-----------QNEGSTPPENVAAVIAADLARSGRFAPLPEEDLISR-PR----NA-SDIQFQDWRRLGSEGLVIGKVI-SLGADRYEVRFQLFDIY-----KEE---------------------QL-----VGRRYQVPAAG-LRHLAHQIADLIYETLTGEKGIFTTHIAFVTVSRAAHGA-KQYSLQVADV----DGHNPHTIL-RSKEPILSPAWSPDGTQLAY-VSFERR-------RSEVFVQELRTGQR-QSVA-SFSGINSAPD-----------WSPDGGKLALV-LSKEGNPEIYIRDLATG-RLTRLTHN-TAIDTEPAWAPDGGSIVFTSDRGGR--PQLYQIPVSG-------G---R-AQRLTFD----GAYNASASFAPDGRRLALIH--GDKG--Q-----FHIAVLNL----QSKE-LQVLT-ETRMDESPSFAPNGRMILYATS-------------------SPQG-------GVLAAVSTDGRVRQRLAQQGDEVREPAWS---
>gi|34495564|Chromobacterium_violaceum|NP_899779.1| translocation protein TolB [Chromobacterium violaceum ATCC 12472]  _lim(1-428(1500),428)
IG-GGASRHAISVLPF------------KDEGPTQGNLTPVIRNDLALSGAFRLIDPSAVANV-PF----EP-ADIRYPLWQAAGAQSLAIGKVE-SAGGGQIKISFRLMDAS-----QRK---------------------QL-----TGGEFTVTPDR-SRQVAHAIADMIYEAITGQKGFFNTRLAYVL-----KSG-RSYALQISDV----DGQRSQTIL-RSTEPIISPSWSPDGRHIAY-VSFASQ-------KPVVWVQDLATGQR-RAVA-NFKGSNSAPA-----------WSPDGSKLAVV-LTTSGNSQIYIINAAGG-PARRLMYN-GGIDTEPAFSPDGSMVYFVSDRSGN--PQIYRVPVNG-------G---N-AQRVTWE----GAYNVSPKLSPDGKTLVYIR--RSAG--N-----FRVMSQDL----ATND-SRQLS-DGSYSERPSFAPNGRMVLYSSD-------------------AGGQ-------SVLYAATADGSSKVKLAVLNGDVQDPAWGPFN
>gi|187479385|Bordetella_avium|YP_787410.1| translocation protein TolB [Bordetella avium 197N]  _lim(1-441(1500),441)
SG-TGATQYPIAIADF------------AGDDVRGRALAEVIRADLTRTGQFRLINAAGSGLT-------VD-SPINYDDWRGRGADYVAYGSIS-QGADGRFEIRYRLADTV-----KKN---------------------QL-----DGVAFSGTEPE-LRRIAHQIADRIYEKITGVRGVFATRIAYVL-----KQG-NTYELQVADA----DGQNPQVAL-RSREPIISPTWSPDGSKLAY-VSFHSG-------KPVVYVQTLATRSQ-IPVA-NFKGNNSAPA-----------WSPDGSQLAVA-LTQDGLSQIYIVSADGSAKPRRITRS-PGIDTEPTFTPDGRSIIFTSDRSGG--PQIYQVGLDG-------G---D-ARRLTFN----GSYNISPRISPDGSTLLYVA--RRDG--A-----FRIASLNL----PTGT-ETLLT-DGRDDQSPSFAPNGMQVLYAAT-------------------QNGR-------SVLAGVSSDGRVRQTLSVLNGEIREPTWGPFT
>gi|163854963|Bordetella_petrii|YP_001629261.1| translocation protein TolB [Bordetella petrii DSM 12804]  _lim(1-439(1500),439)
SG-TGATQYPVAIADF------------AVDDVHGRAIAEVIRADLTRTGQFRLISAAGSGLN-------VD-SPVAYDDWRTKGADFLAYGSIT-RGADGRYDVRYRLADTV-----KKG---------------------QL-----DGVAFSGSEQE-LRRVAHQIADRIYEKITGVRGVFSTRIAYVL-----KRG-NTYELQVADA----DGQNPQVAL-RSREPVISPAWSPDGSKLAY-VSFESG-------KPVVYVHTLATSAR-IPVA-NFKGNNSAPA-----------WSPDGSKLAVA-LTRDGLSQIYIVGADGSSNMRRLTRS-PGIDTEPIFTPDGRSIIFTSDRSGG--PQIYQTSLDG-------G---D-ARRLTFN----GSYNISPRISPDGSTLLYVA--RRDG--A-----FRIASLQL----ATGN-ETLLT-DGRDDQAPSFAPNGMQILYAAV-------------------QNGR-------SVLAGVSSDGRVRQTLSVLNGEIREPTWGPFT
>gi|124266539|Methylibium_petroleiphilum|YP_001020543.1| translocation protein TolB [Methylibium petroleiphilum PM1]  _lim(1-421(1500),421)
SG-VGATQLPIAVVKF------------RDEEKAPQPVGAIVRADLERSGVFRNLDTSGVVLD-------EG-SQPAMSDWRGRSADALVGGSVT-RLADGRFDVRYRLWDVV-----KGR---------------------DL-----GGQSYAVPAGD-LRLAAHRIADAIYEKLTGEKGVFSTRIAYVT-----KGG-GRFTLWVTDA----DGEGGQSAL-ASPEPIISPAWSPDGRELAY-VSFESR-------KAVVYVQEVASGKR-RTLA-SFRGSNSAPA-----------WSPDGRQLALT-LSRDGGSQLFVMGRDGE-GVKRLTSS-GAIDTEATWAPDGKSIYFVSDRGGS--PQIYRVPAGG-------G---N-AERVSFS----GSYNISPAISPDGRTMAYIS--RDGG--A-----FRVQVMDL----ASGT-ARAVS-DTKDDESPSFAPNGRLIIYATR-------------------DGGR-------DVLMTTTTDGKIKARLVSTQADVREPVWGPYG
>gi|121604951|Polaromonas_naphthalenivorans|YP_982280.1| TolB domain-containing protein [Polaromonas naphthalenivorans CJ2]  _lim(1-429(1500),429)
SG-VGMTQLPIAIAPF------------RGEAQSPQKIGSIVKADLERSGMFRGVDAGGVVAD-------EN-TRPDLASWRQKGADAMVTGSVS-PLADGRFDVRLRLWDVV-----REQ---------------------DL-----GGQSYTVTKSD-LRLSAHRVSDFVYEKLTGEKGIFSTRIAYVT-----KAG-QRYTLWVADS----DGESAQSAL-ASPEPIISPAWSPSGAQLAY-VSFESR-------KPVIYSHDVATGKR-RLLA-NFRGSNSAPA-----------WSPDGSQLVAT-LSQAGGSQIYSIGLNGG-DPKRLTQS-SSIDTEPAFSPDGRLIYFVSDRGGS--PQIYRMSPAG-------G---N-AERVTFT----GSYNISPVVSPDGRWLAYVS--RVGG--G-----FKLHVMEL----STGT-VTSIT-DTSADESPSFAPNSRLIVYATQ-------------------QQGK-------EALMTTTLDGKIKARLSGAGGDIREPDWGPFQ
>gi|186477204|Burkholderia_phymatum|YP_001858674.1| translocation protein TolB [Burkholderia phymatum STM815]  _lim(1-430(1500),430)
TG-VGSTQFPIATANF------------ANEANSPQQISTIVRQDLQRSGKFTNIDAGSAPVS-------EG-DSVDLGAWKAKGANAFVAGSVT-KLPNGQYQVRFKLYDTV-----NQQ---------------------SL-----GGLELVSPEGG-LRMSAHKVADYIYAKLMGGRGVFATRLSYVI-----KTG-NRYQLQISDS----DGQDAHIAL-SSPEPIISPAWSPDGTKVAY-VSFEKK-------KPIVYIHDLPTGRR-VVVS-DQKGNNSAPA-----------WSPDGRTLAVA-LSRTGNTQIFAVNADGS-GLRRLTQG-SSIDTEPSYSPDGQSIYFTSDRGGQ--PQIYKMPASGEASG---G-----AQRVTFT----GNYNTSPRVSPDGKQLAYIS--RTGG--G-----FKLYIQDL----QSGV-ATALT-DTTHDESPSFAANGQYILYATQ-------------------VNGR-------GVLAAVSTDGRTRQVLSVQGGSVREPSWGPFM
>gi|241662341|Ralstonia_pickettii|YP_002980701.1| translocation protein TolB [Ralstonia pickettii 12D]  _lim(1-434(1500),434)
SG-VGASQYPIAIANF------------QGEAQAPQNLSAIVRADLARSGRFSNVDVAGAVV--------PESPAPDLGAWKSKGAAAFVGGTV--TRNGDRYEIRFRLYDTA-----KGE---------------------SL-----GGLSLTRGPGQ-LRLAAHEIADYIYQKLIGERGVFATRLSYVS-----KVG-RRFQLQISDS----DGANPQIAL-TSNEPIISPSWSPDGTKVAY-VSFESK-------KPVVYVHDLVAGRR-TVIS-NQKGNNSAPA-----------WSPDGRHVAVS-LSRDGNTQVYLVNADGS-GLRRLSRS-SAIDTEPSFSPDGRYIYFTSDRGGA--PQIYRMSVDGEEA----G---A-AQRVTFK----GNYNTSPRVSPDGKLLAYIS--RVGG--A-----FRLYTQDL----SNGD-VNALT-DTSNDESPSFAANGKFILYATR-------------------VGGK-------SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM
>gi|17545454|Ralstonia_solanacearum|NP_518856.1| translocation protein TolB [Ralstonia solanacearum GMI1000]  _lim(1-432(1500),432)
AG-AGSSQYPIAIANF------------QGESQIPQDITAIVRADLVHSGRFSNVDVAGAVV--------PDSPAPDLGAWKSRGAAAFVGGTV--TRNGDRYEIRFRLYDTA-----KGE---------------------SL-----GGLALTRGEGQ-LRLAAHEIADYIYQKLIGDRGVFATRLSYVS-----KVG-RRYQLQISDS----DGANPQVAL-TSNEPIISPAWSPDGTKVAY-VSFESR-------KPVVYVHDLISGRR-AVIS-NQKGNNSAPA-----------WSPDGRRVAVA-LSRDGNTQIYQVNADGS-GLRRLTRS-SAIDTEPSFSPDGRSIYFTSDRGGA--PQIYRMPTEGEDA----G---S-AQRVTFK----GGYNTSPRVSPDGKLLAYIS--RVGG--A-----FKLYVQDL----SNGD-VTGLT-DTSYDESPSFAANGKFILYATR-------------------VGGR-------SVLAAVSTDGRTRQILSLQAGTVREPAWGPFM
>gi|82703827|Nitrosospira_multiformis|YP_413393.1| translocation protein TolB [Nitrosospira multiformis ATCC 25196]  _lim(1-441(1500),441)
FG-GGANQIPVAIVPF-----------SGEEGLGAQSLTPVISADLQRTGLFKLVDPGGLRPHEP--------VEVSFPDWINRGASALAIGTAI-PVSGGQISIRVRLLDVA-----RQA---------------------EL-----GSYVETVAPEQ-LRAAAHRIADMIYEKLTGDVGVFSTRIAYVI-----KQG-KKYSLQVADA----DGFNAQPVI-EYTEPIISPAWSPDGTRLAY-VSFENK-------KPVVYVQTLATRTR-KAVA-NFRGSNSAPA-----------WSPDGRKLAVV-LSVMGGSQIFLINSDGG-GLQRLTQS-SGIDTEPSFSPDGRYIIFTSDRGGS--PQIYRMPVTG-------GVSKV-AERLTFE----GSYNVSPRYSPDGKGFTFIH--RSGD--R-----FNVAIQDF----ATGQ-VRLLT-DSRFDESPSFAPNGRMVLYATE-------------------IRGR-------GILSAVSSDGRTRQQLSTQTGDIREPAWGPLR
>gi|30248242|Nitrosomonas_europaea|NP_840312.1| translocation protein TolB [Nitrosomonas europaea ATCC 19718]  _lim(1-425(1500),425)
FG-GGTNKIPIAIAPF------------NGERGLPQSISAIVSADLERTGLFKLVDTLGLTSQEP--------EQIRYIDWQGRGASALVVGSIS-PLPDGRIDVRFRLLDVV-----KQT---------------------QL-----TGFSGAVTTEQ-LRAFAHRIADIVYETLTGEPGAFSTRIAFVR-----KQG-SQYALQVSDY----DGFNARSLI-EYTEPIISPAWSPDGSRIAY-TSFEKK-------KPVVYVQTLATRER-KAVA-NFKGSNSAPA-----------WSPDGSKLAVV-LTLHGGSQIYLINADGS-GLQRISQS-PGIDTEPSFSPDGRWLMFTSDRGGS--PQIYRMPVSG-------G---V-AERMTFE----GDYNVSPHYSPDGKRFVYIH--RNAG--R-----FNVAIQDL----STRQ-MQLLT-DSNFDESPSFSPNNRMILYTTE-------------------IGGR-------GILSTVSSDGQAKSRLSQEAGNIREAVWGPLL
>gi|114330316|Nitrosomonas_eutropha|YP_746538.1| translocation protein TolB [Nitrosomonas eutropha C91]  _lim(1-423(1500),423)
FG-GGANRMPIAVAPF------------NGEKGLPQDISAIVSADLERSGIFKLVDPLGLTSQ----------EPVSYVDWLGRGASALVIGSTS-MLPDGRVDIQFRLLDVA-----KQV---------------------QL-----TGFSGTVTIEQ-LRAFAHRIADIVYEALTNEPGVFSTRIAFVR-----KQG-SRYALQVSDY----DGFNARSLI-EYTEPIISPAWSPDGSKIAY-TSFEKK-------KPVVYVQALATRER-KVVA-NFKGSNSAPA-----------WSPDGGKLAVV-LTLHGGSQIYLINADGS-GLQRISQS-PGIDTEPSFSPDGKWLIFTSDRGGS--PQIYRMPVSG-------G---A-AERLTFE----GDYNVSPRYSSDGKRFVYIH--RNSG--R-----FSVAVQDL----STRQ-MQLLT-DSSFDESPSFSPNSRMVLYTTE-------------------VSGR-------GILSIVSSDGQTRSRFSQEAGDVREAVWGPLL
>gi|71909662|Dechloromonas_aromatica|YP_287249.1| translocation protein TolB [Dechloromonas aromatica RCB]  _lim(1-437(1500),437)
TG-AGANRIPVTIVDF------------PGDPTAARVVTATVRADLERSGLFKLVDNGTAAFD-------EN-APVNHAEWKGKGADALAAGSIA-RSTDGRMEARFRLYDTQ-----KGV---------------------SL-----GGAAYVTNNSQ-LRAAGHRIADFIYEKLTGEKGVFSTRIAYVV-----KAR-GQFLLQIADS----DGQNAATAL-SSTEPIISPVWSPDGGRLAY-VSFEKK-------KPVIYVHTLASGQR-HIVA-NFKGSNSAPA-----------WSPDGRKLAVV-LSKDGNSQIYSVNADGS-GLQRITQS-SGIDTEPRYSADGGTIYFTSDRGGS--PQVYQVGASG-------G---D-AKRVTFE----GSYNVSPRPAPDGKSLAFIS--RREG--R-----FQLAVMDL----ASRQ-VQVVS-DSNKDESPSFAPNSRMILIATE-------------------IGGR-------GVLSAVSSDGRIKQRLSVAAGDVREPAWGPYY
>gi|217969213|Thauera_sp.|YP_002354447.1| translocation protein TolB [Thauera sp. MZ1T]  _lim(1-425(1500),425)
TG-TGASRFPVIIPIF------------ENEGRLPQSVTDVVRADLERSGLFTLIDTGPLPM--------PESVAPDLAAVRSRGADAVLTGSLI-PMADGRYDVRFRLFDAQ-----KQQ---------------------EL-----GAMSLPMSPAQ-NRLVGHRIADFVYEKLTGLPGYFATRIAYVI-----KSG-PNFELQIADA----DGMNAATAL-RSREPIISPSWSPDGQRLAY-VSFEQK-------KPIVYVHTLATGQR-RVVA-NFKGSNSAPS-----------WSPDGSQLAVV-LTKDGLSQLYAIGADGS-GVRRLAQS-SGIDTEPFWGADGH-IYFTSDRGGS--PQIYRIPASG-------G---S-AQRVSFE----GNYNVTPRLSFDGKLLAFIT--RNAG--R-----FQVAVQDV----ATRQ-TTILT-DSARDESPSFAPNGRMILYATD-------------------TGGR-------GVLSAVSTDGRIRQRLTVQAADVREPAWGPQI
>gi|74318224|Thiobacillus_denitrificans|YP_315964.1| translocation protein TolB [Thiobacillus denitrificans ATCC 25259]  _lim(1-427(1500),427)
VG-GAANKIAIAMVPF-----------QTAAGQPSPPLTQIVADDLARSGQFSMTDVTGAA-Q-PV----EP-SQVDYAAWRTKGAEAMVIGQVV-ALGGGRFEVRFRLLDVV-----KGT---------------------QL-----AGYSYKITAAQ-WRATGHRIADVVYEKLTGIPGAFSSRIAYVQ-----KQG-KRYELRVADA----DGQNPRTIV-RSLEPLISPMFSPDGTRLAY-VSFEDK-------KPVVYVQSLQQGGR-RKVA-AFKGSNSAPA-----------WSPDGRQLAVV-LTRDGASQIYLINVDGS-GLTRLMRS-GDIDTEPVFSPDGQTLYFTSDRGGS--PQIYRVAKSG-------G---D-AKRVSFE----GSYNVSPTISPDGRYLAYIS--RDGG--R-----FRVVLQEL----ASGQ-TRVLT-ETTRDEAPSFAPNGQAVLYATV-------------------QGGR-------GVLGTVTLDGKTRARLSESGVDAREPAWG---
>gi|91776691|Methylobacillus_flagellatus|YP_546447.1| TolB-like protein [Methylobacillus flagellatus KT]  _lim(1-415(1500),415)
VG-GAAQQIPIAVVPF--AQQG------VIPGQ-QDTIANVIGADLRRSGLFRVLETRGVANQ-PS----DI-SQVNYQDWAAIQAQALTIGNIE-TLPGNRLKVSFRLLDVY-----KQS---------------------QL-----VGMEYNITPSQ-LRLTAHKIADVIYQKLTGEQGVFATRIAYVS-----KSG-GRYALQVADS----DGYNPQTVV-SSAEPIISPVWSPDGTKLAY-VSFEKK-------KPIIYVQSLVSGQR-TVLA-NFKGNNSAPA-----------WSPDGKRLAIV-LTHAANSQIYSINADGT-GLQQLTRT-TAIDTEPTWSPDGRYIYFTSDRGGS--PQIYRMPSSG-------G---E-ASRMTFE----GSYVVSPRLSPDGKSLAYIR--RDGG--Q-----FRVALQDL----QTGQ-VQVLS-DGPKDESPSFAPNGRMLLHATR-------------------VGGR-------GALAAVSADGRVKQRLSESGGDVREPAWGPII
>gi|254000100|Methylovorus_sp.|YP_003052163.1| Tol-Pal system beta propeller repeat protein TolB [Methylovorus sp. SIP3-4]  _lim(1-424(1500),424)
VG-GAAQQIPIAVVPF------------AKTPGAQDDIATVVGADLRRSGLFRVLETRGVVNQ-PH----DL-PEVKYPEWAAIQAQALTIGSVE-TLPGGRLKVSFRLLDVL-----KQN---------------------QL-----AGLEFNIAASQ-QRATAHKIADIIYEKLTGEPGVFSTRIAYIT-----KTA-GRYALQVADA----DGFNPQTVM-SSNEPVISPRWSPDGTKLAY-VSYEKK-------KPIVFVQSLVTGQR-NVVA-NFKGNNSAPA-----------WSPDGNRLAIV-LTHSANSQVYVINADGT-GLKQLTYT-TSIDTEPVWTPDGSAIYFTSSRGGG--PQIYRMASTG-------G---D-AKRVTFD----GNYNVSPRISPDGKTLAYIK--QDNG--K-----FRVAVQDV----ASGQ-VQVLS-DTAQDESPSFAPNGRMILYATS-------------------ISGR-------GALAAVSADGRVKQRLSETGGDVREPAWGPAA
>gi|83647596|Hahella_chejuensis|YP_436031.1| translocation protein TolB [Hahella chejuensis KCTC 2396]  _lim(1-430(1500),430)
DK-GSRAAIPVAVVPF--ANES--------GQPLAEDIGQIFTEDLKRSGDIEPLDRTKMVSI-PS----KA-EEIYFRDWGLLGQRYLLVGGVQYDAPSQVYKVRYELYNVQ-----SQQ---------------------RV-----IGKIISGKSEK-LRDMGHAIADAVYEAVTGIRGVFSTRIAYVTLEKSGAK--NIYRLEVADA----DGRRSTELL-KRSMPIISPAWSPDGKKLAY-VSFESQ-------RPAIYVQDVDTGTR-TQVT-SFKGLNSAPT-----------WSPDGTKLAVT-LSKDGNAELYVLDLRNN-SLKRLTNH-WAIDTEASWSPDGRTIAFTSDRGGG--PQIYLVDASG-------G---S-PRRLTFE----GRYNSRPRFSVDGKKVYYVH--QRDG--S-----FNVASLDL----ESGQ-DQILT-QTEMDESPSVAPNGSMIIYATQ-------------------KNGK-------GVLAVVGVNSGSKYTLPAQFGDVREPAWSPYI
>gi|92113976|Chromohalobacter_salexigens|YP_573904.1| translocation protein TolB [Chromohalobacter salexigens DSM 3043]  _lim(1-428(1500),428)
TK-GSDQAIPIAIVPM------------ANGDDLPENVSRIVSNDLERSGRFEPLPRESLISR-PS----SS-EEVHYQDWQQLDSDYLVVGKI--DNQGGEYRIQYELLNVN-----GQN---------------------RM-----LGEVVTSSRDQ-LRDSAHYISDQIFEEITGIRGAFSTSIAYVTASGVGDD--IDYALSVADA----DGHNSQQIL-SSDEPILSPAWSPDGGKLAY-VSFETG-------RPGIYVQNLATGQR-VRLT-SFEGINGAPA-----------WSPDGRKLAMS-LSKDGQPEIYVMDIASR-DLRRLTQS-DAIDTEPEWAPNGRSLIFTSDRSGN--PQIYRYDLGS-------G---R-AERLTFT----GSYNSRGRFSPDGDAIFMVT--RDDS--G-----YHVARQDL----DTDR-MTILT-DSDWDESPSVAPNGTMVIFATQ-------------------EGTR-------GVLGAVSADGSASFRLPSPQGDVREPAWSPFL
>gi|15596169|Pseudomonas_aeruginosa|NP_249663.1| translocation protein TolB [Pseudomonas aeruginosa PAO1]  _lim(1-432(1500),432)
SS-GNDRAIPIAVVPF--GFQG--------GNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQ-PA----QA-SEVIFRDWKAVGVNYVMVGNI--VPAGGRLQVQYALFDVG-----TEQ---------------------QV-----LTGSVTGSTDQ-LRDMSHYIADQSFEKLTGIKGAFSTKMLYVTAERFSVDN-TRYTLQRSDY----DGARPVTLL-QSREPIVSPRFSPDGRRIAY-VSFEQK-------RPRIFIQYVDTGRR-EQIT-NFEGLNGAPA-----------FSPDGNRLAFV-LSRDGNPEIYVMDLGSR-ALRRLTNN-LAIDTEPFWGKDGSTLYFTSDRGGK--PQIYKMNVNS-------G---A-VDRVTFI----GNYNANPKLSADEKTLVMVH--RQQGYTN-----FQIAAQDL----QRGN-LRVLS-NTTLDDSPTVAPNGTMLIYATR-------------------QQDR-------GVLMLVSINGRVRIPLPTAQGDVREPSWSPYL
>gi|167035189|Pseudomonas_putida|YP_001670420.1| translocation protein TolB [Pseudomonas putida GB-1]  _lim(1-423(1500),423)
TS-GSDRATPIAVVPF--GLQG--------GSVLPEDIADIIGNDLRNSGYYSPIPRQNMISQ-PS----QA-SEVIFRDWKALGAQYVMVGSI--VPSGGRLQVQYALFNVA-----TEQ---------------------QV-----LTGSVAGSTDQ-LRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNN-TRYTLQRSDY----DGARAVTLL-QSREPILSPRFAPDGKRIAY-VSFEQK-------RPRIFIQNIDTGRR-EQVT-NFEGLNGAPA-----------WSPDGSRLAFV-LSKDGNPDIYVMNVASR-QISRVTAG-PGINTEPFWGKDGNTLYFTSDRGGK--PQIYKQSVSG-------G---G-AERVTFV----GNYNANPKLSADEKTLVMIH--RQQGFTN-----FKVAAQDL----QRGS-VKILS-ETSLDESPTVAPNGTMLIYATR-------------------QQGR-------GVLMLVSLNGRVRLPLPTAQGEVREPSWSPYL
>gi|229592295|Pseudomonas_fluorescens|YP_002874414.1| translocation protein TolB [Pseudomonas fluorescens SBW25]  _lim(1-433(1500),433)
TS-GSDRATPIAVVPF--GWQG--------GSVLPDDMAQIVSDDLRNSGYYAPIPKGNMISQ-PN----QA-SEVVFRDWKAVGAQYLMVGNI--TPAGGRLQIQYTLFNVA-----TEQ---------------------QV-----LTGSVSGTAEQ-LRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVDN-TRYTLQRSDY----DGARAVTLL-QSREPILSPRFAPDGKRIAY-VSFEQR-------RPRIFVQHIDTGRR-EQIT-NFEGLNGAPA-----------WSPDGSRLAFV-LSKDGNPDIYVMNMASR-QISRVTSG-PGINTEPFWGKDGSTIYFTSDRGGK--PQVYKANVNG-------G---G-AERVTFI----GNYNANPKLSADEKTLVMIH--RQDGFTN-----FRVAAQDL----QRGT-VKILT-DTNLDESATVAPNGTMVIYATR-------------------QQGR-------GVLMLVSINGRVRLPLPTAQGEVREPSWSPYL
>gi|66044663|Pseudomonas_syringae|YP_234504.1| translocation protein TolB [Pseudomonas syringae pv. syringae B728a]  _lim(1-433(1500),433)
TS-GSDRAAPIAVVPF--GWQG--------GSVLPEDMAEIISNDLRNSGYYAPIPKQNMISL-PT----QA-SEVIFRDWKALGAQYVMVGNI--TPAGGRLQIQYALFNVA-----TEQ---------------------QV-----LTGNVSGTNDQ-LRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENN-TRYTLQRSDY----DGARAVTLL-QSREPILSPRFAPDGKRIAY-VSFEQK-------RPRIFVQHIDTGRR-EQIT-NFEGLNGAPA-----------WSPDGSKLAFV-LSKDGNPEIYVINLASR-QLSRVTND-SSIDTEPFFGKDGSTLYFTSDRGGK--PQIYKTNING-------G---G-AERVTFV----GNYNANPKLSADEKTLVMIH--RQDGFTN-----FKVAVQDL----ARGS-VKILT-DSNLDESPTVAPNGTMVIYATR-------------------QQGR-------GVLMLVSINGRVRLPLPTAQGEVREPSWSPYL
>gi|146306309|Pseudomonas_mendocina|YP_001186774.1| translocation protein TolB [Pseudomonas mendocina ymp]  _lim(1-432(1500),432)
SH-GADRATPIAVVPF--GWQG--------GSVLPEDMSQIIGNDLRNSGYFEPIPRQNMISL-PT----QA-SEVIYRDWKALGAQYVLVGNI--VPNGGRLQVQYALFNVN-----TEQ---------------------QV-----MTGNVGGGTDQ-LRDMAHHIADQSFEKLTGVKGAFSTRLLYVTAERMGANN-TRYTLQRSDY----DGARAVTLL-QSREPILSPSFAPDGRRIAY-VSFEQR-------RPRIFVQHIDTGRR-EQIT-NFEGLNGAPA-----------WSPDGNRLAFV-LSRDGNPEIYVMDMGSR-QMRRITNH-YAIDTEPFWGKDGQTLYFTSDRAGR--PQIYKTNINS-------G---A-VERVTFV----GNYNANPKLSADEKTLVMIH--RQDGFTV-----FKVAAQDL----ETNR-LRILS-DTSLDESPTVAPNGTMLIYATR-------------------QQGR-------GVLMLASTNGRVRLPLPTAQGEVREPSWSPYL
>gi|146283138|Pseudomonas_stutzeri|YP_001173291.1| translocation protein TolB [Pseudomonas stutzeri A1501]  _lim(1-384(1500),384)
--------------------------------MLPEDMAEIIGNDMRNTGIFQPIPRQNMISM-PT----RG-SEIIYRDWKALGAQYVMVGNI--EPAGGRLQARYEVFNVT-----TEQ---------------------QV-----MSGTVGGSPDQ-LRDMAHHAADQSFEKLTGIKGAFSTRLLYVTAERMGGAN-TRYTLQRSDY----DGARAVTLL-QSREPILSPRYSPDGRRIAY-VSFEQK-------RPRIFVQHIDTGRR-EQIT-NFEGLNGAPA-----------FSPDGNRLAFV-LSKDGNPEIYVMDLGSR-QLQRLTNH-YAIDTEPFWGADGQTIYYTSDRAGK--PQVYKQRLGS-------N---S-AERVTFV----GNYNANPKLSADEKTLVMIH--RQDGYTN-----FKVAAQDL----QRGN-LRILS-DTSLDESPTVAPNGTMLIYATR-------------------QQGR-------GVLMLVSINGRVRLPLPTAQGEVREPSWSPYL
>gi|198282216|Acidithiobacillus_ferrooxidans|YP_002218537.1| Tol-Pal system beta propeller repeat-containing protein TolB [Acidithiobacillus ferrooxidans ATCC 53993]  _lim(1-422(1500),422)
TK-NVASALPIAIPSF------------GPGIAGQPSVAEVVRNDLRHSGLFRVIDPAGYPAD-PR----AP-GGVKAADWTAVGATGLAVGSVE-PRNGG-YAVNVYVYNVS-----TGQ---------------------EL-----TAHRFTCSAAE-LHMTAHHVADVIYQAFTGKPGPFASRIAYVR-----QTG-ANYELLVAES----DGWNPHPIV-RGRMPVFSPVWSPDNRRLAY-VTYANA-------RAVIYVQDLATGQR-QSIA-PGGEIVSAPA-----------FSPNGTELAYA-RSSGGHTELYVANLQTG-QRRQLTHD-DAINTSPTWSPDGSRIIFVSDRAGG--PQIYAMNASG-------G---A-AHRLSYD----GSYNASPVYSPAGNAIAFIH--RTNG--V-----YALAVMNP----DGSG-VRVLD-AQGNCDHPSFAGNGQMILYGTQ-------------------RGGR-------KVLAEVSLDGKTMAILHSNAGEDSQPAWS---
>gi|118602525|Candidatus_Ruthia|YP_903740.1| TolB domain-containing protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)]  _lim(1-424(1500),424)
LK-QDENAFPIVISDF--SVIG--------DANQGKIIAHVIRNNFNRSGEFSASSVNYVIN-----------NKPNFDKWKAKKIEAIVLGKLE-KISKKVFNVEIELLDVF-----SKK---------------------IL-----YKDKFVVHNRG-IRRIAHYLSDQIYHVLLGEKGSFDTRLAYISVTNKGKGE-REYRLEISDS----DAQNPQTIL-KSKKPILSPVWSPDQNKIAY-VSFKNA-------RSEVFIQYPFVRRKTQKLP-YFDGIASAPS-----------WHPNGKNLLLT-LSKNGNKDIYSYQLSSK-KLTRLTTD-VGIDTEASYSSEGDKIVFTSNRSGQ--VQVYIKDLKT-------N---K-INRATFK----GRYNAKAVFSPDDKSLAMVH--RVGK--D-----YRIALLDI----ATKN-LTIMT-NNQLDESPFFSPNGSMIIFATN-------------------KGSS-------SVLSVVSILGRQTFELASKAGEVREPNWSHYL
>gi|108760781|Myxococcus_xanthus|YP_633893.1| tolB protein [Myxococcus xanthus DK 1622]  _lim(1-431(1500),431)
SG-ANFRPLPVAVPAP--LTQN------DGAKALVAPFDSAFSFDLTASGILQVLDRKGFTADAKE--GMAA-ASINFSRWADVGAEALVKVSL--AQDGGVLRGELRLFNVG-----TGR---------------------ED-----LKVSKDAPADN-ASLLAHRLADALYRHFTREPSPFLSRITYVR-----KAG-TNRDVYVADW----DGGNARALT-KGGINIL-PALSQDGSQVAF-TTYRKN-------RPDIYVQS-PGGEA-KAVI-SGGQMATGAA-----------FSPDGKRIAYS-LAEGESAQVYVANADGS-GARALTDTPYGLNTSPTWSPDGKRIAFVSNRGGS--PQVYIMNADGT------G-----VRRLTFQ----GNYNQTPDWSPRGDLIVFTA--RDER-NA-----FDLFTVSV----ETGK-VTRLTQDQGSNEEPAFSPNGRLIVFTST-------------------RNGG-------SQLYVMTADGNNQLPLRTEKGTYQTPDWSPLP
>gi|78224723|Geobacter_metallireducens|YP_386470.1| WD-40-like beta propeller repeat-containing protein [Geobacter metallireducens GS-15]  _lim(1-429(1500),429)
TA-AGTHKLTLTVDSP--RRLG-----GSDAPQVARETAEALQFDMVLAGPFTVTAPSAAAASAGI----RP-GEFDFAPWRGAGVDLLVKSGY--TVTGNAMTMEFRLYNVT-----QGK---------------------EI-----LAKRYTGRPGD-VRRIAHTFSDDIMAALTGERGPFTGKIAFVS-----TRA-GAKAIFLMDY----DGHNVQQLT-KNRSINLNPDFSPSGKEIIF-TSYRQG-------NPDLFRRELFTGAE-ARIS-SYRGINATGA-----------WSPDGKTIALT-LSKDGNSEIYTISRDGK-NPHRLTNT-SAIEVSPAWSPDVRKIVFVSDRLGK--PQIFIMNADGT------G-----VRRLTTS----GNYNVSPRWSPKGDRIVYSR--QEGG--------FQIYAINP----DGTN-DTRLT-SEGSNEHPRWSPDGRFITFSST-------------------RGGG-------EGIYVMRADGSGQTRVSGGKGRDSHPTWSPR-
>gi|85858720|Syntrophus_aciditrophicus|YP_460922.1| tolB protein [Syntrophus aciditrophicus SB]  _lim(1-496(1500),496)
DS-PAFQKIPIAVADFAPLNGN------QGHADLSSWFPGAVRKTLDLTGYFNILNRTGGPRDQSQ-TGAVQ-AQAAYGEWRSLGAEYLIQGGF--SSRGTQLVAEFRLIDIV-----QGR---------------------QL-----MGKQYTGGFED-RRDMVIRFVQEVLSLLTGGEGFFDTRIAFVV-----RQG-RSSSLHTVGFGSQIDGRDLARVA-GSPSLILSPRWSPDGRYLAF-SSYRDG-------KPDIFVVSPSGSGL-KKIV-SFQGLNLPGA-----------WSPDGRSLLLT-LSKDGNEEIYVMDVRSG-QVRRLTRN-SAIDVSPVWSPDGRRIAFVSNISGS--PQIYVMNADG-------G---D-VRRLTYS----GNYNTTPAWSPRGGKIAYEG--KVGS--G-----YQIFSIDE----DGGN-VRQLTSGAGDHEFPSWSPDGRFLTFSLR-------------------SGGR-------SRINILNANTLEVRTLYESTDRCLGPAWSPRL
>gi|189346278|Chlorobium_limicola|YP_001942807.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobium limicola DSM 245]  _lim(1-444(1500),444)
RK-QGAGKIALVLDRS--DAKG------SKESGLAQNLDSVVKEGLIFSDLFSVLPPPSNVRTGSE----GKGLAVNFGALSSVGAEVYAGGTV--SRKSGKVNLDMEVYDTF-----GTK---------------------LL-----MKKTYTGSEDQ-LRAMGHAFCADLIELLTGKKSYFGSKIVFVS-----NKT-GSKEIYQCDF----DGQGIQQLT-NFRSISLTPVFSPDGTRLAY-TSYTSG-------KPTLYIRSMSDNSI-AAVG--KNGVSVDPG-----------WR-NGSEVATT-LSFEGDQEIYLIRSDGG-ISRRLTNS-RGIDVSPTFSPDGKQMAFVSSRNGM--PQIFVQDVQS-------G---Q-TRRLTYS----GRYNTQPSWSPSGDKIAYST--WEKS-GE-----INIFVINA----DGSG-VKRLTSGVRENESPSWSPDGSMIVFTSN-------------------RQGG-------KKLYVMSSTGGSQRRLLQMDGEQMQPSWSLF-
>gi|194337187|Pelodictyon_phaeoclathratiforme|YP_002018981.1| WD40 domain protein beta Propeller [Pelodictyon phaeoclathratiforme BU-1]  _lim(1-440(1500),440)
RK-EGSGNIVLVLDKL--HADG------KKESRFGQGLDTVMHDGLDFAGIFSMLPPPLNIMDNSD----KKSVVINFGALTSVGAEVYAGGTV--TIKSGMINLDMSVYETA-----GSR---------------------LL-----LRKTYTGKEDE-LRSIGHAFCADLVALLTGKSSVFGSKIVFVS-----NNT-GYKEIYQCDF----DGYGVEQLT-NSRSITMNPSLSPDGRHLAY-IDFSSG-------RSVLRIQNLGERKT-ASVG--NSGVSIDPA-----------WR-SGSEVAAT-LSFDGNQQIYLVKTDGT-LSRRLTNS-RSIDISPAFSPDGSKMAFVSSRNGL--PQIFIQDIQS-------G---Q-VKRLTFS----GRYNTQPSWSPAGDKIAYTT--WEKN-GE-----INIFTVSA----DGSG-LMQLTRRCGENICPSWSPDGQMIVFSSN-------------------RSGK-------QKLYTMDSKGDKQRALLQVDGQQTQPSWSL--
>gi|145219969|Chlorobium_phaeovibrioides|YP_001130678.1| WD40 domain-containing protein [Prosthecochloris vibrioformis DSM 265]  _lim(1-442(1500),442)
RK-EGSGKIALVLSIP--AASG------GKESGWAERLDVESRSGLDFTGLFSLIPPPLNVAGPRG----SSSQSINFGALNSVGAEFYAGGAV--VQKSGNVVLSMEVYDTL-----GGR---------------------PI-----LRKTYTGKESD-LRSIAHAFCADLVELLTGRPSVFGSKVVFVS-----NRS-GFKEIYMCDY----DGHGMRQMT-NTRSLALTPVLSPDGQHLAY-TDYASG-------RPRLSILDLAGGKR-RSVA--RSGNSIDPG-----------WRSNA-EVATT-LSFQGDQEIYLVRPDGS-LARRVTNS-RGIDLSPSFSPDGNKMAFVSSRTSA--PQIFILDLQT-------G---Q-TKRLTYN----GSYNTQPSWSPQGDKIAYST--MEKN-GE-----INIFTINT----DGSS-LRQLTSGSRQNESPSWSPGGDMIVFTSS-------------------RQGQ-------KKLFVMNAAGGGQRRLLQLEGEQMQPSWSLRL
>gi|193212307|Chlorobaculum_parvum|YP_001998260.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobaculum parvum NCIB 8327]  _lim(1-434(1500),434)
RK-EGSGRISIILDHL--KSNG------GKESEWARSLDSTIQGGLDFTGLFNLMPAPLNIRNAQN-------GALNLGAVRSIGADVFVGGSV--TKQSGDPAMQMQVWDV------TGK---------------------LL-----LNRKYSGQDKA-LRDIGLRFCADLVEMLTGKRSVFGTKMVFVS-----NST-GQKEIYMCDF----DGTNIRQLT-NTKSISLTPSVSPDGRFLAW-TDFSSG-------RPDLYIKNLSTGST-VSVK--KQGVCISPA-----------WRPGTNECATT-LSYEGSQDLYLIRADGT-VARRLTRG-HSIEVSPSFSPDGSKMAFVSTREGP--PQIFIQDLSS-------G---S-VRRLTYS----GTYNTQPSWSPSGDKILYSS--LQKN-GE-----INIFMINV----DGSN-LLQLTSGARNNEYPSWSPDGSMIVFSST-------------------RAGS-------RKLYVMNVDGTNQRPLLNMKGEQQQPSWSIR-
>gi|21673468|Chlorobaculum_tepidum|NP_661533.1| TolB protein, putative [Chlorobium tepidum TLS]  _lim(1-434(1500),434)
RK-EGASRIAVVLDKT--SADG------GKQREWARSLDVTINKGLDFTGLFNLLPAPLNIRNGQN-------GGLNFASIASVGGDIYAGGSV--TKRSGRPVLEMHVYDS------SGK---------------------SL-----LARTYTGEESQ-LRAIGLRFCADLVELLTGKRSVFGTRIVFVA-----NRT-GNKEIYMCDF----DGENVVQLT-NSRSISLTPAVSPDGTYIAW-TDYTSG-------KPNLYIKNIATGAK-VSVN--KHGVCISPA-----------WRPGTNTLVTT-LSYEGDQDLYLIRADGT-VERRLTKG-GGIDVSPTFSPDGSKMAFVSTRQGG--PQIFIQDMNS-------G---Q-VRRLTYS----GIYNTQPSWSPNGDKILYSS--MQKS-GE-----INIFSINV----DGSG-LLQLTSGSGNNEHPSWSPDGSMIVFSST-------------------RDGR-------RRLYVMNADGSNQRPLLNMQGEQQQPSWSVS-
>gi|189500640|Chlorobium_phaeobacteroides|YP_001960110.1| WD40 domain-containing protein beta Propeller [Chlorobium phaeobacteroides BS1]  _lim(1-444(1500),444)
TK-AGADRIPLVLRSV--DVER------SKDAQYANGIDRVIKNGLEFSGLFAILNSPMNLISGGNIYQTGK-RQINFPALSSVGAEVYAGGVL--KRKGNTLHMDMEVYDAL-----TGK---------------------LL-----MRKLYEGKRED-TRSLGHRFCDDLVRLFTGKPSIFGSKIAYVS-----RRN-GKKEIYLADF----DGYGEVPVT-RTGGLALTPALSSDGSQLAY-LTYTRG-------RPDLQIKDLSKKTV-VSVT--RKGVKIDPA-----------WRKGSTELATT-FSFDGNQEIYLVRKNGS-IVRRLTRD-RGIDLSPSFSPDGRYMAFVSSRHGL--PQVFIMDLNS-------G---S-TKRLTFK----GKYNTQPAWSPVNDKIAFTT--MQKN-GE-----IDIFTVNA----DGTG-LKQLTYRARQNEAPSWSPDGTMIVFSSS-------------------RGGA-------SKLYVMNADGRNQRSLKLA-GEQMQPCWSSF-
>gi|218780986|Desulfatibacillum_alkenivorans|YP_002432304.1| hypothetical protein Dalk_3146 [Desulfatibacillum alkenivorans AK-01]  _lim(1-442(1500),442)
NN-PFLRKIPIAIKDFEPKTVN------EEPRQAAVQAKEWLVSGLEFVRYFQILPEESYIIGDGE--GLTA-QTINFANWVSIGADHLVTGGL--DLRDGVLVLELRLFDVP-----RNR---------------------LI-----VGKRYKGRVED-MRKMIRRFCVEIVTELTDSRGVFGTKIAFVS-----NGP-GNKEIFACEY----DGFDPQQLT-SGSKIALSPAWSGDGTHMAY-VSYADG-------PPEIFIRNLAQKRG-VKVA--YKGINVTPA-----------WDPTRFALAAT-LSLNGDQEIYSLTGNGK-IIKKLTNN-WGIDVSPSYSPDGKRMAFVSNRGGS--PQIYIMELDT-------G---Q-TSRVTFD----GKYNSAPAFSPRGDRIAYCG--MVDG--T-----FDVFTVRT----DGTD-LQRLTDHPGDDEEPSWSPDGTLIAFSTT-------------------REGK-------AKIYVMTSHGTDQRKLLELEGAQTQPAWSPWL
>gi|92118972|Nitrobacter_hamburgensis|YP_578701.1| translocation protein TolB [Nitrobacter hamburgensis X14]  _lim(1-450(1500),450)
DQ-GNVAPLPIAIPNF--VAGS------PSDSEVGAGVAKVITNNLKRSGLFAPIDQAAYIEKITN----ID-VPPQFANWKTINAQALVTGRMT-RQGDGRLKAEFRLWDVA-----TGQ---------------------QL-----AGQQYFTSPEY-WRRIAHIISDQIYERLTGEKGYFDSRVVFVDES-GAAQH-RIKRLALMDQ----DGANVRYLT-RGADLVITPRFSPSTQEITY-MEFGQG-------DPRVYLFNIETGQR-EIVG-NFPGMSFSPR-----------FAPDGQRIIMS-LQQGGNSNLFVMDLRSK-STTRLTDT-PAIDTSPSYSPDGGRICFESDRGGR--PQIYVMGATG-------G---A-AQRISFG----EGSYSTPVWSPRGDYIAFTK--QGGG--Q-----FSIGIIKP----DGSG-ERILT-SGFHNEGPTFAPNGRVLMFFRD-------------------PGGNSG-----PSLYTIDVSGRNELKVPTP-GFASDPAWSPLL
>gi|91978608|Rhodopseudomonas_palustris|YP_571267.1| translocation protein TolB [Rhodopseudomonas palustris BisB5]  _lim(1-449(1500),449)
TE-GNVAPLPIAIPNF--VAGT------PSDNEVGGGVSQVITNNLKRSGLFAPIDQAAYLEKITN----ID-VPPQFKSWTSINAQALVTGRMT-RQPDGRLKAEFRLWDVA-----TGQ---------------------QL-----AGQQYFTSPEY-WRRIAHIISDQIYERLTGEKGYFDSRVVFIDES-GPADR-RVKRLALMDQ----DGANVRYLT-RGSDLVLTPRFSPSTQEITY-MEFGQG-------DPKVYLFNIETGQR-EIVG-NFPGMSFAPR-----------FSPDGQRIIMS-LQQGGNSNLFVMDLRSK-TTTRLTDT-PAIDTSPSYSPDAARICFESDRGGK--PQIYIMPAGG-------G---Q-AQRISFG----DGSYSTPVWSPRGDYIAFTK--QGGG--Q-----FAIGIMKP----DGSG-ERILT-SGFHNEGPTFAPNGRVLMFFRD-------------------PGGNAG-----PSLYTVDVSGRNELRVPTP-GYASDPAWSPLL
>gi|32699699|Bradyrhizobium_japonicum|Q89ED5.2|TOLB_BRAJA RecName: Full=Protein tolB; Flags: Precursor _lim(1-454(1500),454)
DP-TEFQPVPIAITNF--LPGS------PSDGDVGNGVTQVITNNLKRSGLFAPIDQAAFIERISN----ID-VAPQFQNWKTINAQALVTGRMT-RQPDGRLKAEFRLWDVV-----SGQ---------------------QL-----AGQQYFTSPEY-WRRIAHIISDQIYERMTGEKGYFDSRVVFVDET-GPKER-RVKRLAMMDQ----DGANVRYLT-RGSDLVLTPRFSPNSQEITY-MEFGQG-------DPKVYLFNIETGQR-EIVG-NFPGMTFAPR-----------FSPDGQRVIMS-LQQGGNSNLFVMDLRSR-STTRLTDT-PAIDTSPSYSPDGTRICFESDRGGR--SQIYVMAAGG-------G---A-AQRISFSKDDTNATYSTPVWSPRGDYIAFTR--QGGG--Q-----FSIGVMKP----DGSG-ERLLT-SGFHNEGPTFSPNGRVLMFFRD-------------------PGGSGG-----PSLYSVDISGRNELKVPTP-GFASDPAWSPLL
>gi|148258089|Bradyrhizobium_sp.|YP_001242674.1| translocation protein TolB [Bradyrhizobium sp. BTAi1]  _lim(1-462(1500),462)
LP-GEFAPIPIAIPPF--VPGG------AGDADVGNGISQVITNNLKRSGLFAPVDPAAFPERIAN----FE-APPQFASWRPLALQGLVTGRAT-RQPDGRLKAEFRLWDPN-----SGQ---------------------QL-----TGQQYVTAPEY-WRRIAHIISDQIYSQMTGEKGYFDSRVVFVDES-GPSER-RVKRLALMDQ----DGANVRYLT-RGADLVLTPRFSPSSQEITY-MEFGQG-------DPKVYLLNIETGQR-EIVG-NFPGMSFSPR-----------FSPDGQRIILS-LQQGGNSNLFVMDLRSR-TTTRLTDT-PAIDTSPCYSPDGNQICFESDRGGK--PQIYVMPANGG------G-----AQRISFG----EGSYSTPVWSPRGDYIAFTK--QGGG--Q-----FAIGIMKT----DGSG-ERILT-SGFHNEGPTFSPNGRVLMFFRD-------------------PGGTAG-----PSLYTIDVSGRFEQKVPSP-GYASDPAWSPLL
>gi|158422148|Azorhizobium_caulinodans|YP_001523440.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571]  _lim(1-450(1500),450)
TS-GTPQPIPIAVTDF------------IGEGDQGRAISGVITADLKRSGLFAPIDPKAFVEQISN----PD-LAPRFQDWRVINAQGLVTGRVT-RQGDGRLKAEFRLWDVF-----AGQ---------------------QL-----MGQQYFTQPEN-WRRVAHIIADAIYERLTGEKGYFDTRIVFVDES-GAKDR-RVKRLAIMDQ----DGANVTYLT-RGDALVLTPRFSPTSQEITY-MSYAQG-------EPRVFLLNIETGQR-EIVG-NFPGMSFAPR-----------FSPDGQRVIMS-LQQGGNANIFVMDLRSK-ATTRLTDT-PAIDTAPCYSPDGRQICFESDRGGS--SQIYVMNADGS------G-----QRRISFG----NARYNTPVWSPRGDVIAFTR--QAEG--K-----FAIGVMRP----DGQG-ERVLT-EGYHNEGPTFAPNGRVIMFFRD-------------------PPGGGG-----PNLFTIDVTGYNEQRVPTP-SYGSDPAWSPLR
>gi|154246985|Xanthobacter_autotrophicus|YP_001417943.1| beta-propeller repeat-containing to-pal system protein TolB [Xanthobacter autotrophicus Py2]  _lim(1-450(1500),450)
TP-GAFKPIPIAITDL------------LGEVEIGRNISGVITADLRRSGLFAPIDPKAFVEQITN----PD--TPRFQDWRVINAQALLTGRVT-RQADGRFQVVFRLWDVF-----AGQ---------------------QL-----AAQQFVAQPDN-WRRIAHIIADAIYEKMTGEKGYFDTRIVFVDES-GPKER-RVKRLAIMDQ----DGANVSYLS-RGDGLVLTPRFSPTSQEITY-MSYGAG-------DPKVFLLNIETGQR-EIVG-NFPGMSFSPR-----------FAPDGQRVIMS-LQQGGNSNIFVMDLRSR-ATTRLTDT-AAIDTAPCYSPDGRQICFESDRGGT--SQIYVMNADGS------G-----ARRISFG----NARYSTPVWSPKGDWIAYTR--QAEG--R-----FAIGVMRT----DGSG-ERVLT-EGYHNEGPTFAPNGRVIMFFRD-------------------PGGASG-----PSLYSVDVTGYNEQRVPTP-SYASDPAWSPLR
>gi|13473330|Mesorhizobium_loti|NP_104897.1| translocation protein TolB [Mesorhizobium loti MAFF303099]  _lim(1-436(1500),436)
NK-GNVEPLPIAITDF------------QGGDALGAQISQIVTADLKRSGLFAPIDKSAFIEKISN----PD-AAPRFDDWKVINAQALVTGSVS-KEADGRIRAQYRLWDTF-----AGQ---------------------QM-----SGEQFFANDAN-QRRVAHIIADAIYERLTGEKGYFDTRVVFIDES-GAKNA-RKKRLAIMDQ----DGANVRYLS-DGRSIVLTPRFSPNRQEITY-MSYESG-------QPRVYLLQIETGQR-ELVG-NFPGMTFAPR-----------FSPDGQKVIMSLLRDDGNSNIFAMDLRSR-STTRLTNS-TAIDTSPSYSPDGSKVVFTSDRGGR--AQIYVMGADGS------G-----QTRISFG----DGVYSTPVWSPRGDLIAFTK--QTGG--E-----FQIGVMKT----DGSG-ERILS-SGFQQEGPTWAPNGRVLMFFRD-------------------SNGG-------PKLVSVDLTGRNEQPIPTA-NFASDPAWSPLL
>gi|110635500|Chelativorans_sp.|YP_675708.1| translocation protein TolB [Mesorhizobium sp. BNC1]  _lim(1-439(1500),439)
NR-GVVEPVPIAITDF------------LSAGGRGAEISAVIAADLKRSGLFAPIDRGAFIEKISN----PD-VAPRFEDWKVINAQAIVTGRVT-EEPGGRLKAEFRLWDTF-----AGQ---------------------QL-----VGEQFFAKPAD-WRRVAHIIADTIYEQFTGEKGYFDSRIVFVDES-GSKEN-RVKRLAIMDQ----DGANYRALT-DGRSIVLKPSFSPQRQEITY-VSFEGG-------QPQVYLLQIETGQR-ELVGNNFPTMSFASR-----------FNPVGDKIIMSLLRTDGNSNIYTMDLKTR-TTARLTDT-NAIDTSPSYSPDGNKVVFTSDRGGR--AQIYVMNADGS------N-----PQRISFG----DGTYSEPVWSPRGDLIAFTK--QSGG--Q-----FQIGIMRT----DGSG-ERILS-TGFQIEGPTWSPNGRVIMFFRQ-------------------DAGAAG-----PKLYSIDLTGRNEQLIPTP-NFASDPAWSPLL
>gi|15966492|Sinorhizobium_meliloti|NP_386845.1| translocation protein TolB [Sinorhizobium meliloti 1021]  _lim(1-436(1500),436)
NK-GNVEPLPIAITDF-------------LQGELAQKISGVIAADLKRSGLFAPIDKGAFIEKISN----PD-ATPRFEDWKVINAQALVIGRVT-QEGDGRLKAEFRLWDTF-----AGQ---------------------QM-----LGQQFYTQPEN-WRRVAHIIADAIYERITGEKGYFDTRIVYVAES-GPKNA-RKRQLAIMDQ----DGANSRALT-NSNDIVLTPRFSPNRQEITY-MSFENQ-------QPRVYLLQLETGQR-EVVG-NFPGMTFAPR-----------FSPDGQRVIMS-LQQEGNANIYTMDLRSR-TTTRLTNT-AAIDTSPSYSPDGSRIVFESDRGGK--QQLYVMGADGS------G-----QTRISFG----DGSYSTPVWSPRGDLIAFTK--QSGG--K-----FSIGVMKP----DGSG-ERILT-TGFHNEGPTWAPNGRVLMFFRQ-------------------NAGAGG-----PQLYSIDLTGYNEQLVQTQ-GFASDPAWSPLM
>gi|159185873|Agrobacterium_tumefaciens|NP_356906.2| translocation protein TolB [Agrobacterium tumefaciens str. C58]  _lim(1-435(1500),435)
NK-GNVEPLPIAITDF------------MSSDGIGAQVSAVIAADLQRSGLFAPVNKNAFIEKISN----PD-QQPRFEDWKVINAQALVTGRVT-RESDGRLRAEFRLWDTF-----AGQ---------------------QL-----SGQQFFTQPEN-WRRVAHIIADAIYERVTGEKGYFDTRVVFVSES-GPKTA-RKRQLSIMDQ----DGFNVRNLT-NSNDIVLTPRFSPNRQEVTY-MSFEGQ-------QPRVYLLQLETGQR-EVVG-NFPGMTFSPR-----------FSPDGQKVIMS-LQQDGNANIYTMDLRSR-TTTRLTNT-AAIDTAPSYSPDGQRVAFESDRGGR--QQIYVMNADGS------G-----QQRVSFG----DGSYSTPVWSPRGDLIAFTK--QSGG--K-----FSIGVMKT----DGSG-ERILT-SGFHNEGPTWAPNGRVLMFFRQ-------------------NAGAGG-----PQLYSIDLTGYNEQLIKTP-TFASDPAWSPLL
>gi|209550776|Rhizobium_leguminosarum|YP_002282693.1| translocation protein TolB [Rhizobium leguminosarum bv. trifolii WSM2304]  _lim(1-435(1500),435)
RK-GNVQPMPIAVTDF--------------QGDLGAQVSQVIAADLQRSGLFAPINKTAFIEKISN----PD-AAPRFEDWKVINAQALVTGRVT-KEADGRLRAEFRLWDPF-----AGQ---------------------QM-----TGQQFYTQPEN-WRRVAHIIADAIYKQITGEEGYFDTRVVFVSES-GTKQQ-RKRQLAIMDQ----DGFNVRMLT-DGSDLVLTPRFSPSRQEVTY-MSFANQ-------QPRVYLLQLETGQR-EVVG-NFPGMTFSPR-----------FSPDGQKVIMS-LQQDANSNIYTMDLRSR-TTTRLTST-AAIDTSPSYSPDGARVSFESDRGGK--PQIYVMNADGS------G-----QTRISFG----DGSYSTPVWSPRGDLIAFTK--QAGG--K-----FSIGVMKP----DGSG-ERILT-TGFHNEGPTWAPNGRVLMFFRQ-------------------AAGAGG-----PQLYSIDLTGYNEQLVKTP-SYGSDPAWSPLM
>gi|23502555|Brucella_suis|NP_698682.1| translocation protein TolB [Brucella suis 1330]  _lim(1-443(1500),443)
NK-GVIEPLPIAITDF------------LSADQLGSNITSVIAADLERSGLFAPIDKGAFIEKISN----PD-AAPRFEDWKVINAQALVTGRIT-KQPDGRLKAEFHLWDTF-----GGQ---------------------QM-----IGQQFFTTPDN-WRRVAHIIADAIYERLTGDKGYFDTRVVFVDES-GPAQK-RVKRLAIMDQ----DGANVRFIS-DGRALSLTPRFSPNRQEVTY-MSFEGG-------SPKVYLLQLETGQR-ELVG-NFPGMTIAPR-----------FSPDGQKVVMSLLQDDGSANIYTMDLRNR-TTTRLTSS-QAIDTGASYSPDGSQIVFTSDRGGR--PQLYVMGADGS------N-----PRRISMG----DGSYSTPVWSPRGDLIAFTK--QSQG--Q-----FSIGVMKT----DGSG-ERLLT-SGFHNEGPTWAPNGRVLMFFRK-------------------AAGAGG-----PKLFTIDLTGRNERQIQTP-NFASDPAWSPLL
>gi|182677268|Beijerinckia_indica|YP_001831414.1| beta-propeller repeat-containing to-pal system protein TolB [Beijerinckia indica subsp. indica ATCC 9039]  _lim(1-448(1500),448)
RPGGEFKPVSIAVTTF------------AGDGSGPSHPTSIIINNFRRSVFLNPLDPKSFVSDVSN----PD-QAPQMDAWKTINAQFVVTGRSA-RSADGRLQTEFRLWDVT-----SGQ---------------------QI-----AGQQYVTDPNN-ARRVAHIISDTIFSRITGEKGFFDTRVVFVDET-GARDH-RRKRLAIMDQ----DGANVRYLT-RGDDLVVTPRFSPSSQDITY-MSFGAA-------DPKVLLLNIETGQR-EVVG-NFPGMTFSPR-----------FSPDGQKIVMS-LSQGASSNLFTMDLRSR-NTTRLSDS-SSIDTSPSYSPDGTQIVFESDRGGT--QQIYMMSAAGG------G-----TRRVSFG----DGRYSTPVWSPRGDYIAFTR--QKGS--S-----FGIGVMKP----DGSG-ERILT-EGFHNEGPTWAPNGLYIMFFRD-------------------ASGQGG-----PRLFMVDLYGRGEFPVPTP-SFASDPAWSPLL
>gi|209965095|Rhodospirillum_centenum|YP_002298010.1| translocation protein TolB [Rhodospirillum centenum SW]  _lim(1-451(1500),451)
TK-GVTEPMPIAITTF--LGGT------PQEQTVARQISSVITANLERSGLFQPLDPARFIQTPEQ----LASAPPRFADWRLIGAQALVAGGVQ-AQPDGRLRVQFRLFDVV-----YGK---------------------QL-----TGLAYFTQAEG-WRRVAHIISDAIYKRLTGEEGYFDTRVVYIAES-GPANQ-RVKRLAIMDQ----DGENNRFLT-DGRVLVLTPRFSPTAQEITY-LSYFNN-------KPRVYLFNIDTGRQ-ELLG-DFPGMTFAPR-----------FSPDGNQVIMS-LAQSGNTDIYTLDLRTR-RQTRLTDH-PGIDTAPSYSPDGKQIVFESDRGGT--QQLYTMNADGS------N-----VKRITFG----QGRYATPVWSPRGDLIAFTR--LNGG--R-----FYIGVIRP----DGTG-ERLLT-EAFHVEGPTWAPNGRVLMYFKE-------------------KPVGAGARQRQSRLFTIDLTGVNERQMVTA-TDASDPAWSPLI
>gi|83592430|Rhodospirillum_rubrum|YP_426182.1| translocation protein TolB [Rhodospirillum rubrum ATCC 11170]  _lim(1-443(1500),443)
TR-GVREPMPIAIPVF--GGTD------AQSSAMGRDVVGVVSNDLQGSGLFRVLDPAAYIQSLPN----LA-VQPQFADWRAINAQALVQGEVQ-PQGDGRLRVAFRLWDVF-----SGQ---------------------QV-----VGRAFLTQGDN-WRRVSHIIADEIYKAITGEEGYFDTRVVYVAET-GPKTN-RVKKLAIMDQ----DGANQRNLT-NGESMVLTPRFSPTAQEITY-LSYYNS-------VPRVYLFNIETGRR-ELLG-DFPGMTFAPR-----------FSPDGNKVIMS-MALDGNTEIYEMDLRTR-RSSRLTNH-PSIDTSPSYAPDGRQITFNSDRGGA--QQIYVMNADGS------G-----VQRISFG----DGRYATPVWSPRGDLIAFTK--LKGG--R-----FFIGAMRP----DGSG-EKILT-EGFLVEGPTWAPNGRVLMFFRQ------------------DPNGR-------TTLHSIDVTGYNERQISTP-TEASDPAWSPLL
>gi|170747178|Methylobacterium_radiotolerans|YP_001753438.1| beta-propeller repeat-containing to-pal system protein TolB [Methylobacterium radiotolerans JCM 2831]  _lim(1-445(1500),445)
GG-GNFQPMPIAIADF------------GGDPSLAGLVSGVVTNDLRRSGYFTPLDHARFPEQ-PN----FD-AAPNFEKWRATGVQGLVTGRV--VREGGRVKVEFRLWDVT-----NGQ---------------------QM-----TGQQYGTDAAN-VRRTGHLISDGVYTKITGLGPWFDSRIAFVDET-GPKEN-RRKRLMVMDQ----DGANVRAIT-TGEMSIVAPRYSPATQDIAF-MAQATG------HQPRVQMINLETGSR-QALG-NVDSMSASPR-----------FSPDGRKIVMS-VQQGGNADIVTMDLASK-AQRSITNG-MAIDTSPTYSPDGSQIAFESDRGGS--QQVYVMGADGS------N-----PHRITFG----PGSASQPAFSPRGDLIAYTR--QRNG--G-----FAICVSKP----DGSG-ERVLT-EGFHNEGPTFAPNGQYVLFFRD-------------------PGGQGG-----GKLFMVDITGKVEQPVPTP-AYASDPTWSPLL
>gi|163854156|Methylobacterium_extorquens|YP_001642199.1| beta-propeller repeat-containing to-pal system protein TolB [Methylobacterium extorquens PA1]  _lim(1-446(1500),446)
GS-GAFQPMPIAVADF------------AGDASLGTLVASVITNNLRRSGYFTPLEKGRFPEN-PS----FD-AAPNFEAWKGAGVQALVTGRVG-RDASGRLTVAFRLWDVA-----SGQ---------------------QI-----TGQQYGTDVAN-ARRTGHLVSDAVYTKVTGLGPWFDSRVAFVDES-GPKEN-RRKRLMVMDQ----DGANVRALTGGGDVSVVAPRYSPAGQDIAF-MTQAPG------QQPKVQMIDLETGKR-QTVG-NFASMSASPR-----------FSPDGRRLVMS-VQQGGNADIVTVDIASK-AQTPVTQG-LAIDTSPSYAPDGSQIVFESDRGGS--QQIYVMGADGS------N-----PRRLSFG----EGSASQPAWSPRGDLIAFTR--QRKG--G-----FAICVMKP----DGSG-ERVLT-EGFHNESPTFAPNGQYVMFFRD-------------------PGGQGG-----GKLYMVDITGKVEQPVPTP-SFASDPTWSPLL
>gi|220924307|Methylobacterium_nodulans|YP_002499609.1| Tol-Pal system beta propeller repeat-containing protein TolB [Methylobacterium nodulans ORS 2060]  _lim(1-442(1500),442)
GPGGSFQPMPIAVADF------------SGDPSLAPLVAGIVTSNLKRSGYFVPIEKARFPET-PN----FD-AAPRFAAWKEAGAQGLVTGRVS-RDASGGIKAEFRLWDVL-----AGQ---------------------QM-----IGQQYAGSAAN-ARRMGHLISDAVYTKITGIGGFFDTRIAFVDES-GSKER-RRKRLAIMDQ----DGANVRYLT-SGEAAVVAPRYSPATQDITY-MSQITG------QQPRVQVINLETGAR-QVIP-TKAEMSTSPR-----------FSPDGRRLVMS-DQDGGNASIYVMDLASK-AQTRVTNA-NAIDTSPSFSPDGREIVFESDRGGQ--QQIYVMGADGS------N-----PRRISFG----EGSASQPAWSPRGDYIAFTR--QRKG--S-----FAICIMKP----DGSG-ERVLT-EGFHNEGPTWAPNGQYVLFFRD-------------------PGGQAG-----GKLYMVDITGRVEQPVPTP-SYASDPSWSPLI
>gi|170741556|Methylobacterium_sp.|YP_001770211.1| beta-propeller repeat-containing to-pal system protein TolB [Methylobacterium sp. 4-46]  _lim(1-442(1500),442)
GSGGAFQPMPIAVADF------------AGDPSLAPLVSGIVANNLKRSGYFVPIDRARFPET-PN----FD-AAPNFAAWKEAGAQGLVTGRVT-RDASGGVKAEFRLWDVL-----SGQ---------------------QM-----IGQQYAGGSGN-SRRMGHLISDAVYTKITGIGGFFDTRVAFVDES-GSKER-RRKRLAIMDQ----DGANVRYLT-SGEAAVVAPRYSPATQDITY-MSQTTG------QQPRVQVINLETGAR-QVIP-THAEMSTSPR-----------FSPDGRRIVMS-DQDGGNASIYVMDLASK-AQTRITNA-NAIDTSPSFSPDGREIVFESDRGGQ--QQIYVMGADGS------N-----PRRISFG----DGSASQPAWSPRGDYIAFTR--QRRG--S-----FAICIMKP----DGSG-ERVLT-EGFHNEGPTWAPNGQYVMFFRD-------------------PGGQAG-----GKLYMVDVTGRVEQPVPTP-SYASDPTWSPLL
>gi|114798605|Hyphomonas_neptunium|YP_758888.1| tolB protein [Hyphomonas neptunium ATCC 15444]  _lim(1-451(1500),451)
DE-GNFKPTPIAIPDF--QVTG-------ANTEIARQITEVVRADLASTGLFDMQNPASFIQRDLS----IN-AEPRFADWKIIRTDALVVGAFE-ELPDGKLAVSFRLWDVY-----GGE---------------------LMRINGEPGRRLTTTPEN-WRRIAHKIADSIYTRLTGEDPYFDTRIVYIAET-GPKTE-RVKRLAIMDS----DGANQQYLT-SGRSTVLTPRFSPSSQEITY-MSFEGG-------RPRVYLFNIETGRQ-ELLG-NFPGMTFAPR-----------FGTDGQSVLLS-QAQRGNTDVYIMNLRTR-ESRRLTDH-PAIDTSPSMSPDGKSVVFNSDRGGT--PQLYIMNTDGSPRACASGGRDT-ACRITFG----RGRYSTPVWSPRGDLIAFTK--QEGG--K-----FYIGVIGT----DGKG-ERLLS-ESYLDEGPDWSPNGRVIVFFRE-----------------NRPGAG-------AQLWSVDLSGRNERRVMTQ-TDASDPAWSPVL
>gi|254294750|Hirschia_baltica|YP_003060773.1| Tol-Pal system beta propeller repeat protein TolB [Hirschia baltica ATCC 49814]  _lim(1-454(1500),454)
TK-GTFEAMPMAIPDF--SGDT------TEAATVGSDIAQVIRNDLAGSGLFRMISPDAFVEKNLD----IA-VLPTFADWKVINADALLVGKTI-IDPTGSMATQFRLFDVF-----TGK---------------------QL-----YSQEYTVSSRDSWRRMAHIIADDIYEQLTPDSGYFDSRIVYIDES-GPKTK-RVRRLAIMDQ----DGANPENLT-DGRIEVQTPRFDPSSQTIIY-TALVPDARNPLLERRRVYLFDIETGRQ-EVIG-DYGLTSFAAR-----------FAPDGNSVAMS-LAEDGNSDIYILDLARR-QRTRLTNN-LAIDTSPSYSPDGKEIVFTSDRGGS--PQLYIMNADGSDRNCENGPRNK-VCRITFG----QGSYSTPVWSPRGDLIAFTK--QSKG--R-----FEIGVIKT----DGTG-ERSLT-SDYLVEGPTWSPNGRVIIFFKE------------------ARGGR-------PSLWSIDLSGRNLKRVPTR-GDASDPAWSPVL
>gi|114570966|Maricaulis_maris|YP_757646.1| TolB domain-containing protein [Maricaulis maris MCS10]  _lim(1-453(1500),453)
TQ-GNLDPMPIAVPDF--VGAS------DEALRRGADITRVVANDLASSGLFAPVDQDAFIEDIAN----ID-LRPRFSDWRVINADALLVGSVT-IQEDGRLVVGFRLWDTR-----LEE---------------------QL-----LGLQYRTAPEN-WRRVAHRLADAVYERLTGETGYFNTRIVYVSEGRGIEGE-PIRQLALMDQ----DGANPSFLT-DRSYMALLPNYSPSAQEITY-VSFLDG-------QATTYLYNLETGRQ-EALF-ASGGAGAASQVDPDGQSLSARFSPDGSELAVS-IETRSGHDIHLFDLQTR-NLQRLTQH-PADDVEPSFAPDGERIVFSSARGGG--SQLYVMNRDGS------D-----VQRITFG----SGRYTTPVWSPRGDLIAFTK--QVGG--Q-----FSLGVVRA----DGSGIERILF-EGYFVDTPAWSPNGRVLLFTRG---------------EQRANGTR-------YEIWSVDLAGFNLRRLATG-GMASDPAWSPLI
>gi|146276614|Rhodobacter_sphaeroides|YP_001166773.1| translocation protein TolB [Rhodobacter sphaeroides ATCC 17025]  _lim(1-444(1500),444)
TE-GVIEPLPFAVPNF--VAET------SGASQLAQDMARVIAADLSGTGLFREIPASAHISRVTS----FD-APIAYNDWKAINAQALITGSV--SASGDRVVVKFRLHDVF-----SDQ---------------------PL----GEGLQFAGSASG-WRRMAHKVADVAYSRITGEGGYFDSRVVFVSET-GPKNA-RAKRLAVMDY----DGANVQYLT-DSSSIVLAPRFSPTGDRILF-TSYSTG-------FPRIYLMDVGSLAT-RSLAEQPGTMTFAPR-----------FAPDGRTVAFS-LEQGGNTDIYTLDTASG-TRRQLTNS-PSIETAPSYSPDGSQIVFESDRSGG--QQLYIMPAGG-------G---E-PRRISNG----AGRYGTPVWSPRGDLIAFTK--QHQG--R-----FHIGVMRT----DGSE-ERLLT-ASFLDEGPTWAPNGRVLMFTRE----------------GAGAGGQ-------PALYSVDISGRNLKKVPLS-VPASDPAWSPLL
>gi|87199039|Novosphingobium_aromaticivorans|YP_496296.1| translocation protein TolB [Novosphingobium aromaticivorans DSM 12444]  _lim(1-461(1500),461)
SDESEWQDLGIAIPSFPTNASVPTAAEGGTTEALGRNVARVVFNDLKNNGLFKPVGPDALPAIAFP----QV-AAPAFDAWRGRSAEMLVQGFVK-ANEDGRLTVGCYLYDVA-----LGS---------------------EL-----ARQGYVVKPEE-WRRAAHKCADMVYSRLSGESPFFDSKIAYIAET-GPKDR-RRKQLAIMDS----DGANHRFIT-NGQATALTPRYSPDYSQIVY-LSYLNG-------APRIYIYNIGTGQQ-KLVT-SSTNPTFAPR-----------WSPDGKWILYS-MSVAGNTDIYRVSVNGG-ASTRLTDS-PGIDVGGSYSPDGSRIVFESDRSGS--QQLYVMNADGS------N-----QKRISFF----GGRAATPEWSPRGDQIAFTH--L-GG--N-----FRIAVTDP----SGGN-MRFLT-DSWQDEAPTWSPNGRIVQFFRT-------------------ERGSGK-----TGIWQVDLTGRNERKLNTP-VDGSDPAWGPVL
>gi|56551061|Zymomonas_mobilis|YP_161900.1| translocation protein TolB [Zymomonas mobilis subsp. mobilis ZM4]  _lim(1-458(1500),458)
TG-GISQPMPIAVPVM--PTPSSVETLAGTTAVLGRQVASVISNDLKSSGLFTPSQQASLHNVSFP----EV-TAPQYSYWLSSGAQALVQGFVQ-ANGDGTLTVGCYLYDVF-----ASQ---------------------EM-----LHKGFVVKPAD-WRRAAHKCADAVYTRLTGEGPYFDSRIVYISET-GPKNH-RLKRLAIMDQ----DGANHRFLT-NGQSMVLTPRFAPNQQTVTY-LSYVGN-------SPRIYVYTLGSGHV-RLVV-NKPNTTFAPR-----------FSPDGKTIVFS-MSVAGNTDIYKVPVSGG-QATRLTTS-PGIDTAPSFSPDGSKIVFESDRSGS--QQIYIMNADGS------N-----QNRISFG----SGRYATPVWSPRGDLIAFTK--LGGG--------FHVGVMKT----DGSG-EQILT-NGWQDEGPSWSPNGRVIAFFRT-----------------ARNSGH-------TELWSVDLTGVNERHIPTP-LDGSDPSWGPLL
>gi|157803974|Rickettsia_canadensis|YP_001492523.1| translocation protein TolB [Rickettsia canadensis str. McKiel]  _lim(1-444(1500),444)
EC-GRADPTPIAVNKF--DADT------STNNIVGHDVVKVISNDLKLSGLFHPISSASFIEDKTG----IE-DKPLFAAWRQINASLLVNGEVK-KLESGKLKISFILWDTL-----LEK---------------------QL-----VGEILEVPENL-WRRAAHKIADKIYEKITGDAGYFDTKIVYVSES--SSLP-KIKRIALMDY----DGANNKYLT-NGTSLVLTPRFARSVDKIFY-VSYATK------RRALIYEKDLKTGKE-SIVS-DFAGISFAPR-----------FSPDGRKAVMS-IAKNGSTHIYEIDLATK-QLHKLTDG-FGINTSPSYSPDGKKIVYNSDRNGV--PQLYIMNSDGS------N-----VKRISFG----GGSYAAPSWSPRGDYIAFTK--ITRG--EDGSKTFNIGIMKAYPQDDENS-ERIIT-SGYLVESPCWSPNGRVIMFAKG-------------WPSRAKVPGK-------NKIFAIDLTGHNEREIITP-EDASDPEWSMVL
>gi|157825542|Rickettsia_akari|YP_001493262.1| translocation protein TolB [Rickettsia akari str. Hartford]  _lim(1-444(1500),444)
EH-GQAAPTPIAVNKF--NIDS------SADYVLGNDVVKVISNDLKLSGVFCPISSASFIEERTG----IE-YKPLFAAWRQINASLLVNGEIK-KLESGKLKISFILWDTL-----LEK---------------------QL-----AGEILEVPENL-WRRAAHKIADKIYEKITGDAGYFDTKIVYVSES--TSLP-KIKRIALMDY----DGANNKYLT-NGRSLVLTPRFARSADKIFY-VSYATK------RRALVYEKDLKTGKE-SVVG-DFSGISFAPR-----------FSPDGRKAVMS-IAKNGSTHIYEIDLATK-RLHKLTDG-FGINTSPSYSPDGKKIVYNSDRNGV--PQLYIMNSDGS------D-----VQRISFG----GGSYTAPSWSPRGDYIAFTK--IIRG--AEG-KTFNIGIMKAYPQDDENR-ERIIT-SGYLVESPCWSPNGRVIMFAKG-------------WPSGAKAPGK-------NKIFAIDLTGHNEREIITP-EDASDPEWSGVL
>gi|15604171|Rickettsia_prowazekii|NP_220686.1| translocation protein TolB [Rickettsia prowazekii str. Madrid E]  _lim(1-443(1500),443)
EH-GRVDPTPIAVNKF--NADS------SNNDLVGRDVVKVISNDLKISGLFRPISSASFIEEQTG----IK-YKPLFAAWRQINASLLVNGEVK-TLENGKLKISFILWDTF-----LEK---------------------QL-----TGALFEVPTKL-WRRAAHKIADKIYEKITGDPGYFDTKIVYVSES--TVLP-KIKRIALMDY----DGANNKYLT-NGKSLVLTPRFAHSADKIFY-VSYATK------SRALVYEKDLKTGKE-SVVG-DFVGISFAPR-----------FSPDGKKAVMS-IAKNGSTHIYEIDLATK-QLNKLTNG-FGINTSPSYSPDGKKIVFNSDKNGV--PQLYIMNSDGS------D-----VQRISFG----VGSYASPSWSPRGDYIAFTKIIRQDGEKT-----FNIGIMKAYPQDHGNS-ERIIT-SGYLVDSPCWSPNGRVIMFSKG-------------WPSKANAPGK-------NKIFTIDLTGHNEREIITP-ADASDPEWSGIL
>gi|51473498|Rickettsia_typhi|YP_067255.1| translocation protein TolB [Rickettsia typhi str. Wilmington]  _lim(1-443(1500),443)
EH-GRVDPTPIAVNKF--NADS------SNNDLVGNAVVKVISNDLKISGLFRPISSASFIEEQTG----IN-YKPLFAAWRQINASLLVNGEVQ-TLESGKLKISFILWDTF-----LEK---------------------QL-----IGALFEVPTKL-WRRAAHKIADKIYEKITGDPGYFDTKIVYVSES--TALP-KIKRIALMDY----DGANNKYLT-NGKSLVLTPRFAHSADKIFY-VSYATK------SRALVYEKDLKTGKE-SVVG-DFVGISFAPR-----------FSPDGKKAVMS-IAKNGSTHIYEIDLATK-QLNKLTDG-FGINTSPSYSPDGKKIVYNSDKNGV--PQLYIMNSDGS------D-----VRRISFG----GGSYASPSWSPRGDYIAFTKITRHDGEKI-----FNIGIMKAYPQDHENS-ERIIT-SGYLVESPCWSPNGRVIMFSKG-------------WPSRAKAPGK-------NKIFTIDLTGHNEREVITPAG-ASDPEWSDVL
>gi|58040119|Gluconobacter_oxydans|YP_192083.1| translocation protein TolB [Gluconobacter oxydans 621H]  _lim(1-453(1500),453)
DQ-ARQEPIPIVVPNF--------------GAGLGEQISGVITSDLNGTGLFKVMSGSVPPG-----------STPDFSALKAQGARAAVAGQ---AVGAGSVRVEMRLWDVL-----SGQ---------------------QL-----QGTAYTASNSN-WRRIAHIIADVIYERMLGEKGYFDTRIAYIART-GPRHH-QITRLALMDQ----DGANERMLT-GGEWLTLTPRFNPVRDQIAF-MSYANN-------RPRVYLFDLASGRQ-QILG-EFAGISFAPR-----------FSPTGGSVVLS-ATRGGGSDIFVVDLASR-AKRQITNSNGAIDTSPCFSPDGSQIVFNSDRGGS--PQLYIMSASG-------G---A-AKRISYG----SGQYGSPVWSPRGDLIAFTR--IGSG--G-----FSLGVMNP----DGTG-ERILT-QGFTVDGATFCPNGRVLAFCRQ-------------------SASGAGGAGFASGIGTIDITGFNERPIRISTG-ASDPAWSPRN
>gi|258543663|Acetobacter_pasteurianus|YP_003189096.1| secretion system type I outer membrane protein TolB [Acetobacter pasteurianus IFO 3283-01]  _lim(1-454(1500),454)
DQ-ARTAPIPIIIPNF--------------GGGLGEKIAEVLTNDLNNTGLFKVMPGSTTS------------GTPDFVTSKSMGAHAQVTGSV--SGGGSSVRVEMRLWDVL-----SHQ---------------------QI-----QGTAYTTSAAN-WRRIAHIVGDVIYERMLGEKGYFDTRIAFISRS-GPRGH-QRTRLAVMDQ----DGANARMLT-TGKWLTLTPRFSPVKDQIAF-MSYANN-------RPRVYLFDLTSGRQ-QILG-EFEGISFAPR-----------FSPDGRSVVLS-VTRNGGSDLYIVDLASG-SRRQITSS-GAIDTSPCFSPDGSQIVFNSDRGGS--PQIYIMPASGG------G-----ARRISYG----QGTYGSPVWSPRGDLIAFTR--IAGG--M-----FSLGVMAP----DGTG-ERIMT-QGFTVESPSFCPNGRVLAYCRQ-------------------SRAGAGGAGFNSTIGMVDITGFNDRVLPTP-EAASDPAWSPLN
>gi|148261881|Acidiphilium_cryptum|YP_001236008.1| TolB domain-containing protein [Acidiphilium cryptum JF-5]  _lim(1-469(1500),469)
SG-AHNAPIPIALPAF--TDAS------GNTSDIGAQITQVVTSDLDHCGLFSAIDPTSFVPN-SV----VN-SVPVWNNWSILGAQALVTGQVT-SPGAGQIRVEYRLWGIS-----QQK---------------------QL-----QGTAYTTASGN-WRRIAHIIADDIYQQMIGEKGYFDTRVAFISVS-GPPTS-PIRRMALMDY----DGANVRFLT-SGRNMALSPQFNPTRQQLAF-VSFENN-------RPQVYLFDLQTGAR-TNIG-SFGDMSFGPR-----------FSPDGSALLFS-ISKGGGAMIVKYDLGSR-RMTQLTDA-NSINVTPCYSPDGTKIVFNSDRDGSGDQQLFVMNADGS------N-----VQRISYG----HARYAEPDWSPRGDAIAFTR--LDSS--G-----FGIGVMKP----DGSG-ERLLS-QGYLEEGATFCPNGRVIMFYRQ-------------------SPLRVGNV---SHLVTIGVDGFNERITPTP-TNAEDPSWGPRL
>gi|148284009|Orientia_tsutsugamushi|YP_001248099.1| protein precursor [Orientia tsutsugamushi str. Boryong]  _lim(1-453(1500),453)
TK-GNCTQIPIAINFF--SAKS------NEEHDLSQNIVSIISNDLNISKIFAPISSDLFIETEQG----VA-HIPLFTAWSQINANILINGEIT-KIDSTDFKVTFVIWDVF-----SAK---------------------EI-----TRKSFTFPSQL-WRSTAHKIADQIYKHVTGSKGNFNTKIVYVSES-NSSNR-KIRRIAIMDQ----DGANHNYIT-NGKNHVITPVFSPKNNQILY-VSYHNK-------IPTVRIHDLNSGNN-KILA-SFNGITFSPR-----------FSPDGNKILVSNSSTKNVTHIYEINLLTG-KIKQLTKG-QSINTSPSYSPDGSKIAFVSDRSGS--TQIYIMNDQG-------G---N-IKRLTSQ----PGAYTTPAWSPTNNYIAFTK--IEAG--E-----FSIGVIKL----DGSN-KRIIA-TKYLVEGPSWAPDGKTIIFSRA-------------YKATKSTSTK-------VKLYSVDYTGYNEREIQTP-ENASDPNWSNEY
>gi|58698639|Wolbachia_sp.|ZP_00373533.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila ananassae]  _lim(1-420(1500),420)
KK-SSVGNIGLVVSKC--TCKT------ALESELSENIAKVIGTNLSNCGLFNVKRG----------------AEAESKSWK---SDTVVTVSLS-EISGSALELSFRLFDTF-----TKR---------------------EL-----LTQSVVFPAKD-WRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYK-SVRKIAVMNQ----DGSNIKYLT-NGDRFVSTPRFSPNGKGIVY-ISYANG-------KSYIILKNLKDNTE-SIIS-TFEGVVSAPR-----------FSPDGKSLLIS-HSLGGETNILSLDLSSK-RTKKITKG-SAISTSPSFSPDQKYMAFSSDISGS--QQLYVIDFTNK------S---KKPKRISFG----SGRYATPVWSPKGDLIAFTK--IQSG--K-----FYIGVMKP----DGKE-ERLLS-EGHKIESPAWLPNGREIIFTRT------------------ESPSN-------SKLYLVDLVKKNQKMVSTP-TNASLPDWSY--
>gi|190570675|Wolbachia_endosymbiont|YP_001975033.1| Protein tolB precursor [Wolbachia endosymbiont of Culex quinquefasciatus Pel]  _lim(1-418(1500),418)
KK-SNIGNIDLVVSKC--ACKT------EVENELSESITKVIETNLSNCGLFNVK------------------RDAKVESWKS---DTVVTISLS-EVSNRNLELSFRLSDSF-----TNR---------------------EL-----LTQSVVFLAKD-WRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSNYK-SVRKIAVMNQ----DGSNIKYLT-NGEKFVSTPRFSPNGKGIVY-ISYTNG-------KSYIILKNLKDNTE-SIIS-AFEGVISAPR-----------FSPDGKSLFIS-HSLSGETNILSLDLSSK-RTKKITKG-SAISTSPSLSPDQKYMVFSSDISGS--QQLYIIDFTKK------S---KKPKRISFG----NGRYATPVWSPKGDLIAFTK--IQSG--K-----FYIGVMKP----DGKE-ERLLS-EGHKIESPAWLPNGREIIFTNA------------------ESPSN-------SKLYLVDLVKKNQKMVFTP-TNASLPDWSY--
>gi|148653367|Psychrobacter_sp.|YP_001280460.1| WD40 domain-containing protein [Psychrobacter sp. PRwf-1]  _lim(1-449(1500),449)
TKKGETNQNQVAFVPF----------------AGDSTVSSLIENNLQATPL--KITSQGLIGQPHS----RDDLAVTLPAWQQLGIPYLVIGSS--KQQGGNTSITFEVIEVA-----QGR---------------------II-----KGTQMVQGVDK--KAAANKAAGRIYELLTGKQIDLNARLVYVEEKGSGKS--KTSSLILSDA----DGSNKRLLAQVIDAAIYSPAISPDGRFVAYSVQLKDN-------SANLWKQDLQTRQL-TRLV-DMKGSNLSPS-----------FSPDGSKILFS-STVNGDSDIYRVSSQGG-KAEQIISL-PYDQLSPSYASNGS-FVFVSDHASPNRPNIYRYSFSG-------S-----PVQISR-----GGYAANPSISPEGTKIGYLS--GRSA-----------AIMSS----NGSN-VANYG-ATGIDAAPKFSPTGERVVYSQG-------------------TKN--------SNLVIRYVDGGKTITLPTE-GVAKFPVWVPSA