>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/1z5y/complex.1 A 149|PDB|input
LESALIGKPVPKFRLESLDN-------PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSA-QGIRVVGMNYKDDRQK--------------------AISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYSKEAA
>gi|157144854|Citrobacter_koseri|YP_001452173.1| hypothetical protein CKO_00582 [Citrobacter koseri ATCC BAA-895]  _lim(1-185(1500),185)
LESALIGKPVPTFRLESLEN-------PGQHYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSA-QGIRVVGLNYKDDRQK--------------------AITWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGKGIIRYRHAGDLNARVWESEIKPLWEQYSKEAA
>gi|224583265|Salmonella_enterica|YP_002637063.1| heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594]  _lim(1-185(1500),185)
LESALTGKPVPAFRLESLET-------PGQYYQAEVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSA-QGIRVVGLNYKDDRAK--------------------AVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNARVWESELKPLWDRYSREAA
>gi|253688795|Pectobacterium_carotovorum|YP_003017985.1| periplasmic protein thiol/disulphide oxidoreductase DsbE [Pectobacterium carotovorum subsp. carotovorum PC1]  _lim(1-185(1500),185)
LESALIGKPIPEFRLESLDQ-------PGKIYNQSELSDGKPLLLNVWATWCPTCRAEHQFLNTLAA-QGIRVVGMNYKDERPK--------------------AVEWLKTLGNPYAMSLFDGDGMLGLDLGVYGAPETFLIDGKGIIRYRHAGDLNMQVWQETLQPLWEKYSKEGG
>gi|108812368|Yersinia_pestis|YP_648135.1| thiol:disulfide interchange protein DsbE [Yersinia pestis Nepal516]  _lim(1-239(1500),239)
LESALIGKPVPAFKLESLEQ-------PGKTFDQAVLRDGKPILLNVWATWCPTCRAEHEYLNKLAA-QGIRVVGLNYKDDRSK--------------------AVQWLNSLGNPYFLSLYDGDGMLGLDLGVYGAPETFLIDGQGVIRYRHAGDLNDRVWQQEILPLYKKYQGAHE
>gi|123441605|Yersinia_enterocolitica|YP_001005590.1| thiol:disulfide interchange protein DsbE [Yersinia enterocolitica subsp. enterocolitica 8081]  _lim(1-188(1500),188)
LESALIGKPVPAFKLESLEQ-------PGKTFDQAVLHDGKPMLLNVWATWCPTCRAEHEYLNKLAA-QGIRVVGLNYKDDRAK--------------------AVQWLNSLGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGQGIIRYRHAGDLNDRVWQQEILPLYKKYQGG--
>gi|157371622|Serratia_proteamaculans|YP_001479611.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Serratia proteamaculans 568]  _lim(1-183(1500),183)
LESALIGKPVPAFKLESLES-------PGKTYDQAVLRNGKPMLLNVWATWCPTCRAEHQYLNTLAA-RGIRVVGLNYKDDRSK--------------------AVTWLNSLGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGQGIIRYRHAGDMNERVWQQEVLPLYKKYGGE--
>gi|238920651|Edwardsiella_ictaluri|YP_002934166.1| hypothetical protein NT01EI_2763 [Edwardsiella ictaluri 93-146]  _lim(1-184(1500),184)
LESALIGKPVPEFRLASLDT-------PGKTYSQSVLRDGKPLLLNVWATWCPTCYAEHQYLNTLAA-RGVRVVGLNYKDDRQK--------------------AIKWLNELGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIVRYRHAGDLNERIWKEEIEPLWLKYQGGQ-
>gi|206580156|Klebsiella_pneumoniae|YP_002238094.1| thiol:disulfide interchange protein DsbE [Klebsiella pneumoniae 342]  _lim(1-184(1500),184)
LESALIGKPLPEFRLEALNT-------PGQTLDRRTLIDGKPLLLNVWATWCPTCRAEHQFLNGLAQ-QGVRVVGMNYKDDRQK--------------------AMSWLQRLGNPYMLSLYDGNGMLGLDLGVYGAPETFLIDGQGIIRWRHAGDLNERVWREELQPLWDQYNRRA-
>gi|85059612|Sodalis_glossinidius|YP_455314.1| thiol:disulfide interchange protein DsbE [Sodalis glossinidius str. 'morsitans']  _lim(1-151(1500),151)
LESALIGKPLPSLTLASLDD-------PGKIYSQALLRDAHPWLLNVWATWCPTCRAEHQFLNGLAA-WGVRIAGVNYKDSRAK--------------------TMAWLNTLGNSYALSIFDGDGMLGLDLGVYGAPETFLID----------------------------------
>gi|156933065|Cronobacter_sakazakii|YP_001436981.1| hypothetical protein ESA_00875 [Cronobacter sakazakii ATCC BAA-894]  _lim(1-185(1500),185)
LESTLVGKPLPAFRLAALDD-------PNVTYDRAALLNGKPLLLNVWATWCPTCRAEHQFLNGLAA-KGVRIVGLNYKDDRAK--------------------AVAWLNTLGNPYALSLFDGSGMLGLDLGVYGAPETFVIDGRGVIRYRHAGDLNDEVWRQDVKPLWDALNQEVE
>gi|28898991|Vibrio_parahaemolyticus|NP_798596.1| thiol:disulfide interchange protein DsbE [Vibrio parahaemolyticus RIMD 2210633]  _lim(1-184(1500),184)
LESVLVGKPVPKFHLEDLAE-------PGKQYDQSIFK-GEPLLLNVWATWCPTCYAEHKYLNELAG-KGVKIIGMNYKDDRNK--------------------AIGWLNDLGNPYLISLFDGSGMLGLDLGVYGAPETFIIDANGVIRYRHVGDVNPRNWADTLAPMYNQLVEEAK
>gi|156975398|Vibrio_harveyi|YP_001446305.1| protein disulfide-isomerase [Vibrio harveyi ATCC BAA-1116]  _lim(1-184(1500),184)
LESVLVGKPVPEFHLEDLAE-------PGKQYDQSIFK-GEPLLLNVWATWCPTCYAEHKYLNELAG-KGVKIIGMNYKDDRNK--------------------AVGWLNGLGNPYLISLFDGSGMLGLDLGVYGAPETFIIDANGLIRYRHVGDVNPRNWAEKLEPLYTKLVEEAK
>gi|326423912|Vibrio_vulnificus|NP_760840.2| cytochrome c-type biogenesis protein CcmG/DsbE [Vibrio vulnificus CMCP6]  _lim(1-184(1500),184)
LESVLVGKPVPTFKLEDLAE-------PGKLYDQSVFK-GEPLLLNVWATWCPTCYAEHQYLNELAG-KGVKIIGMNYKDDRTK--------------------AVGWLNDLGNPYLISLFDGNGMLGLDLGVYGAPETFIIDANGVIRYRHVGDVNPRNWAETLEPLYNKLVEEAK
>gi|15642051|Vibrio_cholerae|NP_231683.1| thiol:disulfide interchange protein DsbE [Vibrio cholerae O1 biovar El Tor str. N16961]  _lim(1-184(1500),184)
LESVLVGKTVPEFRLEDLAE-------PGKLYDQSIFK-GEPLLLNVWATWCPTCYAEHQYLNELAK-QGVKIIGLNYKDQRDK--------------------ATQWLNDLGNPYLISLFDGNGMLGLDLGVYGAPETFLIDANGVIRYRHVGDVNSRNWQETLAPLYEKMLAEAK
>gi|86146104|Vibrio_splendidus|ZP_01064430.1| thiol:disulfide interchange protein DsbE [Vibrio sp. MED222]  _lim(1-183(1500),183)
LESVLIGKPVPEFGLEDLEQ-------PGKFHDQAIFK-GEPLLLNVWATWCPTCYAEHSYLNKLAG-QGVKIIGLNYKDDRNK--------------------AVGWLKELGNPYLISLFDGNGMLGLDLGVYGAPETFLIDANGVVRYRHVGDVNPTNWASTLEPMYQELLEEA-
>gi|209695707|Aliivibrio_salmonicida|YP_002263637.1| thiol:disulfide interchange protein DsbE (cytochrome c biogenesis protein CcmG) [Aliivibrio salmonicida LFI1238]  _lim(1-182(1500),182)
LESVLVGKPVPEFRLEDLAE-------KGKLYDQSIFR-GEPLLLNVWAKWCPTCYAEHQYLNTLAT-EGVKIIGMNYKDERAG--------------------TVKWLKELGNPYLITLFDGDGMLGMDLGVYGAPETFLIDRNGIVRYRHVGDVNDRNWNEKLKPMYDQLVAES-
>gi|59712425|Aliivibrio_fischeri|YP_205201.1| periplasmic thioredoxin of cytochrome c-type biogenesis [Vibrio fischeri ES114]  _lim(1-183(1500),183)
LESVLVGKPVPEFRLEDLAQ-------EGKLYDQSIFK-GEPLLLNVWATWCPTCYAEHQYLNTLAT-EGVKIIGMNYKDDRAG--------------------AVQWLKELGNPYLITLFDGDGMLGMDLGVYGAPETFLIDSNGIVRYRHVGDVNERNWNETLKPMYDQLVAEA-
>gi|117620028|Aeromonas_hydrophila|YP_855938.1| thiol:disulfide interchange protein DsbE [Aeromonas hydrophila subsp. hydrophila ATCC 7966]  _lim(1-176(1500),176)
LESVMVGKEVPVFTLQDIYD-------LNKQHDRSILK-GRPMLLNVWATWCPTCYGEHTYLKQLAG-QGIYIVGMNYKDERAK--------------------AINWLAELGNPYQINLYDPDGMLGLDLGVYGAPETFFIDSQGIIRYRHVGDVNPEVWASTLKPIYDAM-----
>gi|145298380|Aeromonas_salmonicida|YP_001141221.1| thiol:disulfide interchange protein DsbE [Aeromonas salmonicida subsp. salmonicida A449]  _lim(1-176(1500),176)
LESVMVDKEVPVFTLQDIYD-------LNKQHDRSILK-GRPMLLNVWATWCPTCYGEHTYLKQLAE-QGIPIVGMNYKDERDK--------------------AIRWLTELGNPYQVNLYDPDGMLGLDLGVYGAPETFFIDSQGIIRYRHVGDVNPQVWATTLKPIFESM-----
>gi|219871384|Haemophilus_parasuis|YP_002475759.1| thiol-disulfide interchange protein [Haemophilus parasuis SH0165]  _lim(1-179(1500),179)
LESALVGKTIPEFKLESLHE-------ATQMLDSSVVKTGTPRLLNVWATWCPTCFAEHQFLTVLAK-QGVEIVGIDYKDERAK--------------------ALKFLKDYGDPYKTIVYDPKGSLGLDLGVYGAPETFIIDGNGKIHYRHTGDVNEKVWNEVLKPMYEKL-----
>gi|126208978|Actinobacillus_pleuropneumoniae|YP_001054203.1| thiol:disulfide interchange protein DsbE [Actinobacillus pleuropneumoniae L20]  _lim(1-180(1500),180)
LESALVGKTIPDFRLESLLD-------EKQMLDQNVLKTGTPRLLTVWATWCPTCYAEHEYLTLLAK-QGVEIVGVDYKDERSK--------------------AMRFLASYGNPYKANIYDPKGSLGLDLGVYGAPETFIIDGNGVIHYRHAGDVNDQVWNQVLKPIYEKLK----
>gi|33151330|Haemophilus_ducreyi|NP_872683.1| thiol:disulfide interchange protein DsbE [Haemophilus ducreyi 35000HP]  _lim(1-179(1500),179)
LESALVGKTVPDFQLESVLN-------AEQQLDATLLKKGSPRLLNVWATWCPTCYAEHEYLTVLAK-QGVEIVGIDYKDERVN--------------------AMKFLAAYGNPYKAIIYDPKGALGLDLGVYGAPETFIVDGQGIIHYRYAGDINEKVWIEILKPIYEKL-----
>gi|170718890|Histophilus_somni|YP_001784062.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Haemophilus somnus 2336]  _lim(1-181(1500),181)
LESALIGKSVPNKLLTDLLT--------DKQYDNRLFKQGKPLLVNVWATWCPTCYAEHQFLNELHK-QGINIIGINYKDKTDK--------------------AIKWIKKLGNPYQVIVKDEKGSFGLDLGVYGTPETFIVDGNGIIHYRHTGDINERIWKEKIQPIYQQVSEK--
>gi|52424662|Mannheimia_succiniciproducens|YP_087799.1| TrxA protein [Mannheimia succiniciproducens MBEL55E]  _lim(1-182(1500),182)
LESALVGKPVPEKVMQGLFD--------NKDYTSEVFKQGKPILLNVWATWCPTCYAEHQYLNELAK-QGITIIGVDYKDDSAK--------------------AVKWLKDLDNPYQLVLKDEKGSLALDLGVYGAPETFIIDGKGVIHYRLAGDVNEKVWKNTLLPIYNQLFEDG-
>gi|15601876|Pasteurella_multocida|NP_244948.1| DsbE [Pasteurella multocida subsp. multocida str. Pm70]  _lim(1-181(1500),181)
LESALIGKPVPLRTLQDLFE--------EKQYGIEIFQQGKPILLNVWATWCPTCYAEHQYLNKLAQ-QGVTIIGIDYKDKSAQ--------------------AIKWLKDLGNPYQIVLKDEKGSNGLDLGVYGAPETFVIDGQGIIHYRHAGDLNQKVWDEKIQPIYQKLVER--
>gi|120554871|Marinobacter_hydrocarbonoclasticus|YP_959222.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Marinobacter aquaeolei VT8]  _lim(1-178(1500),178)
LESVLVGKPVPEFSLEALDN-------PDVQLDPSVFQ-GEVSLLNVWAEWCPSCWDEHEYLTYLAREQGVRIVGLNYKDQREN--------------------AFRFLNRLGNPYETIIFDPKGTLGFDLGVYGAPETFVIDADGVVRYRHVGVVNQKVWDEVLLPVIAQARGN--
>gi|104782781|Pseudomonas_entomophila|YP_609279.1| thiol:disulfide interchange protein DsbE [Pseudomonas entomophila L48]  _lim(1-178(1500),178)
LPSAMIGKPFPVFSLGTVQG--------DRTLTQADLI-GRPALVNVWGTWCPSCKVEHPYLNQLAE-QGVVIHGVNYKDDNAA--------------------ALKWLAEFHNPYQLNIADPQGSLGLDLGVYGAPETFLVDAKGIIRYKHVGVVDATVWREQLAPLYQGLVDEAR
>gi|229589282|Pseudomonas_fluorescens|YP_002871401.1| cytochrome C biogenesis, thiol:disulfide interchange protein [Pseudomonas fluorescens SBW25]  _lim(1-178(1500),178)
LPSAMIGKPFPAFSLPTVQG--------DKTLTQADLL-GKPALVNVWGTWCISCRVEHPVLNTLAE-KGVVIYGINYKDDNAA--------------------ALKWLAEFHNPYQLDIRDEDGNLGLNLGVYGAPETFFIDAKGVIRDKYVGVIDEVVWREQLAAEYQALVDEAK
>gi|66046616|Pseudomonas_syringae|YP_236457.1| periplasmic protein thiol:disulfide oxidoreductase DsbE [Pseudomonas syringae pv. syringae B728a]  _lim(1-178(1500),178)
LPSALIGKPFPAFSLPAVQG--------ERMLSRADLL-GKPALVNVWGTWCVACRVEHPVLTRLAQ-QGVLIYGVNYKDVNAD--------------------ALKWLKEFHDPYQLNIRDQDGSLGLNLGVYGAPETFLIDAQGIIRYKHVGVIDDAVWREKLAARYQQLVDEAQ
>gi|146282888|Pseudomonas_stutzeri|YP_001173041.1| cytochrome C biogenesis protein CcmG [Pseudomonas stutzeri A1501]  _lim(1-171(1500),171)
LPSALIGKPLPAFSLPSVKD-------EQRLITDADLK-GKPALVNVWATWCVACKVEHPVLNRLAA-QGVVIHGVNYKDDNAA--------------------AQKWLKEFHDPYQLNIRDERGSLGLDLGVYGAPETFMVDKQGVIRHKFVGVIDDRVWREQLAALYQELVD---
>gi|15596678|Pseudomonas_aeruginosa|NP_250172.1| cytochrome C biogenesis protein CcmG [Pseudomonas aeruginosa PAO1]  _lim(1-180(1500),180)
LPSALIGKPFPAFDLPSVQD-------PARRLTEADLK-GKPALVNVWGTWCPSCRVEHPELTRLAE-QGVVIYGINYKDDNAA--------------------AIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQLLDEPE
>gi|152982365|Janthinobacterium_sp.|YP_001352630.1| Thiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG) [Janthinobacterium sp. Marseille]  _lim(1-178(1500),178)
LPSALIGKPFPVFTLPSLDD-------PSRLLTREDVK-GRPALVNVWATWCPSCRQEHPVLTKLAN-QGVIIYGVNYKDDRDA--------------------AQRWLRTLHNPYQRNIEDAAGTLGLDLGVYGAPETFFIDAQGIVRDKYVGIIDQRVWQEELAPIYEKLLREGA
>gi|110833698|Alcanivorax_borkumensis|YP_692557.1| thiol:disulfide interchange protein DsbE [Alcanivorax borkumensis SK2]  _lim(1-182(1500),182)
LPSALVGKPVPSFSLSSLLT--------EETYTEDSLK-GRWQLLNVWATWCPTCHVEHPYLLELAA-RGVAIAGLNYKDELPA--------------------ARQYLANLGNPFTHVIVDADGQLGLDLGVYGAPETFLINPAGEIVLRHAGDLNARVWEEKFLPLLPAQAGQGK
>gi|83647059|Hahella_chejuensis|YP_435494.1| cytochrome c-type biogenesis protein CcmG [Hahella chejuensis KCTC 2396]  _lim(1-187(1500),187)
LELARKDQPVPAFKLGELYN-------PDREMTPADLK-GEPMLLNVWATWCPSCRVEHPYLLKLAKEYNVPVIGLNYKDDREA--------------------AKKWLEALEDPYRFVIFDPEGRLGLDLGVYGAPETYVIDAAGVIRYRHVGVVNEKVWRETLAPMLRNLKMANA
>gi|212634865|Shewanella_piezotolerans|YP_002311390.1| thiol:disulfide interchange protein DsbE [Shewanella piezotolerans WP3]  _lim(1-184(1500),184)
LDSALEGKPIPTFELEILEK-------SGETLTNETLK-GKVSLLNVWATWCPSCKYEHPFLMTLARKDVLPIYGINYRDERAL--------------------AIRELSREGNPYAINIYDHNGRLGLDLGVYGAPESFLVDHKGIIRYRYAGPIDSRVWKETLYPMVQELQAEAA
>gi|157960048|Shewanella_pealeana|YP_001500082.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Shewanella pealeana ATCC 700345]  _lim(1-184(1500),184)
LDSALEGKPIPAFQLEVLEK-------SGETVTNETLK-GKVGLLNVWATWCPSCKYEHPFLMTLARQKILPIYGINYRDDRPL--------------------AIRELSREGNPYAINIYDHDGRLGLDLGVYGAPESFLIDHKGIIRYRYAGPIDRNVWKDTLYPMVQQLQAEAA
>gi|24371865|Shewanella_oneidensis|NP_715907.1| thiol:disulfide interchange protein DsbE [Shewanella oneidensis MR-1]  _lim(1-184(1500),184)
LDSALEGKPIPAFQLERLET-------PNEMITNEQLK-GKVALLNVWATWCPSCKYEHPFLVMLKRQNILPIYGINYRDERIP--------------------ALEELRRQGDPYNINIYDKDGRLGLDLGVYGAPESFIVDHNGIIRYRYAGPIDQRVWSETLYPMIQQLQAEAA
>gi|117918693|Shewanella_sp.|YP_867885.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Shewanella sp. ANA-3]  _lim(1-184(1500),184)
LDSALEGKPIPAFQLERLET-------PSEMITNEQLK-GKVSLLNVWATWCPSCKYEHPFLVMLKRQNILPIYGINYRDERIP--------------------ALEELKRQGDPYHTNIFDKDGRLGLDLGVYGAPESFIVDHKGIIRFRYAGPIDQRVWSETLYPMIQQLQAEAA
>gi|152998785|Shewanella_baltica|YP_001364466.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Shewanella baltica OS185]  _lim(1-184(1500),184)
LDSALEGKPIPAFQLERLET-------PAEIITNEQLK-GKVSLLNVWATWCPSCKYEHPFLVMLKRKNLLPIYGINYRDERAP--------------------ALEELKRQGDPYNVNIYDKDGRLGLDLGVYGAPESFVVDHNGIIRFRYAGPIDQRVWSETLYPMIQQLQAEAA
>gi|170728974|Shewanella_woodyi|YP_001763000.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Shewanella woodyi ATCC 51908]  _lim(1-185(1500),185)
LDSALEGKPVPAFQLERLED-------RNEIITNESLK-GEVALLNVWATWCPSCKYEHPYLMRFARQGILPIYGINYRDERPL--------------------AIRELNREGDPYTKNIFDHDGRLGLDLGVYGAPESYLIDHNGIIRYRYAGPIDQRIWSETLLPMIKELQAAAK
>gi|127511128|Shewanella_loihica|YP_001092325.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Shewanella loihica PV-4]  _lim(1-185(1500),185)
LDSALEGKPIPAFQLQKLED-------ANEIITNDSIK-GQVSLLNVWATWCPSCKYEHPYLMRLARQNILPIYGINYRDERAM--------------------AIRELSREGDPYTKNIFDHDGRLGLDLGVYGAPESYLVDHNGIIRFRYAGPIDMRVWNETLYPMIQELQAQAK
>gi|114561371|Shewanella_frigidimarina|YP_748884.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Shewanella frigidimarina NCIMB 400]  _lim(1-184(1500),184)
LDSALEGKPVPAFQLERLEV-------PSEVLTEKDLP-AKVSMLNFWATWCPACKYEHPYLMMLSKRNLLPIYGINYRDERAL--------------------AVKELTTQGDPYTVNIFDKDGRLGLDLGVYGAPETFIVDHNGIIRYRYAGPIDQTVWTQTLYPMIQQLQAEAK
>gi|91794912|Shewanella_denitrificans|YP_564563.1| periplasmic protein thiol [Shewanella denitrificans OS217]  _lim(1-184(1500),184)
LESALEGKLVPYFELEQLEQ-------SDKVITNKDLI-GKVAMLNVWGTWCPACKYEHPYLMVLARNKQIPIYGINYRDERDM--------------------ALEELKLQGNPYEINIFDKDGRLGLDLGVYGAPESFLIDHQGIVRYRFAGPIDQRIWADTLYPIVKTLQEQAV
>gi|71278582|Colwellia_psychrerythraea|YP_267785.1| thiol:disulfide interchange protein DsbE [Colwellia psychrerythraea 34H]  _lim(1-182(1500),182)
MPSALVGKTMPAFALQTLNN-------SEQMVTQADLL-GDIVLVNVWATWCPTCKYEHPYLVDIAKDPQVKLYGLNYKDERVA--------------------AQKWLQNYEDPYMFSIFDEEGTLGLDLGVYGAPETFVIDHHGIIRKRFAGAIDTRVWRREFEPLIAQLIEEKK
>gi|152997412|Marinomonas_sp.|YP_001342247.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Marinomonas sp. MWYL1]  _lim(1-169(1500),169)
MPSALVGKKVPEFTLVSLQD--------DQVYTHKDLP-DAPYLINFWGTWCPACHVEHPFLMELAN-SGVPIVGIDYKDQKDL--------------------AVQWLEQKGNPYQVILMDEIGNFGVDMGVTGAPETFVVDRSGVVVYRHQGVINAENW-----PEIKGYM----
>gi|148360492|Legionella_pneumophila|YP_001251699.1| cytochrome C biogenesis protein [Legionella pneumophila str. Corby]  _lim(1-177(1500),177)
LPSARIGKPLPDFALPELQN-------PDSTFSAINFH-NQVVLLNVWASWCEACVEEQVFMLQLAR-EGVPIYGLNYKDNPEH--------------------ARAWLSQWGNPYRLIGQDSEGKVAIDLGVYGAPETFVIDKKGIVRYRHVGIMNQKTWLTDILPLMRNLEK---
>gi|114331623|Nitrosomonas_eutropha|YP_747845.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Nitrosomonas eutropha C91]  _lim(1-174(1500),174)
VPSPLIDKPAPIFHLQQLYD-------SSKTLSSEDNL-GKVWMLNVWASWCVACRDEHPVLVELSKLGIVPIYGLNYKDQRDT--------------------AMQWLRQYGNPYETSIVDADGKVGIDYGVYGVPETYVIDKQGIIRYKHIGPVTVESLKDKILPLIKELK----
>gi|30248773|Nitrosomonas_europaea|NP_840843.1| periplasmic protein thiol:disulfide oxidoreductase DsbE [Nitrosomonas europaea ATCC 19718]  _lim(1-174(1500),174)
VPSPLVDKPAPPFRLQQLYD-------TTKTLSSEENL-GKVWMLNVWASWCVACRDEHPVLVELSKLGIVPIYGLNYKDQRDT--------------------AMQWLKQFGNPYEISIVDADGKVGINYGVYGVPETYVIDKQGIIRYKHIGPVTVESLKNKILPLIKELK----
>gi|82702337|Nitrosospira_multiformis|YP_411903.1| periplasmic protein thiol [Nitrosospira multiformis ATCC 25196]  _lim(1-174(1500),174)
VPSPLVGKPAPEFQLQQLHE-------PEKTLTSKENL-GKVWLLNVWASWCVSCRQEHPVLVELSKSGIVPVYGLNYKDQRDD--------------------ALRWLQQFGDPYAVSAVDPEGRTGIEFGVYGVPETYVIDKNGVIRYKQIGPVTVEALQNKILPLVRELQ----
>gi|53802371|Methylococcus_capsulatus|YP_112948.1| thiol:disulfide interchange protein DsbE [Methylococcus capsulatus str. Bath]  _lim(1-188(1500),188)
VPSPLIGKPAPAFSLPEVAA-------ADRTLSLEQLK-GQVFLLNVWASWCVSCRQEHPVLVDFAKRGIVPIYGLNYKDTRND--------------------ALAWLKRFGDPYRASVFDEDGKTGIDWGVYGVPETFLVDKHGVIRYKQTGPVTHEDLENKILPLIRELQGA--
>gi|194291413|Cupriavidus_taiwanensis|YP_002007320.1| periplasmic thioredoxin, cyochrome C-type biogenesis [Cupriavidus taiwanensis LMG 19424]  _lim(1-180(1500),180)
LPSPLVGRSAPAFRLPLLAP-------EGRTLDSADLR-GKVWLLNVWASWCAACRTEHPLLVDFAARAPVPLYGLNYKDEAVA--------------------ARDWLRRLGNPYTASLVDADGRVGIDYGVYGVPETFVIDQHGVVRYRQVGPVTREVLERKLIPLIEQLQRQGG
>gi|38637883|Cupriavidus_necator|NP_942857.1| cytochrome C-type biogenesis protein [Ralstonia eutropha H16]  _lim(1-180(1500),180)
LPSPLVGKPAPAFSLPLLEP-------EGRTLAAADMR-GKVWLLNVWASWCAACRTEHPVLVDFAARSHVPLYGLNYKDETGA--------------------ARDWLQRMGNPYAASLVDADGRVGIDYGVYGVPETFVIDQSGVVRYRQAGPVTREVLERKLMPLIEQLEKSGD
>gi|71909607|Dechloromonas_aromatica|YP_287194.1| periplasmic protein thiol:disulfide oxidoreductase DsbE [Dechloromonas aromatica RCB]  _lim(1-194(1500),194)
VPSPLVGKPAPAFNLNVLAT-------PDKTLGPKDMQ-GKVWLLNVWSSWCVSCRQEHPVLVEFSRKVDVPLVGLNYKEVRGDGNFDMSKMPADEEKKLAFQRANQWLAQHGNPYTLTVMDLDGRVGIDYGVYGVPETYIIDKAGIIRMKHTGPISPDVLAQKIMPLLAELN----
>gi|171058234|Leptothrix_cholodnii|YP_001790583.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Leptothrix cholodnii SP-6]  _lim(1-176(1500),176)
VPSPLIGKPAPEFALPRLDD-------GAQTIQRADLL-GQVWMLNVWASWCVACRQEHPLLVEYAKQKRLPIYGLNYKDERAD--------------------GQQWLAQFGNPYTASLYDRAGRVGIDFGVYGVPETFIIDREGVVRMKHIGPLTPEVIRERIEPLLRQLN----
>gi|124266403|Methylibium_petroleiphilum|YP_001020407.1| periplasmic protein thiol:disulfide oxidoreductase DsbE [Methylibium petroleiphilum PM1]  _lim(1-177(1500),177)
VPSPLIGKPAPAFTLARLDD-------ANQTLRRDDLL-GKVWILNVWASWCVACREEHPTLMEFARSKSVPVIGLNYKDTRPA--------------------GLEWLRRFGDPYDASAFDADGRVGIDFGVYGVPETFVIDQQGLVRLKHIGPLTPAVIETRIRPLLKALN----
>gi|237654644|Thauera_sp.|YP_002890958.1| periplasmic protein thiol/disulphide oxidoreductase DsbE [Thauera sp. MZ1T]  _lim(1-197(1500),197)
VPSPLIDKPAPNFRLARLDQ-------PEQTFALEEMR-GQVWLLNVWASWCVACRQEHPVLVRMAAQKLVPVVGLNYKEVRGDGAISTRGMALEAEATMAIERARRWLADHGNPYLLSVLDIDGRVGIDFGVYGVPETFLIDREGRIRYKHIGPITPESLQTQIMPKVEELRRA--
>gi|119900218|Azoarcus_sp.|YP_935431.1| protein disulfide-isomerase [Azoarcus sp. BH72]  _lim(1-197(1500),197)
VPSPLIDKPAPAFRLARLDQ-------PAQTFALEEMR-GQVWLLNVWASWCVACRQEHPVLVDLAKRQLAPIVGLNYKEVRGDGEIDARDMALEAETALAIERAHGWLRAHGDPYALSVLDIDGRVGIDFGVYGVPETFLIDQRGNIRYKHIGPITPESVEKIFAPRIEELKRA--
>gi|91780425|Burkholderia_xenovorans|YP_555632.1| periplasmic protein thiol-disulfide oxidoreductase DsbE [Burkholderia xenovorans LB400]  _lim(1-180(1500),180)
LPSALIGQPAPSFDLPGLGA-------TDKRVSPQVLR-GQVWILNVWASWCESCRDEHPLLVDLAARRIAPVYGMDYKDERAP--------------------ALQWLAEAGDPYTASFVDHSGQTGIDYGVYGVPETFVIDRAGIIRYRHAGPLTRQSLDGVILPLVRQLQHEDI
>gi|114320841|Alkalilimnicola_ehrlichii|YP_742524.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Alkalilimnicola ehrlichii MLHE-1]  _lim(1-175(1500),175)
IPSPLIDREAPAFHLPDLQD-------PTRTVSRDDLL-GRVTVVNVWASWCTSCRQEHPVLQQLAD-RGVHLIGLNYKDDPAA--------------------ARELLAEAGNPYARTARDGDGRAGIDWGVYATPETFVVDREGVVRHKHTGPLTAEIAREQILPLIRELEAT--
>gi|77164459|Nitrosococcus_oceani|YP_342984.1| periplasmic protein thiol-disulfide oxidoreductase DsbE [Nitrosococcus oceani ATCC 19707]  _lim(1-177(1500),177)
VPSPFIDKPAPELGVSQLRT-------PSKEIYRSDLL-GKPALINVWASWCVACRAEHEVLMRLARETRLPIIGLNYKDERGA--------------------ALQWLANLGDPYAAIAVDTDGQVGIEWGVYGVPESFLLDPEGVIRYKQIGPLTWKVVEDKLLPLIRSFETQG-
>gi|121998152|Halorhodospira_halophila|YP_001002939.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Halorhodospira halophila SL1]  _lim(1-177(1500),177)
LPSPLVGKPAPDFELESLRD-------AGVTLTRDDFI-GEIALVNVWASWCDSCRHEHTYWRQLAD-RGIPIHAFNYRDSREN--------------------AHRYLEFFGDPFREIAYDPRAEAGMEWGVYATPETYVLDAEGIIRHKHIGPVNAEVLRNDILPLIEELEAER-
>gi|170741818|Methylobacterium_sp.|YP_001770473.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Methylobacterium sp. 4-46]  _lim(1-196(1500),196)
VPSALIGRPAPAFALPGLPGLAGQDG-PVPGLASADFA-GKVTVLNVWASWCAPCQIEHPMLMRLSR-DGVNLVGIDYKDAPEN--------------------GRRFLGRHGNPFRAVGMDESGRVGIDFGVYGVPETFIIGPDGRIRDKLVGILTAENYESFLEKVRAAA-----
>gi|188581891|Methylobacterium_populi|YP_001925336.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Methylobacterium populi BJ001]  _lim(1-206(1500),206)
LPSALIGKPAPAFALGPVPGLEADGK-PVPGLSSADLK-GQVTVLNVFASWCAPCQVEHPMLMRLAQEPGIRLVGIDYKDPGDA--------------------GRRWLERHGLPFAAVGADPSGRAGIDLGVYGVPETFIIGPDGVIRDKLVGILTPENYASVLGRIRAAGRTTPV
>gi|154248050|Xanthobacter_autotrophicus|YP_001419008.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Xanthobacter autotrophicus Py2]  _lim(1-200(1500),200)
IPSALVGKAAPRIALPPLDGLNGPGGTPLPGIDLAALA-GKPTLVNVWASWCGPCRDEHPVLMQLAKDGRFNLVGINYKDAPEN--------------------ARRFLGQYGLPYQAVGVDPKGRAAIDWGVYGVPETFVVARDGTIAHKFVGPLTTEAVNTTLLPLIARLSG---
>gi|86747491|Rhodopseudomonas_palustris|YP_483987.1| periplasmic protein thiol [Rhodopseudomonas palustris HaA2]  _lim(1-197(1500),197)
IPSALIGREVPQTELPALDALTRDGA-AVPGLGPAQFK-GKVSVVNVWASWCVPCHDEAPLLTALGDDKRFQIVGINYKDRPDN--------------------ARRFLGRYGNPFAAVGVDASGRAAIEWGVYGVPETFVVGRDGKIAYKLVGPITPDNLDKVLKPEIEKALGK--
>gi|153007455|Ochrobactrum_anthropi|YP_001368670.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Ochrobactrum anthropi ATCC 49188]  _lim(1-193(1500),193)
IPSALIGKQAPQTNLPPVEGLVRDGV-PVPGLNSEEFK-GKLTLVNVWGSWCVPCRQEHPLLMEIAKDERIRVVGLNYKDQPEN--------------------ARRFLGDLGNPFAAVGADRAGRSAIEWGVYGVPETFLVGPDGKIVYKHVGPFTPESVKNDLMPLI--------
>gi|148244748|Calyptogena_okutanii|YP_001219442.1| thiol:disulfide interchange protein DsbE [Candidatus Vesicomyosocius okutanii HA]  _lim(1-176(1500),176)
LPSPLLGRAFPNLQVEDFNS-------AKIYAIQDKLQ-GKISLVNVWASWCVTCRVEHEILMKIAKTNSLQILGINYKDTRKD--------------------GNIFLTRLGNPYDSIVFDQLGKLGLELGVYATPETFITDQQGIIRFKRIGELTPRIWESKISPLIDELRNSM-
>gi|109899555|Pseudoalteromonas_atlantica|YP_662810.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Pseudoalteromonas atlantica T6c]  _lim(1-190(1500),190)
HESTLLNKPVPSFVLPDLMD-------TDLTYTTEVFV-GKVTLLNVWGVWCVTCAVEIPFLEQLKN-EGKHIVGLYYDQDIDPDFGIKTVERVQQE-------VEQKLGQLGDPYAYNIFDVKRDLSLDLGVTGAPETFLIDKQGKVRLHHIGDINPRVWQNKFESVYQELIA---
>gi|196157867|Alteromonas_macleodii|YP_002127356.1| thiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG) [Alteromonas macleodii 'Deep ecotype']  _lim(1-219(1500),219)
LDSQVKDKTLPAFSLPDLMQ-------PDVTYTPEDLK-GQVTILNVWGVWCVTCAVEMPYLTQLKNEQDVHIVGLYFDQDLDPDFGTKTLSRVQQE-------VTEMLSRYGNPYAYNIFDVYRDTSLDLGVTGAPEHFVIDANGVIRMHHIGDINERVWNTKVGPLYNKLVAQAA
>gi|21243064|Xanthomonas_axonopodis|NP_642646.1| C-type cytochrome biogenesis protein/thioredoxin [Xanthomonas axonopodis pv. citri str. 306]  _lim(1-200(1500),200)
LPSALIGKPAPEFALPLLHD-------PAIVVHARELR-GAPYIINVWGSWCPACREEHPVLSRFALTKRVRVIGYNWKDERND--------------------ALRWLEQLGNPYLLVVADQDGRTAIDFGIAAAPETFLVDGRGVVRWKYSGMLTQSIIDTQLIPALSQIERSPT
>gi|78048084|Xanthomonas_euvesicatoria|YP_364259.1| thiol:disulfide interchange protein (c-type cytochrome biogenesis protein CcmG) [Xanthomonas campestris pv. vesicatoria str. 85-10]  _lim(1-200(1500),200)
LPSALIGKPAPEFALPLLHD-------PAIVVHARELR-GAPYIINVWGSWCPACREEHPVLSRFALTKRVRVIGYNWKDERND--------------------ALRWLEQLGNPYLLVVADQDGRTAIDFGIAAAPETFLVDGRGVVRWKYSGMLTQSIIDTQLIPALSKIERSPT
>gi|58581772|Xanthomonas_oryzae|YP_200788.1| C-type cytochrome biogenesis protein/thioredoxin [Xanthomonas oryzae pv. oryzae KACC10331]  _lim(1-200(1500),200)
LPSALIGKPAPEFALPLLHD-------PSIVVHARELR-GAPYIINVWGSWCPACREEHPVLSRFALTKRVRVIGYNWKDERND--------------------ALRWLEQLGNPYLLVVADQDGRTAIDFGIAAAPETFLIDGRGVVRWKYSGMLTQSIIDTQLIPALSKIERSPT
>gi|21231664|Xanthomonas_campestris|NP_637581.1| c-type cytochrome biogenesis protein/thioredoxin dsbE or [Xanthomonas campestris pv. campestris str. ATCC 33913]  _lim(1-200(1500),200)
LPSALIGKPAPEFALPLLHD-------PSIIVHARELR-GAPYIINVWGSWCPACREEHPVLSRFALTKRVRVIGYNWKDERAD--------------------ALRWLEQLGNPYLLVVADTDGRTAIDFGIAAAPETFLVDGRGVVRWKYSGMLTQSIIDTQLIPALTRIERSPS
>gi|148652612|Psychrobacter_sp.|YP_001279705.1| periplasmic protein thiol--disulfide oxidoreductase DsbE [Psychrobacter sp. PRwf-1]  _lim(1-206(1500),206)
VIDNALNRPVPTFDLPLLSD-------PSKNVTNADLP-KTPFLINVWGSWCPTCIVEHPYLMQLHE-QGVPIVGVNYKDELEN--------------------ANGYLADGGDPFLFSFRDYSGSFAIDLGLTGAPETFVVDSENNIRQHIIGEVAEENWKARIEPCVSLLNKLGE