>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/1yvb/complex.1 B 108|PDB|input
GAPVPVDENDEG--LQRALQFAMAEYNRAS--NDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDL--QSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ
>gi|162459564|Zea_mays|NP_001106013.1| cystatin2 [Zea mays]  _lim(1-134(1500),134)
GGIQDVPENENDLHLQELARFAVDEHNKKA--NALLGF--EKLVKAKTQVVAGTMYYLTIEVKDGEVKK----------------------LYEAKVWEKPWEKFKELQEFKPV
>gi|79596870|Arabidopsis_thaliana|NP_850570.2| cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana]  _lim(1-234(1500),234)
GGVGDVPANQNSGEVESLARFAVDEHNKKE--NALLEF--ARVVKAKEQVVAGTLHHLTLEILEAGQKK----------------------LYEAKVWVKPWLNFKELQEFKPA
>gi|297826717|Arabidopsis_lyrata|XP_002881241.1| hypothetical protein ARALYDRAFT_902339 [Arabidopsis lyrata subsp. lyrata]  _lim(1-119(1500),119)
GSWSPISDVKDP-HIVKIGEFAVSEYNKQS--KSGLKF--VTVVRGESQIVSGVNYRLVVVSNDGTDPS---------------------KNYEAIVLEKPWLKSMNLTSFKPA
>gi|224057220|Populus_trichocarpa|XP_002299179.1| predicted protein [Populus trichocarpa]  _lim(1-200(1500),200)
GGVHDSEASQNSVEIENLARFAVDEHNKKE--NAILEF--ARVVKAKEQVVAGTMHHLTIEAIEAGKKK----------------------IYEAEVWVKPWLNFMELKEFKHA
>gi|255570486|Ricinus_communis|XP_002526201.1| cysteine protease inhibitor, putative [Ricinus communis]  _lim(1-208(1500),208)
GGSHDSKGFENTGEIENLARFAVQEHNKKQ--NDVLEF--VRVLKSKEQVVAGKLYYLTLEAIEAGHKK----------------------LYEVKVWVKPWMNFKQLKEFKYA
>gi|308500298|Caenorhabditis_remanei|XP_003112334.1| CRE-CPI-2 protein [Caenorhabditis remanei]  _lim(1-143(1500),143)
GGFKDQDASAPE--YHAHAWKAVKGINDQASNNGPYYFVPIKVIKAQTQVVAGVNTKLEVLVGESSCKKGEMQVHELTASNCQAKDGGNRAIYQVSVWEKPWENFEQFTVEKVR
>gi|17562818|Caenorhabditis_elegans|NP_504565.1| Cysteine Protease Inhibitor family member (cpi-2) [Caenorhabditis elegans]  _lim(1-143(1500),143)
GGSVEQDASQKE--YSDKAWKAVKGINDQASNNGPYYYAPIKVTKASTQVVAGISTKLEVLVGESNCKKGELQAHEITSSNCQIKDGGSRALYQVTIWEKPWENFEQFTVEKIR
>gi|268557654|Caenorhabditis_briggsae|XP_002636817.1| C. briggsae CBR-CPI-2 protein [Caenorhabditis briggsae]  _lim(1-144(1500),144)
GGFTEQDASKKE--YHEQAWKAVKGINDQASNNGPYYYVPIKVTKAQTQVVAGLNTKLEVLVGESSCKKGDMQPHELTSSNCNVKDGGSRAIYQVTIWEKPWENFEQFTVEKVR
>gi|149544362|Ornithorhynchus_anatinus|XP_001518631.1| PREDICTED: similar to vap1, partial [Ornithorhynchus anatinus] _lim(1-78(1500),78)
------------------------------------HSYAVQLLQEEKEIVAGVKYYLDVEIGRTTCTKSVSDL--ASCPFHDRPELKKQTFCSFEVLSVPWLSKTKLLKNNCK
>gi|126304281|Monodelphis_domestica|XP_001382093.1| PREDICTED: hypothetical protein [Monodelphis domestica] _lim(1-141(1500),141)
GGITEANENEEG--VQRAVNFAISEYNKAS--NDKFGHRIVRVVRAQKQLVAGIKYILEVEISRTTCTKSVTDF--SSCPLHEDPTLKKHSICNFVVYFVPWLGKISLIKNECK
>gi|148228609|Xenopus_laevis|NP_001089082.1| cystatin C [Xenopus laevis]  _lim(1-133(1500),133)
GGQYPASEHEQG--VQKAMTFAMQEYNKQS--NDMFLNTITKVNGVTKQLVSGTVYRIDAVVSRTECKKSAVGV--QNCPVHTDGNFAKSMNCQFEVLTIPWQRENKLQKKTC-
>gi|327270594|Anolis_carolinensis|XP_003220074.1| PREDICTED: cystatin-like [Anolis carolinensis] _lim(1-136(1500),136)
GAPIEVSADDEG--VQQALRFAMNEYNRAS--NDRYGSRVDEVLSVTKQIVAGVKYNIAAKVGRTTCSKSEANL--ETCAFHEAPELARHVTCHFEVYSVPWLNKITLKRNNC-
>gi|47228996|Tetraodon_nigroviridis|CAG09511.1| unnamed protein product [Tetraodon nigroviridis] _lim(1-130(1500),130)
GGFQDVDPNDEG--VKGALNFAVVQHNRAS--NDMYLRQVAEVVKVQRQVVSGLKYVITVNMARSLCRKSSPQ---EVCEI---PQSAQPYQCTFTVWTRPWVNEVKLLNETCP
>gi|213513816|Salmo_salar|NP_001133678.1| Cathepsin F [Salmo salar]  _lim(1-475(1500),475)
GSSVRLSENDPG--LKKALKFAEERYNMGS--NTMHVRRVSKILSASKQLVKGIRYSIMVELSNTQCKKAARL---MTCDFYPEEHNLKTEVCVFEVWDIPWESKSTLLNQKCQ
>gi|185136366|Oncorhynchus_mykiss|NP_001118176.1| cystatin precursor [Oncorhynchus mykiss]  _lim(1-130(1500),130)
GGPMDANMNDQG--TRDALQFAVVEHNKKT--NDMFVRQVAKVVNAQKQVVSGMKYIFTVQMGRTPCRKGGVE---KVCSVHKDPQMAVPYKCTFEVWSRPWMSDIQMVKNQCE
>gi|117606135|Danio_rerio|NP_001071036.1| cathepsin F [Danio rerio]  _lim(1-473(1500),473)
GSPVRLSDSDPG--VMKAVKFAEERYNMGS--NAMHICRVSKILSASKQLVKGVRYSIMVEIGSTQCKKAAELSTADTCDFFPEPHKQKTEVCLFEVWDIPWENKSTLLKQKCQ
>gi|318054564|Ictalurus_punctatus|NP_001187957.1| cystatin [Ictalurus punctatus]  _lim(1-129(1500),129)
GGPVDVDINRED--VQNALQFAVSEHNKAS--NDAFVSQVSRVIKAQTQVVSGVNYIFTVELVRTACRKGGVE---KVCPTLKNPDPAVSHECRLKVWNQPWTGTIKLVENTC-
>gi|130485692|Oryctolagus_cuniculus|NP_001076175.1| cystatin-C precursor [Oryctolagus cuniculus]  _lim(1-148(1500),148)
GGLEDVDAQEKD--VQRALGFAESEYNKGS--NDRYHSRALQVVRARRQIVSGVKYYLDVLIGRTTCTKTQTNL--ANCPFHDQPDLQRKMLCSFEIYSVPWLNKISLLKSDCQ
>gi|27806675|Bos_taurus|NP_776454.1| cystatin-C precursor [Bos taurus]  _lim(1-148(1500),148)
GGLMEADVNEEG--VQEALSFAVSEFNKRS--NDAYQSRVVRVVRARKQVVSGMNYFLDVELGRTTCTKSQANL--DSCPFHNQPHLKREKLCSFQVYVVPWMNTINLVKFSCQ
>gi|149733367|Equus_caballus|XP_001491601.1| PREDICTED: similar to cystatin 13 [Equus caballus] _lim(1-141(1500),141)
REFQDIPESYVY--VQQALWFAMKKYNQAS--RDKYSYKVVKVLKSQEQVTDSLDYFLEVKIARTMCKKIAGES--ENCLLQQDPKMQKMFLCTFIVASKPWKFELNMLKKHCK
>gi|113205858|Sus_scrofa|NP_001038067.1| cystatin-C [Sus scrofa]  _lim(1-146(1500),146)
GGLIDADVNEEG--VQQALSFALSEYNKAS--NDAYHGRVLRVLRVRKQVVAGMNYFLEVEIGRTTCTKSQANL--DNCPFPNQPDLQKKTLCSFQVYTVPWKGTTSLVKSSCR
>gi|301792425|Ailuropoda_melanoleuca|XP_002931179.1| PREDICTED: cystatin-C-like [Ailuropoda melanoleuca] _lim(1-161(1500),161)
GGVFDADVNEDD--VQEALNFALSEYNKAS--NDAYHSRAIRVVRARKQVVAGMNYFLEVEIGRTTCTKSQPNL--DSCPFHDQPRLMRKTLCSFQIYTVPWLGKTSLVKSSCQ
>gi|73990998|Canis_lupus|XP_848294.1| PREDICTED: similar to cystatin T [Canis familiaris] _lim(1-141(1500),141)
RTFQDIPETYVY--VQQALWYAMKEYNKAS--KDKYIFKVIKVLKSQEQVTESLDYFLEVKIARTMCKKISGEN--EYCLLQKDPQIQKMFFCTFIVATKPWKFEFTMLKKHCE
>gi|296200362|Callithrix_jacchus|XP_002747560.1| PREDICTED: cystatin-C-like [Callithrix jacchus] _lim(1-146(1500),146)
GGPMDASVEEEG--VRRALDFAVSEYNKAS--NDRYHSRALQVVRARKQIVAGVNYFLDVEMGRTTCTKDQPNL--DNCPFHEQPHLKRKAFCSFQIYSVPWQGLMTLSKSSCQ
>gi|297706512|Pongo_abelii|XP_002830078.1| PREDICTED: cystatin-SN-like [Pongo abelii] _lim(1-141(1500),141)
GGIYDADLNDEW--VQRALHFAINEYNKAT--EDEYYRRTLRVLRAREQTVAGTNYFFDVEVGRTICTKSQPNL--DTCAFHEQPELQKKQLCSFEIYEVPWENIRSLVNSRCQ