>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/1jmo/complex.1 B 278|PDB|input
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETGQ-------PSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFADCGLRPLFEKKSLEDKTERELLESYID
>gi|4503635|Homo_sapiens|NP_000497.1| prothrombin preproprotein [Homo sapiens]  _lim(1-622(1500),622)
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE--------------------------
>gi|291384932|Oryctolagus_cuniculus|XP_002709128.1| PREDICTED: THROMBIN protein [Oryctolagus cuniculus] _lim(1-617(1500),617)
IVGGRDAQIGSAPWQVMIFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVNDILVRIGKYARSRYERNMEKISTLEKIIIHPGYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDKQIVTSLLQAGHKGRVTGWGNLKEMWTVNMNEVQPSVLQMVNLPLVERPICKASTRIRVTDNMFCAGYKPEEGKRGDACEGDSGGPFVMKNPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIRKMVDRFG---------------------------
>gi|301772502|Ailuropoda_melanoleuca|XP_002921671.1| PREDICTED: prothrombin-like [Ailuropoda melanoleuca] _lim(1-622(1500),622)
VVEGWDAEIGLAPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERSIEKISMLEKIYIHPRYNWRENLDRDIALLRLKKPIAFSNYIHPVCLPDRDTAVRLLRAGYKGRVTGWGNLKEMWTSSVTEVQPSVLQVVNLPIVERPVCKASTRIRITDNMFCAGFKPNEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQSGS--------------------------
>gi|172072659|Sus_scrofa|NP_001116457.1| prothrombin precursor [Sus scrofa]  _lim(1-623(1500),623)
IVEGSDAEIGLAPWQVMIFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALLKLRKPITFSDYIHPVCLPDKETATKLLRAGYKGRVTGWGNLKETWTTSASEVQPSVLQVVNLPIVERLVCKASTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWMQKVIDRFGG--------------------------
>gi|135806|Bos_taurus|P00735.2|THRB_BOVIN RecName: Full=Prothrombin; AltName: Full=Coagulation factor II; Contains: RecName: Full=Activation peptide fragment 1; Contains: RecName: Full=Activation peptide fragment 2; Contains: RecName: Full=Thrombin light chain; Contains: RecName: Full=Thrombin heavy chain; Flags: Precursor  _lim(1-625(1500),625)
IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDRLGS--------------------------
>gi|45382957|Gallus_gallus|NP_989936.1| prothrombin [Gallus gallus]  _lim(1-607(1500),607)
VVHGNDAEVGSAPWQVMLYKKSPQELLCGASLISNSWILTAAHCLLYPPWDKNLTTNDILVRMGLHFRAKYERNKEKIVLLDKVIIHPKYNWKENMDRDIALLHLKRPVIFSDYIHPVCLPTKELVQRLMLAGFKGRVTGWGNLKETWATTPENL-PTVLQQLNLPIVDQNTCKASTRVKVTDNMFCAGYSPEDSKRGDACEGDSGGPFVMKNPDDNRWYQVGIVSWGEGCDRDGKYGFYTHVFRLKKWMRKTIEKQG---------------------------
>gi|148231615|Xenopus_laevis|NP_001086517.1| lipoprotein, Lp(a) [Xenopus laevis]  _lim(1-607(1500),607)
IVKGETAEPGSAPWQVMLFKKSPQELLCGASLLSDRWVLTAAHCIFYPPWDKNYTTDDILVRIGKHYRTKYERATERIALLERIIVHPKYNWKENLDRDIALIQLKRPVAFSNYIHPVCLPTKDIVVKLLSAGYKGRVTGWGNLQETWSAGAQNL-PQTLQQINLPIVDQETCKSSTKIKITDNMFCAGYSPEDSKRGDACEGDSGGPFVMKDPDTGRWVQLGIVSWGEGCDRDGKYGFYVHLHRLRKWLMKTIEKFGSS-------------------------
>gi|62751950|Xenopus_(Silurana)|NP_001015797.1| coagulation factor 2 (thrombin) [Xenopus (Silurana) tropicalis]  _lim(1-607(1500),607)
IVKGETAEPGSAPWQVMLFKKSPQELLCGASLLSDRWVLSAAHCIFYPPWDKNYTTDDILVRIGKHFRTKYERATERIAQLERIIVHPKYNWKENLDRDIALIQLKRPVAFSNYIHPVCLPTKDTVVKLLAAGYKGRVTGWGNLQETWTSGAQNL-PQALQQINLPIVDQETCKSSTNIKVTDNMFCAGYNPEDSKRGDACEGDSGGPFVMKDPDTGRWVQLGIVSWGEGCDRDNKYGFYVHVHRMRKWIMKTVEKFGS--------------------------
>gi|47087349|Danio_rerio|NP_998555.1| prothrombin [Danio rerio]  _lim(1-524(1500),524)
IVGGDEAEVASAPWQVMLYKRSPQELLCGASLISDEWILTAAHCILYPPWNKNFTINDIIVRLGKHSRTKYERGIEKIVAIDEIIVHPKYNWKENLNRDIALLHMKKPVVFTSEIHPVCLPTKSIAKNLMFAGYKGRVTGWGNLRESWTSNPSNL-PAVLQQIHLPIVDQSICRNSTSVIITDNMFCAGYQPDDSKRGDACEGDSGGPFVMKSPSDNRWYQIGIVSWGEGCDRDGKYGFYTHLFRMRRWMKKVIEKTDSGDDE----------------------
>gi|47214440|Tetraodon_nigroviridis|CAF95775.1| unnamed protein product [Tetraodon nigroviridis] _lim(1-586(1500),586)
IVGGDDAEVASAPWQVMLYKRSPQELLCGASLISDEWVLTAAHCILYPPWNKNFSASDILVRLGKHNRAKFERGIEKIMVIDRIIVHPKYNWKENLNRDIALLHLRLPVPFSDVIHPICLPNKNVARMLMTQGFKGRVTGWGNLKESYNPAARNL-PTYLQQIHLPIVEEDVCRSSTSIRITDNMFCAGYKPEDSQRGDACEGDSGGPFVMKHPEENRWYQMGIVSWGEGCDRDGKYGFYTHLFRMTKWMR----------------------------------