>gi| /home/andreani/potential/BENCHMARK/BM4/SCORE_DECOYS_15deg/1JIW/complex.1.pdb A 470|PDB|input
GRSDAYTQVDNFLHAYARG--GDELVNGHPSYTVDQAAEQILREQASWQKAPGD-SV-LTLSYSFL-TKPNDFFNTPWKYVSDIYSLGKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFS-SSVGGA-----AFAFLPDVP---DALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEG-DPTYAD-ATYAEDTRAYSVMSYWEEQNTGQDF----KGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAESS-AAAPDTLRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGKAGQAILSYDAASKAGSLAIDFSGDAHAD-FAINLIGQATQ-ADIVV
>gi|15596446|Pseudomonas_aeruginosa|NP_249940.1| alkaline metalloproteinase precursor [Pseudomonas aeruginosa PAO1]  _lim(1-479(1500),479)
GRSDAYTQVDNFLHAYARG--GDELVNGHPSYTVDQAAEQILREQASWQKAPGD-SV-LTLSYSFL-TKPNDFFNTPWKYVSDIYSLGKFSAFSAQQQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFS-SSVGGA-----AFAFLPDVP---DALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEG-DPTYAD-ATYAEDTRAYSVMSYWEEQNTGQDF----KGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAESS-AAAPDTLRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGKAGQAILSYDAASKAGSLAIDFSGDAHAD-FAINLIGQATQ-ADIV-
>gi|70729851|Pseudomonas_fluorescens|YP_259590.1| protease PrtA [Pseudomonas fluorescens Pf-5]  _lim(1-515(1500),515)
QASHAYQQVLAFSHLYDRG--GSELVNGKPSFTADQAADSILRKGLSWHDQNGD-GK-IDLSYSFLTEKPANYN--P--------ALGSFSEFSALQKAQALLSLQSWADVANVTFTEAAKGGDGHMSFGNYN-VSTGGA-----AFAYLPSG----SSYDGQSWYLINDQYRVNETPGNGNYGRQTLTHEIGHSLGLSHPGVYNAGSG-SPTYND-VTYAQDTRGYSLMSYWSESNTGQDFSKDGGGAYASAPLLDDIVAVQKLYGANLETRADDTVYGFNSNTGRDFYSAHSASDKLVFAVWDGGGNDTLDFSGFTQNQKINLNEGGFSDVGGLVGNVSIAHGVTVENAIGGSGNDLLIGNAAANILEGGAGNDIIYGGGGGDTLWGGAGADTFVYGAAADST-FDAPDWIMDFVSGEDKIDLTGIPQFASGGATLNFVSGFTGHAGDAILTYYAETNQTSLMIDLTGHGAVD-FAVGTVGQAAV-TDII-
>gi|104780724|Pseudomonas_entomophila|YP_607222.1| alkaline metalloprotease precursor AprA [Pseudomonas entomophila L48]  _lim(1-485(1500),485)
GPSSSYGLINSFAHQYDRG---GANVNGKPSYTVDQAANYLLRDGAAWKDLNKD-GT-ISLSYTFLTKAPSDFY--SR-------GLGTFSQFSDLQKGQAKLAMQSWADVAKVTFTEAASGGDGHMTFGNFS-ASNGGA-----AFAYLPFDMP--GSHKGESWYLINSSYQVNTTPGTGNYGRQTLTHEIGHVLGLSHPGDYNAGEG-NPTYRD-ATYAQDTRGYSVMSYWSESNTGQNFVKAGGQYYASAPLMDDIAAIQKLYGANYATRSGDTVYGFNSNADRDFYSATSSSSKLVFSVWDGGGNDTFDFSGFTQNQKINLNETSFSDVGGMIGNVSIAKGVTIENAFGGSGNDLLIGNALANVLKGGAGNDIIYGGGGADQLWGGTGADTFVFGAISDST-KAAPDRIMDFTSGQDKIDLSAISAFAVNKLPLQFVNAFTGHAGEAVLSYDQGTNLGSLSIDFTGNSSAD-FLVTTVGQAAV-TDIV-
>gi|66046392|Pseudomonas_syringae|YP_236233.1| serralysin [Pseudomonas syringae pv. syringae B728a]  _lim(1-476(1500),476)
ATSTSFDQINAFAHQYDRG--GNLTINGKPSYSVDQAADYILRDDASWTDRDGN-GT-INLTYTFLTAKPAGF---DN-------SLGTFSAFNAQQKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSNGSAGGA-----AFAYLPSGN---SRTDGQSWYLVDNSYKVNTTPDNGNYGRQTLTHEIGHTLGLSHPGDYNAGEG-NPSYKD-ATYAEDTRGYSVMSYWSESNTDQNFVKGGAPSYSSAPLLDDITAVQQLYGANMSTRAGDTVYGFNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQKINLNAASFSDVGGMVGNVSIAKGVVVENALGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGASSDSN-RAGQDTIRDFVSGQDKIDVSAISTLSA----LQFVNAFSGHAGEAILNYNQSSNLGSLAIDFTGQGIGD-FLVGTVGQALA-TDIV-
>gi|28870496|Pseudomonas_syringae|NP_793115.1| alkaline metalloendoprotease [Pseudomonas syringae pv. tomato str. DC3000]  _lim(1-475(1500),475)
ATSTSFDQINTFAHEYDRG--GNLTINGKPSYSVDQAANFILRDDAAWADRDGN-GT-INLTYTFLTAKPAGF---NN-------ALGTFSAFNAQQKAQAVLSMQSWADVAKVSFTQAASGGDGHMTFGNYSDGSNGGS-----AFAYLPSG----GRTDGQSWYLISDSYRQNVSPDNGNYGRQTLTHEIGHTLGLSHPGDYNAVDG-NPTYKD-ATYAEDTRGYSVMSYWSESNTDQNFVKGGASSYSSAPLLDDIAAVQQLYGANLSTRATDTVYGFNSTAGRDFYSATSASSKVVFSVWDGGGKDTLDFSGFTQNQKINLNAASFSDVGGMVGNVSIAKGVVVENAIGGSGNDLLIGNAAANDLKGGAGNDIIYGGGGADSLTGGAGADIFVFGASSDSN-RAAQDTIRDFVSGQDKIDVSAISTLSA----LQFVNAFSGHAGEAILNYNQSSNLGSLAIDFTGQGAGD-FLVGTVGQAFA-TDIV-
>gi|157368459|Serratia_proteamaculans|YP_001476448.1| serralysin [Serratia proteamaculans 568]  _lim(1-504(1500),504)
ATGSGYNAVDDLLHYHERG--NGIQVNGKDSFSNEQAGLFITRENQTWNGYKVF-GQPAKLTFSFPDYKFSSTN--VA-------GDTGLSKFSAEQQQQAKLSLQSWSDVANLTFTEVAAGQKANITFGNYSQDRPGHYDYGTQAYAFLPNTIYQGQDLGGQTWYNVNQSNVKH--PASEDYGRQTFTHEIGHALGLSHPGEYNAGEG-NPTYND-VTYAEDTREFSLMSYWSETNTGGDN----GGHYAAAPLLDDIAAIQHLYGANLSTRTGDSVYGFNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQRINLNETSFSDVGGLKGNVSIAAGVTIENAIGGSGNDVIVGNAVNNVLKGGAGNDVLFGGGGADELWGGAGKDIFVFSAVSDSA-PGASDVIKDFQKGTDKIDLSFFNQGKQSGDQIHFVDHFSGSVGEALLTYNASNNVSDLALNIGGHQTPD-FLVKIVGQVDVTTDFI-
>gi|251789714|Dickeya_zeae|YP_003004435.1| Serralysin [Dickeya zeae Ech1591]  _lim(1-478(1500),478)
APSSSYNSIYDLLHYHERG--NGLTINGKPSYSIEEAGDQITRDNVSWNGANVF-GKSANLTFKFLQSARST----PD-------GDTGFVKFNAAQISQAKLALQSWADVANVTFTEVTGNQSANVTFGNYTRDSSGRLDYGSQAYAYLPGS----GSASGTTWYNYNVDNIRS--PDTMEYGRQTLTHEIGHALGLNHPGDYNAGEG-NPSYSD-VTYAEDTRQFSIMSYWSEKNTGGDF----KGHYAAGPMLDDIAAIQRLYGANMTTRTGDTVYGFNSNTDRDFYTATSSSKALIFSAWDAGGNDTFDFSGYSNNQRINLNEGSLSDVGGLKGNVSIAEGVTIENAIGGSGNDLLIGNNADNTLRGGAGDDVLFGGSGADRLYGGSGRDTFVYSATSDSK-VAAPDWILDFQTGTDKIDLSALNTGNN----LHFVNQFSGSGGEIMLNWDASANTSNLYLNLDNNTSPE-FLVKIVGQVSQTADFV-
>gi|253687942|Pectobacterium_carotovorum|YP_003017132.1| Serralysin [Pectobacterium carotovorum subsp. carotovorum PC1]  _lim(1-476(1500),476)
AAGTGYSDVYDLYNYHSRG---DGQLNGKPSFTSDLAAKEIVRDGLTWNGTNVF-GKSANLTYSFLQNVRSI----PS-------GDQGFVKFSAAQEQQAKLSLQSWSDVANVTFTQVSPTQKATITFGNYTRDSSGRLDYDTQAYAYMPGN----HSAAGSAWFNYNSDTVRN--PAT-EYGKQTLTHEIGHALGLNHPGSYNAGEG-NPTYRD-VTYAEDTRQFSLMSYWSEQNTGGDF----QGHYAAGPLIDDITAIQYLYGANMNTRTGDTVYGFNSNTGRDFYSANSSSDKLIFSVWDAGGTDTFDFSGYRNDQRINLNEGGFSDVGGLKGNVSIAHGVTIENAIGGSGNDIIIGNDANNILNGGAGDDVIYGGGGADTLTGGAGKDIFVYASASDSSYKNGYDTITDFQRGIDKIDLSALNQNKD----LQFVDAFTGRGNEALLDWDAGSNTTNLWLNFAGQTTPD-FVVHIVGQPSAATDFI-
>gi|50121709|Pectobacterium_atrosepticum|YP_050876.1| metalloprotease [Pectobacterium atrosepticum SCRI1043]  _lim(1-469(1500),469)
AAGTGFSDVAPLFYNHVRG--DDVVLKGKPSFTSEQAGWQIVRDGLTWNGTNVF-GKSADLTYSFLQNVKSI----PS-------GDQGFVKFSAAQEQQAKLSLQSWSDVANLTFTQVSPTQKATITFGNYTRDSSGRMDYDTQAYAYMPGN----HSAAGSAWFNYNADTVRN--PAT-EYGKQTLTHEIGHALGLNHPGDYNAGEG-NPTYRD-VTYAEDTRQYSLMSYWSEQNTGGDF----KGHYAAGPLIDDIAAIQLLYGANMDTRTGDTVYGFNSNTGRDFYTTNSNSQKLIFSVWDAGGNDTFDFSGYKDNQIIDLNEGRFSDVGGLKGNVSIAHGVTIENAIGGSGNDIIIGNSADNILQGGA---------GADTLTGGAGKDIFVYASASDSSNTTGYDTITDFQRGIDKIDLSALNQNKD----LQFVDSFTGLGNEALLDWDAGSNTTNLWLNFAGQTTPD-FLVHIVGQPSAATDFI-
>gi|253988086|Photorhabdus_asymbiotica|YP_003039442.1| hypothetical protein PAU_00605 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]  _lim(1-484(1500),484)
SGSEKANELLKWLQAYIPGKDSNIVVEHEPS---KDAAKELIRGDYRWGHQDDDKSKAFQLKYNFLESKPDDM---PW-------HISEFSAFNEEQKAAAKLSIQSWADVANINFVETSDVKEANITFGFFDVSLTGSY-----AFAYLPRP----EKTQLGTWYNAKSRTFTNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFSEKNTGQDF----KGIYSSAPLLNDISAIQEVYGANNTTRTDDTIYGFNSNTERDFYTAKDENSKLLFTAWDAGGNDTFDFSGFTQDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDADNTLKGGAGDDIIYGGLGADNLWGGEGKDTFVYLSAKESP-PLERDWIHDFVSGEDKIDVSLFDLGELGKGGVKFVEEFTGAVGEAVLRYNTVDKVNDFVINMGGKLSYDDFWVKIVGEPILESDFIL
>gi|37524656|Photorhabdus_luminescens|NP_928000.1| alkaline metalloprotease precursor PrtA [Photorhabdus luminescens subsp. laumondii TTO1]  _lim(1-480(1500),480)
SGSEKANELLKWLQAYIPGKDSNIVVEHEPS---KDAAKELIRGDYRWGHQDDDKSKAFQLKYSFLESKPDNM---PW-------HISEFSAFNEAQKAAAKLSIQSWADVANINFVETTDAKEANVTFGFFDVSLTGSY-----AFAYLPTP----EKTQVGTWYNAKSRTFLNNDIDVNGYGRQTFTHEIGHTLGLQHPADYNASDKVSPTYKNSATYFEDSRAYTVMSYFGEKNTGQDF----KGIYSSAPLLNDISAIQAVYGANNTIRADDTVYGFNSNTDRDFYTAKDENSKLLFTAWDTGGNDTFDFSGFTQDQRINLNEASFSDVGGLKGNVSIARGVTIENAIGGSGNDVLIGNDAANTLKGGAGDDIIYGGLGADNLWGGEGNDTFVYLSAKESP-PLERDWIHDFVSGKDKIDVSLFDLGEAGKGGVKFVREFTGEVGEAVLRYNTVDKVNDFAINLGGEFSYDDFWVKIVGEPILESDFIL