>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/1I2M/complex.1 B 401|PDB|input
KKVKVSHRSHS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEPGLVLTLGQGDVGQLGLGE------NVMERKKPALVSI--PED--------------------VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSV---------------------------EGSEMVPGKV---ELQ-----EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLL--EPM----------------KKSMVPVQVQLDV-------PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQG---LERL-----------------LVPKCVM-LKSRG------SRGHVRFQDAFCGAYFTFAISHE-----GHVYGFGLSNYHQLGTPGTESC---------FIPQNLTSFK-----NSTK----SWVGFSGGQHHTVCMDSE-GKAYSLGRAEYGRLGLG--------------------------------------------------------------EGAEEKSIPTLISRLP----------------------AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ-DEDAWSPVEMM-GKQL--ENRVVLSVSSGGQHTVLLVKDKEQS
>gi|62859419|Xenopus_(Silurana)|NP_001016101.1| regulator of chromosome condensation [Xenopus (Silurana) tropicalis]  _lim(1-420(1500),420)
VKKTKVNHSSY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTVGGQVLTLGQGDVGQLGLGE------DVMERKKPALVTL--PED--------------------IVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSE---------------------------EGSETQPGKV---DLV-----EKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLL--EPM----------------KKSMVPVQMQINA-------PVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKG---LERL-----------------LVPQCIH-LKAKG-------SGRVHFQDVFCGAYFTFAVSQE-----GHVYGFGLSNYHQLGTKTTQSC---------FAPQNLTSFK-----NSTK----SWVGFSGGQHHTICVDSE-GKVYSLGRAEYGRLGLG--------------------------------------------------------------ENAEELSEPTPIPILP----------------------KTKSVACGASVSYAVSNDGRVFAWGMGTNLQLGTGE-EEDVWSPQEMT-GKQL--EDRDVLSVSSGGQHTVLLVRKR---
>gi|55742589|Danio_rerio|NP_998343.1| regulator of chromosome condensation [Danio rerio]  _lim(1-418(1500),418)
VAKKLKVSHIS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGQEKGLVLVLGQGDVGQLGLGE------DVMERKKPALVTL--PEG--------------------IVQAVAGGMHTVCLSDTGNVYTFGCNDEGALGRDTSE---------------------------EGSETVPAKV---DLG-----EKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLL--EPM----------------KKCTVPVKVPIDK-------PVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKG---LMRL-----------------LEPQMVIIKPRGK----------VVFTDVFCGAYFTFAVSKE-----GHVYGFGLSNYHQLGTQSTNTC---------FVPVKLSSFK-----NSTT----SWVGFSGGQHHTLCLNSE-GKAYSLGRAEYGRLGLG--------------------------------------------------------------KDVGEKSEPTVVPGIS----------------------DVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGE-EEDEWSPVEMT-GKQL--ENRVVLSVSSGGQHTVLLVKDKQE-
>gi|321478568|Daphnia_pulex|EFX89525.1| hypothetical protein DAPPUDRAFT_206077 [Daphnia pulex] _lim(1-404(1500),404)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVLSMGQGDVGQLGLGP------DVLEKSRPALVDK--VKD--------------------VIDVIAGGMHTVCLTSKGEIYTFGCNDEGALGRDTSE---------------------------EGSEFEPGLV---KLP-----GKATLISAGDSHTAALLEDGRCFIWGTFRDSHGPMGLN--ESG-----------------SQKLPVPILEGI-------PMTQIASGADHLVCLSSDGQVYTCGCAEQGQLGRVAEVFSNRGGRKG---KSYL-----------------LTPQPVA-LGKGK--------RRIVIDSVWTGSYATFARAKE----TGLIYVFGLNNYNQLGLPSQDAR---------FQPEVSDGFK-----GH------RWLSISCGQHHTLALDEN-GQVYSLGRKEYGRLGMG--------------------------------------------------------------ADAKDLAIPTPIPALQSQ--------------------KCVEVTAGESVSLAVTESGMAFSWGMGTNGQLGLGH-EDDVLEPTTIK-GKAL--ENRLVLLASAGGQHTVLLAADKSST
>gi|327315378|Apis_mellifera|NP_001192152.1| regulator of chromosome condensation [Apis mellifera] _lim(1-431(1500),431)
KQIRKKQELVV------------------------------------------------------------------------------------------------------------KPDLR-------------------------------------------------------------------------------QSATGGVLLVFGQGDVGQLGLGE------EVVEKTRPAVVPG--YQD--------------------IISVAAGGMHNVCLRQTGEVLTFGCNDEGALGRDTSK---------------------------DGSETEPGSV---ELP-----NKAIQVTAGDSHSAALLEDGRVFAWGSFRDSHGTMGLT--LKG-----------------NERFPIEILPNV-------NVVKIASGADHLVLLDKNGHVYTCGCGEQGQLGRVAARTASRNTRHG---MGPL-----------------LTPGLVE-FKVTK---------KLEFDDIWAGTYCTFAKEYQ----KGDIYVFGLNNYYQIGLKDPVTH---------FHPQVSKTFS-----GK------VWRHISSGQHHTIALDDS-GQVFVMGRKEYGRLGLG--------------------------------------------------------------SNCLDAKELTLVPNLSSF--------------------KCIDVAAGSAQSFAVTELGDLYSWGMGSSGQLGTGE-EEDVEEPTLVK-GKQL--EGKTVVRVAGGGQHTLTLATIHPMK
>gi|157116974|Aedes_aegypti|XP_001652914.1| regulator of chromosome condensation [Aedes aegypti]  _lim(1-519(1500),519)
AAKVARSTTKF---------------------------------------------------------------------------------------------------------ELPLPV---------------------------------------------------------------------------------LPKPCGNVLSCGQGEVGQLGLGE------DVMEKTRPALIDS--LKE--------------------IVEISAGGMHNLCLNRKGEVYSFGCNDEGALGRATAD--------------------------EEGSEFEPRKI---QLP-----APCLKISAGDSHSACLLNDGRVYAWGSFRDSHGNMGLT--LEG-----------------NKRLPVEVVPGL-------KSVDIASGGDHLVVLSENGHVYTVGCAEQGQLGRISTRAASGESRRG---KTDL-----------------LQPGVVT-LRGKK----------VLADAIWASTYCTFFRDRN----TAKIFAFGLNNYCQLGIPNPSEN--------VVKPVFVPEQT-----SFT-----DVKSIAGGQHHTLVLKTD-NKVHVIGRKEYGRLGLG--------------------------------------------------------------NVTEDAKVVTPVEALADK--------------------NVVEICCGESASFAVTDKGEVYAWGMGSNQQLGTGN-EDDETTPVQIN-SKQV--QGKRILKVSSGGQHSLFLVEEKPAK
>gi|158288412|Anopheles_gambiae|XP_310274.6| AGAP003742-PA [Anopheles gambiae str. PEST]  _lim(1-514(1500),514)
RTKKLEIPLAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPKLSGNVLACGQGEMGQLGMGE------DVMEKTRPAVIEG--LSD--------------------VVQISAGGMHNLCLTRHGTVYSFGCNDEGALGRDTSE---------------------------EGSEFEPKQI---DLP-----GQCVKISAGDSHSACLLDDGRVYAWGSFRDSHGNMGLT--LEG-----------------NKRLPIEVLPGN-------RWVDIASGCDHLVLLSDIGHIYTVGCAEQGQLGRVSIRAASGESRRG---KTQL-----------------LQPGIVT-RRGKM----------IVAEAIWATTYCTFYKDYQ----TGRIFAFGLNNYCQLGIPNPSEN--------VVKPVFVPEPT-----SFD-----EVVQIAGGQHHTLVLKTD-HKVYAIGRKEYGRLGLGD-------------------------------------------------------------DVTEDAKTLQPVAALGDK--------------------KVVSVCCGESTSFAVTDKGELYAWGMGSSLQLGTGL-ETDEAKPVLIA-SKQV--AGKVILKASSGGQHSLFLVQETPVS
>gi|18859625|Drosophila_melanogaster|NP_523943.1| Bj1 protein, isoform A [Drosophila melanogaster]  _lim(1-547(1500),547)
KAKRARIAFHL---------------------------------------------------------------------------------------------------------ELPK-----------------------------------------------------------------------------------RRTVLGNVLVCGNGDVGQLGLGE------DILERKRLSPVAG--IPD--------------------AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSE---------------------------DGSESKPDLI---DLP-----GKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLT--IDG-----------------NKRTPIDLMEGT-------VCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRG---KRDL-----------------LRPTQLI-ITRAK-----------PFEAIWATNYCTFMRESQ----TQVIWATGLNNFKQLAHETKGKE-------FALTPIKTE-LK-------------DIRHIAGGQHHTVILTTD-LKCSVVGRPEYGRLGLG--------------------------------------------------------------DVKDVVEKPTIVKKLTE---------------------KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGD-GDDELEPIVVV-SKNT--QGKHMLLASGGGQHAIFLVKADKQD
>gi|195431549|Drosophila_willistoni|XP_002063799.1| GK15861 [Drosophila willistoni]  _lim(1-469(1500),469)
KVKRSRISFRL---------------------------------------------------------------------------------------------------------ELPKRRYR-----------------------------------------------------------------------------------VGKVFVCGFGDIGQLGLGD------DIIERKHLSPVES--IQN--------------------LVDISAGGMHNLVLTKSGKIYSFGCNDEGALGRITTE---------------------------KYSESVPGLV---VLP-----GKALKISAGDSHSACLLEDGRVFAWGSFRNSHGNMGLT--IDG-----------------NKRMPFNLLEGF-------VCVSIASGVDHLVILTNKGKVYTVGCADHGQLGRISERSLLGEGRRG---KRDL-----------------LQPNQVV-IRKAK-----------PIEAIWTSNYCTFLRESV----THNIWAMGLNNYSQLGYDKKVDR--------VLMPFKTD-LK-------------HIRQISGGDHHTLVLDNN-SRCYVIGRPEYGRLGLG--------------------------------------------------------------NVNKVASELTQIRTITS---------------------KVVHIECGTCCSYAIDQDGKLYSWGLGTNHQLGVGD-GEDALEPVWVN-SKAI--LEKRVLLADAGGQHGIFLVEANPPQ
>gi|241750184|Ixodes_scapularis|XP_002405888.1| regulator of chromosome condensation, putative [Ixodes scapularis]  _lim(1-405(1500),405)
KAKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELVGQAYSLGTGDVGQLGLGP------DVLEKSRPALVAG--HTD--------------------VVDVVAGGMHSLLLSSTGQVFSFGCNDEGALGRQTSS--------------------------LDGSETTPGAV---ELP-----EPVTHVSAGDSHSAALTVSGAVFVWGSFRDSSGFMGLL--AAG----------------KSEPKPVHIAD---------GIVQIASGNDHLVLLSKDGRLLTLGDAEQGQLGRVARCFASRGGRKG---LSNL-----------------LQPMPVV-VSKPR--GC----SSAAFDHVWTGSYVTFARMRD----NGALYGFGLNNYHQLGSLASTSS----GDLVQFMPTLLTSCT-----EH------RWKKVCGGQHHTMLLDEE-GGVYAMGRHDYGRLGLG--------------------------------------------------------------PDCTEQETPRKVPGLP----------------------PCVDISCGDSVSFAVTAEGRVFSWGLGDNLQLGHGDDSEDVHEPKVMT-GKLI--SSKKALLVSGGGQHALILAID----
>gi|260831025|Branchiostoma_floridae|XP_002610460.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]  _lim(1-652(1500),652)
WNVRTLVSNSSKLYQLASVIDDYRLDLLGVTETHMPSSGIEKLENGSLLVFSGLDSAIIMITDKQWKKLRELWTRGLMKTNPDCPRLSALVEEAVGVGLSMDQYFMKTARASTGMAQLAPQSINVMVMLAMAHDDLGVRTGLSLQDQMAMISLPMDMALFKTRKRAADSTADDVIKTKSRRAWPKASDVTEPQVQRVQPS---CRTVEGVVLVLGQGDTGQLGLGQ------DVMERKKPGLVAI--QDK--------------------VIDVCAGGMHTVVLTVKGEVWSWGCNDEGALGRDTSE---------------------------IGTETVPGKV---ELS-----SKIAQLGAGDSHTIALTTDGRVWCWGTFRDNNGQFGLT--SDG----------------KVQPRPVEIPLSA-------RVLKISSGESHVACLTEDGDLYTFGCGEQGELGRIAECFTVRGGRKG---RSLL-----------------LDPAPVR-MKGKM----GSRKSHMKFADVFCGSHNTFAISDD----KEDVYAFGMNNYYQMGLDGDAAR---------YVPEKVESLS-----GK------RWTQIVGGQHHTVALSAD-GEVYVMGRGQYGRLGLGE-------------------------------------------------------------DMDKEVTKPTQLTELR----------------------NICGVATGSSVSFAVTKNGEPYSWGMGTNLQLAQSN-DDDVWVPTKMT-GRQL--ENRDVVLVSGGGQHTVMLARDKDNI
>gi|156361074|Nematostella_vectensis|XP_001625345.1| predicted protein [Nematostella vectensis]  _lim(1-440(1500),440)
GGKRAKDKT-----------------------------------------------------------------------------------------------------------KEKQDVFT-------------------------------------------------------------------------------SSLESGQALTLGQGDVGQLGLGP------DTLERKKPAVPID--LEGVP------------------IVQVESGGMHTVALSKDGKVYTWGCNDDGALGRETTS--------------------------EGEEEFQPGVV---SMP---DDVNIVMVSAGDSHTAALSDQGTVYAWGTYRDASGQIGLQ--PDG-----------------VKKKPAVILTSE-----SDRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRG---LAYI-----------------LEPALVR-SKKGL-----------KFKDVFCGSFATFVVAKT----GSDVYAWGLNNYGQLGTGDVQTW---------HFPVKVKSLS-----QLNKSEKDKHITIANGQHHTIVCDPN-GKVYALGRADYGRLGLG--------------------------------------------------------------DGAKETALPAHITSLDNE--------------------VIEKVACGECVSFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKVQ-GKNLNSETHRVLGVSAGGQHTVILAAER---
>gi|196008365|Trichoplax_adhaerens|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]  _lim(1-429(1500),429)
QSKRQKARLSL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASDEAGIVLVLGQGELGQLGLGE------EILERSRPTAVKK--LLEVE------------------FIQVACGGVHTVALTKAGEIYTWGCNDECALGRDTSD--------------------------TSEAEYLPGLV---DGL---DNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIGLN--LAG-----------------KQPRPIVMLGDP-----NDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQG---LKRF-----------------LQPAVARVTQRSK--------KDIRFSDIFVGPYNLFAVNAA-----GEVFACGLNNYGQIGNGNITSL---------YYLAKIDSLS-----ALNDGNDERQILIASGEHHTLILARN-GRVYSIGRGDYGRLGLG--------------------------------------------------------------PDVKECSHPTEIETLANS--------------------DIKAVTCGLAVSFAVSNSGDVYSWGMGTNLQLGSST-DDDILTPTLVK-TK----ESYNFFAASAGGQHTAILGKK----
>gi|327315376|Ciona_intestinalis|NP_001192151.1| regulator of chromosome condensation [Ciona intestinalis] _lim(1-477(1500),477)
STTKVSEKKQT----------------------------------------------------------------------GNPRKRGLDIDDENGQTPTSSQDPVNKKTKLNEEPNGDVSVFPDF-----------------------------------------------------------------------------GNLPTGVALTVGQGDMGQLGLGE------DIMSRKKPAIVAS--IADEK------------------VKKVVAGGMHTVCLTDQHKIYTFGCNDEFALGRDTAD---------------------------DDSEYEPKLI---VGP--LTERRVVHISAGDSHTCALTDGGKVFVWGSFRDGRGVIGLI--KEE----------------EVCKCPTQLTSIN------ETVVDVDSGNDHLVMVTMSGKVFTMGCPDQGQIGRIGRYFTDRGRKRK---TANY-----------------ITPAKIH-LRKVR---GS---KKPVIVKVFCGSYTTWVLSSE-----GHVYGFGLNNYKQLGFPDGENR---------YIPEYVETLS-----DI------GCKQIAGGQHHTLVLDHK-GSVYTIGRGDYGRLGHG--------------------------------------------------------------SDVIEASEPKKINSLC----------------------DITSITATSCVSFAVDKDGKAYGWGLGTNLQLTTGD-EEDEWEPVELT-GKNL--EKRSVLQVASGGQHTVILAQDNVE-
>gi|50310715|Kluyveromyces_lactis|XP_455379.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]  _lim(1-480(1500),480)
TLNHKFVSINS------------------------------------------------------------------------------------------------------------QDDYKHLY----------------------------------------------------------------------------RSVVPLDIFVWGTGSMCELGLGP----LAKNKEVKRPRLNPL--LPRDE-------------AK---IVSFAAGGMHTLALDADNNIWSWGTNDSGALGRDTSGAVEKLKDMDA------NDSDDDEDGDLNEIESTPTKIPRDSLP--LDELRCVQIAATDNLSAALFENGDVYAWGTFRCNEGILGFY--RDE---------------ITVQKTPWIIPNFS----KKAKIVQMAAGKDHILFLDETGIVYAWGNGQQQQLGR---RILERSRLRT------------------------LDPRPFG-L---D-----------NIKYISSGENHSFALSTD-----GKLYSWGLNQFGQCGISTELED-----GSLVSVPTEVILPE-----GV------EIDSVSAGEHHTLILAKS-GDLYSCGRLDMFEVGISKDKLPEYTYKDVH-------------------------------------------------GKARSIPLPTKLEDVP----------------------SFKAIAAGSHHSLAIAKNGIVYSWGFGETYAVGLGPSGDDIETPTRIK-NTAT--QDHSIVFIGCGGQFSISGGVKLSDE
>gi|45198474|Eremothecium_gossypii|NP_985503.1| AFL045Cp [Ashbya gossypii ATCC 10895]  _lim(1-486(1500),486)
KHLVSTLNKHY-------------------------------------------------------------------------------------------------------KSINKLDDYRQLY----------------------------------------------------------------------------ISDSRMDIFVWGTGSMCELGLGP----LAKNKEVKRPRLNPL--LQREK-------------AG---IVSFAVGGMHCLALDSDNNVWSWGTNDSGALGRDTSGAAEQLRDMDA------AESSDDEDGDLNELEATPTMLPRDSLP--LDTQKVVQLAATDNLSCVLFENGDVYAWGTFRCNEGILGFY--QDA---------------IESQRSPWKLPSFS-----GSRIVQMAPGKDHILFLDEHGVVYAWGNGQQYQLGR---KIMERSRLRT------------------------LDPRAFG-L---D-----------GVKYIASGENHSFALADD-----GRLFAWGLNQFGQCGISNEVED-----GAMVTVPTEVLLPP-----DV------KVESIAAGEHHSIVLTQD-GDLYTFGRLDMFEVGISAEDYPESTYKDVH-------------------------------------------------GKARSVPVPTKLKGLP----------------------KFKAIAAGSHHSLAVARNGIIYSWGFGETYAVGLGPAGEDVEVPTRIK-NTAT--QHESIVFVGCGGQFSVAGGIELSDE
>gi|50291009|Candida_glabrata|XP_447937.1| hypothetical protein [Candida glabrata CBS 138]  _lim(1-477(1500),477)
TAKRVSTKKVL----------------------------------------------------------------------------------------------------------NQLDDYTHRY----------------------------------------------------------------------------ISVRPLDVFVWGTGSMCELGLGP----LAKNKEVKRPRLNPF--LPQDK-------------VG---IVSIAVGGMHTLALDKDNNIWSWGCNDYGALGRDTSGAKEKLKDA--------NDSSDDEDGDLNELESTPTKLPFKFEGTSEKDAKIVQLVATDNLSSVLLSDGTIYAWGTFRCNEGILGFY--QDE---------------IEVQREPWVVPKFA-----KGKIVQMAGGKDHILFLDEAGIVYAWGNGQQYQLGR---KILDRFRLKT------------------------LYPLPFG-L---K-----------KVKYIASGENHCFALTET-----GKVVSWGLNQFGQCGIGESIED-----GGIVAVPSQVMNLP---LDND------SIRTISAGEHHSLFLMES-GALYTCGRIDMNEIGLLKKELPTYAYKDEH-------------------------------------------------ERVRAVPLPTKVVKTLEELDPEDDEDDREYKEM-----KFKNIAAGSHHSIAISQDGKLYTWGFGETYAVGQGPAGDDIEVPVKIT-NTAT--KEVDMVLAGSGGQFSVSAGYK----
>gi|6321341|Saccharomyces_cerevisiae|NP_011418.1| Srm1p [Saccharomyces cerevisiae S288c]  _lim(1-482(1500),482)
RAKKMSKTHAS-------------------------------------------------------------------------------------------------------HIINAQEDYKHMY----------------------------------------------------------------------------LSVQPLDIFCWGTGSMCELGLGP----LAKNKEVKRPRLNPF--LPRDE-------------AK---IISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDA------DDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFY--QDK---------------IKIQKTPWKVPTFS-----KYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR---KVMERFRLKT------------------------LDPRPFG-L---R-----------HVKYIASGENHCFALTKD-----NKLVSWGLNQFGQCGVSEDVED-----GALVTKPKRLALPD-----NV------VIRSIAAGEHHSLILSQD-GDLYSCGRLDMFEVGIPKDNLPEYTYKDVH-------------------------------------------------GKARAVPLPTKLNNVP----------------------KFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIK-NTAT--QDHNIILVGCGGQFSVSGGVKLSDE
>gi|294654461|Debaryomyces_hansenii|XP_456522.2| DEHA2A04620p [Debaryomyces hansenii CBS767]  _lim(1-498(1500),498)
NGTKKFKSATS---------------------------------------------------------------------------------------------------SFVLHSYSKLPDLNSIPL---------------------------------------------------------------------------AKTQPLDVFVWGTGSMCELGLGP----SAKTKEVKRPRLNPF--LTSEH-------------LGDSKIVDFAAGGMHTLALDSDNRVWSWGGNDSGVLGRDTSKVKEVLKDMDA------DDSEDDDDGDLNEAESTPGLV--ENLPK-LKGAKIVQLAATDNLSAVLYDNGDVYAWGCFRCNEGLLGFL--RDE---------------IKLQKTPLKIKQLK-------NVVQLARGKDHLLALDSKGIVYAWGNGQQFQLGR---RVLERHRYNG------------------------LEPKQFG-L---Y-----------NIKYIASGDFHCFAIDHD-----DQVYAWGLNQFGQCALTDSDGK--LEDGSLITSPTIIPELS-----KK------GITHLCAGEHHSMALTGD-GSVLSWGRYDMKEVGIPKDKLPESTFKDAH-------------------------------------------------GNARSVPTPTKLQFGLKSDNGV----------------KCKTIACGSHHSFAVTDDGFVYAWGFGDTYAPGLGPLEEDVEKPTRIV-NTAT--KYHDIQQINAGGQFSISGGVKIDDE
>gi|238883419|Candida_albicans|EEQ47057.1| regulator of chromosome condensation [Candida albicans WO-1] _lim(1-493(1500),493)
KAKTSLATSSF-----------------------------------------------------------------------------------------------------VLHSYSKLPNINEYAK---------------------------------------------------------------------------AKSTPLDVFVWGTGSMCELGLGP----SAKNKEVKRPRLNPY--LTEEK-------------LGGTKIVDFAVGGMHTLALDGKNRIWSWGGNDSGVLGRDTSQAKEVLKDIDGKNGNDDDDDDDDEDGDLNEAESTPALV--ENLP----EGEIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFL--RDE---------------IKLQKTPLKIKELK-------NIVQLAAGKDHLLALDSKGIVYAWGNGQQYQLGR---RILERHRYRS------------------------LEPQQFG-L---Y-----------NIKYIASGDFHCFAIDHS-----DNVYAWGLNQYGQCALTGDNGE--LEDGSVLMKPTLIPELS-----HK------GIKEIAAGEHHTLALTED-GQVYAWGRYDMKEIGIPKDKLPKSTFKDQH-------------------------------------------------GNPRSVPVPTKLEFAV----------------------KIKTIGVGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRIV-NTAT--KNEDILLIGAGGQFSVSGGVKIEDE
>gi|149235440|Lodderomyces_elongisporus|XP_001523598.1| protein RCC1 [Lodderomyces elongisporus NRRL YB-4239]  _lim(1-441(1500),441)
KKSKSSLVTSS----------------------------------------------------------------------------------------------------FILHSYSKLPDINDSPK---------------------------------------------------------------------------PKSVGLDIFVWGSGSMCELGLGP----SASTKEVKRPRLNPY--LTKEK-------------LGGTQIVDFAVGGMHTLALDGKNRIWSWGTNDSAVLGRDTSNAKEVLKDMDAAGS---DGDDDDEDGDLNEAESTPGLV--ENFP--KEGEKIVQLAATDNLSAALLSNGDVYAWGCFRCNEGLLGFL--RDE---------------IKIQKTPLKIKELK-------NVVQLAAGKDHLLALDSKGIVFAWGNGQQFQLGR---RVLERHRFRS------------------------LEPQQFG-L---Y-----------NIKYIASGDFHCFAIDHS-----DNVYSWGLNQFGQCALTGQNGE--LEDGSILTKPTLIPELS-----GL------GIKQIAAGEHHTLALTET-GEVLAWGRYDMKEIGIPESLLPESSFKDAH-------------------------------------------------GKVRSVPRPTKLKFGAKKSP------------------KIKTIGVGSHHSFAVTEDGFVYAWGFRKRMHP------------------------------------------------
>gi|19112818|Schizosaccharomyces_pombe|NP_596026.1| GDP/GTP exchange factor (RanGEF) [Schizosaccharomyces pombe 972h-]  _lim(1-539(1500),539)
VEKRELDESDV-----------------------------------------------------------------------------------MKNGKKPVKRAKVSSLPKPVRVPGSAKRINKI-----------------------------------------------------------PE----------------LPTERLNVYVFGSGSMNELGMGE-----EEMDVVYRPRLNPI--LSTDK-------------VG---VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD----------------QKDENGDKVDNDLLEGTPSKV---EGA--LSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS--DSQ----------------KRTAEPTQMRLPE--------ICQLATGTDHIIALTTTGKVYTWGNGQQFQLGR---RMLERRRLQG------------------------LTPQPLA-L---K-----------NIISVGAGSYHSFAIDNK-----GRVYAWGLNITRQCGIEVEDEE----EGAVITKPTLVDALE-----GY------NVKSITGGEHHTLALLED-GRVLAWGRDDRHQLGIPDNALPETVVKDEK-------------------------------------------------GNNYYLSTPTIIPGLT----------------------NVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVR-SKAI--KEVAIRVAGAGGQFSIIAGIPNASE
>gi|70982263|Aspergillus_fumigatus|XP_746660.1| Ran exchange factor Prp20/Pim1 [Aspergillus fumigatus Af293]  _lim(1-544(1500),544)
SAKSRKSKATS----------------------------------------------------------------------ASAAAATKKRKAEEVDKEPDVKTKKARVTQPPVKKPKPKVVINH------------------------------------------------------------------------------APTTRLNVYVCGEGSSGELGLGT----AKNAVDVKRPRLNPH--LPADR-------------VG---VVQVAVGGMHCVALTYDNKILTWGVNDQGALGRDTTW-EGGYKDIDDNKSDADSDSDSDDDSGLNPYEATPTAISSDAFP---PETVFVEVAAGDSSSFALTDDGQVYGWGTFRSNDGILGFD--VGH----------------KVQPTPTLIPSLK-------KIKHLACGDNHVLALDEKGAVFSWGSGQQNQLGR---RIIERNRLNG------------------------LQPREFG-LP--K-----------NIVHVSCGAFHSFAVDAT-----GKVYAWGLNSFGETGIREGAGD----DEAAIIHPTVVDSLS-----GK------NIVQLCGGAHHSLAVSKD-GQCLVWGRLDGFQTGLKVDTLPDDAVVKDER------------------------------------------------GRPRILIEPTPLPGI-----------------------KASVVAAGSDHSIAIDVDGRAWSWGFSATYQTGQGT-QDDIEVATVVE-NTAV--RGKKLNWAGAGGQFSVFTEPAT---
>gi|154297017|Botryotinia_fuckeliana|XP_001548937.1| hypothetical protein BC1G_12597 [Botryotinia fuckeliana B05.10]  _lim(1-587(1500),587)
TAKKPVPKKSK----------------------------------------------------------------------VTSKPASEEDAEMENEEDVETAGSDKEETPAPPKPVVSRKRSRTQ----------------------------------------------------------ESESLPVAKKLKIGASINIPPTERLDVYVFGSGENNELGLGANKINGKAPTNVMRPRYNPL--LKG--------------------VTQVAVGGMHCVALTDDQRILTWGVSDGGSLGRDTSSYEAPAKDVDA-----DSDSEDEEDIVLNPLESTPTAI-STEFL---DGRKVAQVIACDSSSFVLTEDGYVYGWGSFVGNDGIIGFT--AEGASMAAKERDGDLKKKFQIQAEPMLIPGLK-------NIKSLARGSNHVMALDNKGTVFTWGACEQNQLGR---RVNNRFKFAA------------------------LTPTPIL-----K-----------KCKSIAGGSFHSFAINTK-----GQVLSWGLNNYGQTGIASNAGG----DDAFIHNPTVVKGFE-----GF------DVKQIKGCFQHTIACTEK-QEVLVVGRCDEGQTGLDLTSVDQDTVIVSPTT-----------------------------------------------SKPAILKALTVVPGV-----------------------KATFVAGAIDNSIVLTEDGKVWAWGYGENYRIGLGS-DDTVRTPTLIE-NSAI--KGKKITFAGCGGQFSVIAGPEVTMS
>gi|85097594|Neurospora_crassa|XP_960475.1| hypothetical protein NCU05513 [Neurospora crassa OR74A]  _lim(1-618(1500),618)
TKKTAAPKAAA----------------------------------------------------------------------KKAPAPKKTAAPKAAAKKAPAPKKAAAPKKTAAAKKAAAAAKDDSDKENSVAGAKRKREEDEEEEEQEELADEKQVNGTRPMVKRAKTDEDEAAKPAPKKAKAAPKPKPEPKKKPLGKVINEAPTKVMDIFVFGEGTSGELGLGSLKYDGKKPIDVKRPRINHN--LSG--------------------IVQVACGGMHVAALTKDNKILTWGVNDQGALGRDTTW-DGGLRD-----ADAESDSEDEDDTGLNPKESTPGEIDTTDVP---EGTVWVQVVASDSATFALTATGQVYGWGTFRSNEGILGFT--RNV----------------LIQKTPALITQLS-------KIKQLAVGSNHVLALDEKNKVFAWGAGQQAQLAR---RLLERDENGA------------------------LFPASIGTLPGRA-----------KAAKLACGSYHCFIIDTK-----GRVIGWGLNNYAELGIEAEAGT----DGGFILKPQLVDSLK-----EH------NIVDIAGGEHHSLATNDK-GELLTWGRIDGHQVGHPSGSFTEENTIFDEK------------------------------------------------DKPRILVQPAVVPDIEG---------------------KIVHVAAGTDHSFAITEDGKVYSWGFSANYQTGQGT-TDDIETPTLID-NSAI--RDRKIIFAGAGGQYSILGAEPK---
>gi|58268916|Cryptococcus_neoformans|XP_571614.1| pim1 protein (poly(a)+ RNA transport protein 2) [Cryptococcus neoformans var. neoformans JEC21]  _lim(1-590(1500),590)
SRLAKVPEASI----------------------------------------------------------------------PAANGNTKRRRVSDTGEPVAKKGRPSTASVAGRGPKKIIGGINAI-----------------------------------------------------------PSIPP-------------VKTPHNALFVWGTGDQGQFGLGP-----DNLDEIGRPKLHSW--FEEQIEEGKLSRDGKPGSGG---LESVYCGGMHTLAIDEAGRVRSWGINDNAALGRITTDVP--------------DPKNPDEMIPNEDLESYPYVV---ETLE-KEGFRAVQVAAGDSISVAISDKGELRAWGSFRSNEGILGFDGVPGH---------------PKFQYTPISLPALA-----KVQITQISCGADHVLALTTIGHVYVWGKGEENQLGR---RIISRRRING------------------------LEPERLG-L---R-----------NIVHVAAGIYHSFAVDNK-----GVVYGWGLNTFHQTGVAEHQDM--------IITPTVVDALHPDKHNGS------KVIKVSGGEHHSLFLFDN-GEVWGCGRCDANELGLAEDHPAFEGIKERREELQREREERVAEKQKKLDEVLKKDKVDEEEKQKAEAELSEAQATLKVPPSGEYVPEPVRICFPPIPEKYEVVPEFPAYKDSKPEDNPVVDISAGMRHNLAVSKSGHLYAWGYGNLAQLGLGS-EEVAEVPSLVR-SKLL--RPYRSVTVSAGGQHCVALAVKKPDG
>gi|170090772|Laccaria_bicolor|XP_001876608.1| predicted protein [Laccaria bicolor S238N-H82]  _lim(1-440(1500),440)
QLKPYFNPLPV----------------------------------------------------------------------PPQ-----------------------------------------------------------------------------------------------------------------------KQRPGAILFAWGAGNFGQFGMGP-----DIIHELSKPKRNVW--VEEKIEDGAFGEDG----AG---LESIAAGGLHSVLVDEKGTIWTCGVNDDAALGRITQNVP--------------DPNNPGSFLSIDELTSIPHPL---QSLA-DDNFRAVKVVTGDSICAALSTDGELRVWGSFRVNEGSLGF---SNG---------------LKHQFKPVPILELSHKPGDTEKVSSIAAGNNHLLVLTTHGSIYTWGASEQAQLGR---KVLERRKIHG------------------------TVPEKITLGNRAR-----------KAVTVGAGAYHSFAVDDK-----GDVWGWGLNSMGQTGTGYESSD-----DSLVQLPQKVERLSKESLAGD------VVVEIVGGEHHTLFLTST-GQVFACGRCNAGQLGLAEDDSAFQNY-----------------------------------------------------PDQDFIPVPTRITFPDPDD-------------------PVVQISAGSHNNSAVTKGGALYSWGQGIQGELGVQ--EEEVRTPRV----------------------------------
>gi|50543738|Yarrowia_lipolytica|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]  _lim(1-498(1500),498)
VSKKQSAKTAK----------------------------------------------------------------------VNGVKAAAAKQELEKKTVKEEKPIPAAKAPSRLRLSAIQRKHKHS-----------------------------------------------------------PTLLPLPS----------INKVDCEVFAFGTGDMCELGLGP-----EKASTVKRPRLSPY--LSKE-------------------IVDIAVGGQHGLVLDSQGRVWSWGGNDLGALGRDTSG-HEVLKDMDA------DESDDEDDPKLNPAESIPALV--------DTDQRFVKIEASDSLSLALTAEGDVWAWGSFRNSQGTMGF---SDK---------------VKVQNRPVKIEELS-------NIAAIAAGRDHVLALTQWGTVHTWGDSENFRLGW-------KSNRST------------------------LSPRELG-L---K-----------NIVYVGAGEFHSFAIDTD-----GKVLAWGLNQYGQCGILGQSDN------AAVDGPTYVDALD-----GK------DIVAVTGGEHHSLALSKD-GTVYSFGRYDYHQIGFTTKDLPEGTVRDDK-------------------------------------------------GNPRFLPVPSPLSLGGEDDDEKLP--------------KMRFIACGAHHSLIIDVDGRVWTWGFSSSFQTGHAE-EDDVETPRKIM-NTAI--KPIDVKMAGGGGQFSVVAGVRKE--
>gi|167534172|Monosiga_brevicollis|XP_001748764.1| hypothetical protein [Monosiga brevicollis MX1]  _lim(1-476(1500),476)
TAKKTAPASAP--------------------------------------------------------------------------------------------------------AGIERQDIHDL-----------------------------------------------------------------------------TPANKGHCLAVGINCFGQLGVGD------HITERKKPAFVRKGTLENVL------------------VTDVAAGGMHTAVVDEQHRVHTFGCNDEGALGRPASS---------------------------NEEESYPGLA---QGL---DDIKAIQVTAGDSHTAILGSDGYVYAVGVFRDDDGSLAFS--PTSLIE---------RQFCRVFPTDEMLKATQTRRRKLPLAKQISSGSDHLLILTTEGQVYSMGTGKQGQLGRLPEKKTTRDAYRS---LGALPEEIKARRTTPEFLQQVLVPGLVR-ARGFK-----------SIVKVFTGSWASFALDDE-----GHVWAWGLNNHHQLGVPRSEKASFGVDDNCVFFPQRATKFE-----NL------DISAIAGGQHHTLVCSEKQQKVFAIGRGDCGRLGL---------------------------------------------------------------NNEEEMHELSEVTTLSNQ--------------------NLTGVACAVAASYAFSNRGKAYAWGFGTNLQLTNGE-DQDELVPIELS-GQQL--DTRAVAKISGGGQHTVMLAVPND--
>gi|145344573|Ostreococcus_'lucimarinus'|XP_001416804.1| predicted protein [Ostreococcus lucimarinus CCE9901]  _lim(1-547(1500),547)
TNDRDALCAAH----------------------------------------------------------------------VEALNAQFARHVAKKTRDAPREFLVQACRDYVTYANAIRKEFRDAAGAGAAADEAKRG----------------------------------------------------------------EASASGEAYVWGQGDSAQLGLGG------DVDERRRPTRVTTGAMGEAR------------------ATRIAAGGTHTLALTSDGACYSWGNNDNGALGRVVNK------------------------DADPDAEYAPGKV---ELP---LDVKVVMVSTGDSHGCALTESGEVWAWGQFRTTNGAWAFN--PNT-------------LDAQKTSFPFKIYAPA---SSKERAKAIVSGVDHVLALSREGGVYSWGCSEKGRLGRVDASEAEDNEQASDDVKRRL-----------------LTPSRVA-LPKSGGGIGSAFGGEPEVTAIVAGDFHSFAICADEDGSKSDVYGWGLSNFHQVGLWDPNPD-LRGDEQVTYFPKRVASLC-----GK------CIVAGDAGAHHSLFLTGD-GKIIAIGRYTDGRCGVRVPNA----------------------------------------------------------ALDGALEEPRVIEDLPG---------------------RAVKVASGDTCGGAIMEDGSAYVWGSQYIGQLGLGPREEDAYTPEKMPYTKPM--AGKVFAELSFGGQHAAALLIDAKDD