>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/1DE4/complex.1 A 371|PDB|input
RSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHE--SRRVEPRTPWV--SSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSK--------ESHTLQVILGCEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKI-RARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSV--TTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLA-VPPGEE--QRYTCQVEHPG------LDQPLIVIWIQR---TPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
>gi|62177119|Canis_lupus|NP_001014401.1| MHC class I DLA-12 [Canis lupus familiaris]  _lim(1-358(1500),358)
GSHSLRYFYTSVSRPGRGDPRFIAVGYVDDTQFVRFDSDAATGRMEPRAPWV---EQEGPEYWDPQTRTIKETARTFRVDLDTLRGYYNQSE-------AGSHTFQWMFGCDLGPGGRLLRGYSQDAYDGADYIALNEDLRSWTAADAAAQITRRKREAAGD--AGHLRNYLETTCVEWLRRYLEMGKETLLRAEPPSTRVTRHPVSDHE-VTLRCWALGFYPAEITLTWQRDGEDQT-QDTEVVDTRPAGDGTFQKWAAVV-VPSGQE--QRYTCHVQHEG------LVEPVTRRWVQH---PPKIQVYSRHPAENGKPNFLNCYVSGFHPPEIEIDLLKNGKEM-KAEQTDLSFSKDWTFYLLVHTEFTPNEQDEFSCRVKHVTLSEPQIVKWDRD-
>gi|301786316|Ailuropoda_melanoleuca|XP_002928593.1| PREDICTED: hereditary hemochromatosis protein homolog [Ailuropoda melanoleuca] _lim(1-343(1500),343)
WSHSLRFLFMGASVPDLGLPLFEALGYVDDQLFVSYSHE--SRRAEPRAPWV--RGGAASQLWLQLSQSLKGWDHMFIVDFWTIMDNHNRSKVTKLGVSSESHTLQVILGCEVQEDNST-RGFWKYGYDGQNHLEFCPETLDWRAAEPKAQATKLEWEVNKI-RAKQNRAYLERDCPEQLQRLLELGRGVLDRQVPPSVKVTHHVASAV--STLRCQALNFYPRSITMKWLKDRQPLDAQDVEPEDVLPNGDGTFQGRVALV-VAPGEE--RRYACRVEHSG------LDQPLTATWVQH---APKIQVYSRHPAENGKPNFLNCYVSGFHPPEIEIDLLKNGEKM-KAEQSDLSFSKDWTFYLLVHTEFTPNGQDEFSCRVKHVTLSEPQIIKWERD-
>gi|149731860|Equus_caballus|XP_001497095.1| PREDICTED: similar to HFE protein [Equus caballus] _lim(1-348(1500),348)
RSHSLRYLFMGASEPDLGLPLFEALGYVDDQLFVAYNHE--SRRAESRAQWV--LGGATSQLWLQLSQSLKGWDHMFIVDFWTIMDNHNHSK--------ESHTLQVILGCEVQEDNST-RGFWKYGYDGQDHLEFCLETLDWRAAESKAVTTKLEWEVNKI-RAKKNKAYLERDCPEQLQWLLELGRGVLDRQVPPLVKVTHHVASAV--TFLRCQALNFYPQNITVRWLKDRQPVDAKDAESEDVLPNGDGTYQTWVALA-VTPGEE--QRYTCQVEHPG------LDQPLTATWVPR---VPKVQVYSRHPAENGKPNFLNCYVSGFHPPEIEIDLLKNGEKM-KVDRSDLSFSKDWSFYLLVHTDFTPNGVDEYSCRVQHSTLKDPLIVKWDRD-
>gi|59958366|Bos_taurus|NP_001012399.1| hemochromatosis [Bos taurus]  _lim(1-356(1500),356)
RSHSLRFLFMGASKPDLGLPLFEALGYVDDQLFVSYDHE--SRRAERRAPWL--WGRATSQLWLQLSQNLKGWDHMFIVDFWTIMDNHNQSKVTKLGALPESHTLQVILGCELQEDNST-RGFWKYGYDGQDHLEFRPETLDWRAAEPRAQVTKLEWEVNKI-RAKQNRAYLDRDCPEQLLHLLELGRGPLEQQVPPLVKVTHHVTSSL--TTLRCRALNFYPQNITIRWLKDKQFLDAKEIKPEDVLPNGDGTYQAWVALA-MLPGEE--QRYSCQVEHPG------LDQPLTATWIQR---PPKIQVYSRHPPEDGKPNYLNCYVYGFHPPQIEIDLLKNGEKI-KSEQSDLSFSKDWSFYLLSHAEFTPNSKDQYSCRVKHVTLEQPRIVKWDRD-
>gi|311259842|Sus_scrofa|XP_001928005.2| PREDICTED: hereditary hemochromatosis protein homolog [Sus scrofa]  _lim(1-355(1500),355)
RPHSLLFLFMGASEPDLGLPLFEALGYVDDQLFVSYNHE--SRRAEPRAPWL--SGKASNQLWLQLSQSLKGWDHMFTVDFWTIMDNHNYSKITKLGVLPESHTLQVILGCEVQADNST-RGFWKYGYDGQDHLEFHPETLDWGAAEPRAWATKLEWEVSKI-RAKQNRAYLERDCPEQLRRLLELGRGALDQQAPPLVKVTHHVASAV--TTLRCQALNFYPQNITMRWLKDRQPLDAKDIEPRDVLPNGDGTYQSWVALV-VLPGEE--QRYSCQVEHPG------LDQPLTARWVAR---PPKVQVYSRHPAENGKPNYLNCYVSGFHPPQIEIDLLKNGEKM-NAEQSDLSFSKDWSFYLLVHTEFTPNAVDQYSCRVKHVTLDKPKIVKWDRD-
>gi|114326435|Felis_catus|NP_001041626.1| MHC class I antigen [Felis catus]  _lim(1-362(1500),362)
GSHSLRYFYTAVSRPGLGEPRFISVGYVDDTQFVRFDSDAPNPREEPRAPWM---EQEGPEYWDRNTRIYLDTAQISRVNLNTFRRYYNQSE-------SGSHNIQRMYGCDVDPDRRFLRGYSQDSYDGKDYIALNEDLRSWTAADTAAQITRRKWEEAGV--AEQERNYLEGTCVEWLAKYLDMGKETLVRAESPNTRVTRHPISDRE-VTLRCWALGFYPAEITLTWQRDGQDHT-QDTELVETRPAGDGTFQKWAAVV-VPSGEE--QRYTCHVQHKG------LPEPINLRWVQH---SPKVQVYSRHPAENGKPNFLNCYVSGFHPPQIDITLMKNGKKM-EAEQTDLSFNRDWTFYLLVHTEFTPTVEDEYSCQVNHTTLSEPKVVKWDRD-
>gi|291395679|Oryctolagus_cuniculus|XP_002714258.1| PREDICTED: Hereditary hemochromatosis protein homolog [Oryctolagus cuniculus] _lim(1-348(1500),348)
RSHSLLYLFMGASQPDLGLPLFEALGYLDDQLFVSYDHE--SRRAEPRAPWL--QGGTSSQLWLQLSQSLKGWDHMFTVDFWTIMDNHNHSQ--------GSHTLQVILGCEVREDNST-RGFWKYGYDGQDHLEFCPETLDWKAAEPGAQATKLEWEVHKI-RAKQNKVYLERDCPEQLQQLLEVGRGTLDQQVAPSVTVTRHMSSAT--TTLRCRALHFYPPNITMQWLKDRQPLEAKDVELRTMLPNGDGTYQARVALT-VPYGEE--QRFTCWVEHPG------LDQPIAATWVQR---APNVQVYSRHPAENGKPNFLNCYVSGFHPPQIDIELLKNGVKIENVEQSDLSFNKDWSFYLLVHTEFTPNDKDEYSCRVKHVTLKEPMTVKWDRD-
>gi|31981697|Mus_musculus|NP_034554.2| hereditary hemochromatosis protein homolog precursor [Mus musculus]  _lim(1-359(1500),359)
RSHSLRYLFMGASEPDLGLPLFEARGYVDDQLFVSYNHE--SRRAEPRAPWI--LEQTSSQLWLHLSQSLKGWDYMFIVDFWTIMGNYNHSKVTKLGVVSESHILQVVLGCEVHEDNST-SGFWRYGYDGQDHLEFCPKTLNWSAAEPGAWATKVEWDEHKI-RAKQNRDYLEKDCPEQLKRLLELGRGVLGQQVPTLVKVTRHWASTG--TSLRCQALDFFPQNITMRWLKDNQPLDAKDVNPEKVLPNGDETYQGWLTLA-VAPGDE--TRFTCQVEHPG------LDQPLTASWIQK---TPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRD-
>gi|25742831|Rattus_norvegicus|NP_445753.1| hereditary hemochromatosis protein homolog isoform 1 precursor [Rattus norvegicus]  _lim(1-360(1500),360)
GSHSLRYLFMGASKPDLGLPFFEALGYVDDQLFVSYNHE--SRRAEPRAPWI--LGQTSSQLWLQLSQSLKGWDYMFIVDFWTIMGNYNHSKVTKLRVVPESHILQVILGCEVHEDNST-SGFWKYGYDGQDHLEFCPKTLNWSAAEPRAWATKMEWEEHRI-RARQSRDYLQRDCPQQLKQVLELQRGVLGQQVPTLVKVTRHWASTG--TSLRCQALNFFPQNITMRWLKDSQPLDAKDVNPENVLPNGDGTYQGWLTLA-VAPGEE--TRFSCQVEHPG------LDQPLTATWIQK---TPQIQVYSRHPPENGKPNFLNCYVSQFHPPQIEIELLKNGKKIPNIEMSDLSFSKDWSFYILAHTEFTPTETDVYACRVKHVTLKEPKTVTWDRD-
>gi|126309645|Monodelphis_domestica|XP_001369219.1| PREDICTED: similar to MHC class I antigen isoform 1 [Monodelphis domestica] _lim(1-362(1500),362)
GSHSMRYFHTAMSRPELGDSQFITVGYVDDQQFVRFDSSSESQRMEPRAAWMDKMDEEEPNYWEEQTQIYRKNAQIYRRNLETLRGYYNQSQ-------GGLHTIQRMYGCEVHPDGSFRKGFYQLAYDGRDYIALHRETLTWTAADPGAENTKRKWEAERS-IAERYKAYLEETCLQWLKKYLQMGKDVLLRTDPPSARVSRHSGPDGE-VSLRCRAQGFYPAEISLTWLRDGEEQL-QDTEFIETRPGGDGTFQKWAAVA-MAPGQE--DRYSCRVQHEA------LAQPLSLRWITSSSGPPRVQVYSRYPPDSDKSNFLNCYVSGFHPPQITIELLKDGKKMENVEQSDLSFSKDWTFNLLVSAPFDPNSNSEFACKVTHSTLNEPKVVKWDKD-
>gi|149615993|Ornithorhynchus_anatinus|XP_001509612.1| PREDICTED: similar to MHC class I antigen, partial [Ornithorhynchus anatinus] _lim(1-334(1500),334)
RSHFLRYFYTAVSRPGPGVPAFTAVGYLDDQQFVRFDSN--RQKVEGLTTWI--QGGQGPDYWEQQNQELRGTQQIFLQNLQVALSYYNQSE-------GGYHSYQEMYGCELRTDGSTGKAYDRYGYDGQDYITLDLDTLTWTAANPEAQYTKRKWEANKK-KLELEKAYLQGQCVYWISEYLKLGGDSLNRTEPPSVRVTRHPSQDEDNVTLRCQALGFYPADIRMRWQRDGEDLT-RDTEHVETRPGGDGTFQKWTAVVGVSHGQE--QRYVCVVDHDG------LANPLAVGWITS---SPKIQVYSRHPAQIGESNNLNCYVSSFHPPQISIRLLKNGQEMPGVEMSDLSFSNDWTFHRLVHTVFTPSNQDTFECEVVHEGVK--KTVKWEPD-
>gi|296040499|Gallus_gallus|NP_001171648.1| MHC-like class I Y [Gallus gallus] _lim(1-353(1500),353)
GLHSLRYFLTGMTDPGPGMPRFVIVGYVDDKIFGIYDSK--SRTAQPIVEML---PQEDREHWAAQTQKAQGGERDFDRGLGRLPERYNKSK--------GSHTLQMMFGCDILEDGSI-RGYDQYAFDGRDYIAFDMDTMTFTAADPVAEITKRRWETEGT-YAERWKHELGTVCVQNLRRYLEHGKAALKRRVQPEVRVWRKEANGI--LTLSCHAYGFYPRPIAISWMKDGMVRD-QETHWGGVVPNSDGTYHASAAID-VLPEDG--DKYWCRVEHAS------LPQPGLFSWADL---TPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSSGSTYACKVEHETLKEPQVYKWDPE-
>gi|326935867|Meleagris_gallopavo|XP_003213987.1| PREDICTED: class I histocompatibility antigen, F10 alpha chain-like, partial [Meleagris gallopavo] _lim(1-335(1500),335)
-----RYFLTGMTDPGPGMPQFTAVGYVDGKAFGNYDSE--RRTVRPIVDWL---PREDREHWDAETKKARSGELDFYVGLGWLREHYNKSG--------GSHTLQKMFGCDILEDGSV-RGYDQYAFDGRDYIAFEMDTMTFTAANAVAQSTKRKWESEGT-YAERWKHELGTVCVENLRRYRGARKDRAERRERPEVRVRGKEADGI--LTLSCRAHSFYPRPITISWMKDGVVQD-QETHWGGIVPNSDGTYHASATID-VPPGDW--DKYQCRVEHAS------LLQSSFFSW-DL---TPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWSFQRLVYADFTPSSDAVYTCKVDHETLKEPQVYKWDPE-
>gi|327286156|Anolis_carolinensis|XP_003227797.1| PREDICTED: major histocompatibility complex class I-related gene protein-like, partial [Anolis carolinensis] _lim(1-307(1500),307)
RSHRLHYFFTGVSEPGGGLPHFSIVGYLDDEQFVRYDSE--TRRDLPRSSWIRKMEEHDAQYWDWQTQLSRSWELYFRVSLWT---RFNHSR--------GHHTWQWMHGCEVSADGRK-GGLSQFGYDGRDFLSLDKETLTWTASNPKAQVTKRKWEADRV-WTQGRKTFLEEDCIDWLHKYLNYGKETLLRKESPVVKVTRKAGYGDL-ETLLCRAHGFYPKEIDITWRMEGNVME-QETRRGGIAPNADGTYHTWLSIE-VDTKDR--DLYRCHVEHDS------LPEPLDAAWTQK---APSVQVYFRHPAEKGKENTFHCYAESFHPPKINITLLKNGIPMENVQQSDLSFKKDWTFERLVYAKVIPDGKAEFACKVEHITLPQPMIYKLDQE-
>gi|49258160|Danio_rerio|AAH74095.1| Major histocompatibility complex class I UBA gene [Danio rerio]  _lim(1-348(1500),348)
ATHSWKAYYTGTTGLT-EFPEFVALNLIDDQLMGYFDSK--TNRFKSQFQWM--EDNLGKEYDEQQTNILLGYPEVFKNNIKVVMERFNQTQ--------GVHTFQFMYGCEMDDDGNK-QVHWQIGYDGEDFISLDKKTLTWTAANSQAMTTKVKWDSTGA-EANYWKGYLENECIEWVQKYVGYGKDTLERKVSPQVSLLQKSSS----SPVVCHVTGFYPSGLKISWQRNGQDHD-EDVELGELIPNEDGTYQRTSTLN-VKPEEWKKDKFSCVVEHQSKTINSILTEDEIRT-------PPKVQVYSRNPGEYDKENTLICYVSGFHPPDITIELLKNGQPIEKTTQTDLAFEQGWFFHLTKFAAFKPRPGEVYTCQVRH--LTETKTYTWEPD-
>gi|224080959|Taeniopygia_guttata|XP_002186567.1| PREDICTED: similar to MHC class I antigen, partial [Taeniopygia guttata] _lim(1-334(1500),334)
-LHSLHYLHVAVSEPSPGVPQFTSIGFVDGIPFVRYDSE--RGRAEPLTQWM--KDGAEPGYWDEETQISVRNQHVDARNLETLQERYNQSR--------GLHTALWAYGCDLLSDGSV-RGSRRYGYDGRDFISFDLGSGKFLAADSAAEITRRRWEQEDM--AERLKNYLKHKCPEWLRKYVGYGQKELERKEPPDVHVSGKEEYGT--LILSCHAYGFYPNTITVSWMKENATLD-QEMEWGGIVPNSDGTFHTWARIE-ALPEEW--EQYRCKVDHPG------MLEPGLFAWAAE---SPKVEVYARSRAEEGKENILHCFVTGFHPPKIDIKLLKNGDPIPGVKYGDLSFNEKWQFQRLVYVPFTPTRGDTFSCEVAHSTMPKSRNYLWEPD-