>gi| /home/faure/THESIS/BENCHMARK/Benchmark3.0_ZDOCK3.0/BM3/DECOYS/1BUH/complex.1 B 76|PDB|input
SHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKT----------HLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPKKP
>gi|327289866|Anolis_carolinensis|XP_003229645.1| PREDICTED: cyclin-dependent kinases regulatory subunit 1-like [Anolis carolinensis] _lim(1-79(1500),79)
SQKQIYYSDKYDDEEYEYRHVMLPKDIAKLVPKT----------HLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPKKP
>gi|57525739|Danio_rerio|NP_001003593.1| CDC28 protein kinase 1B [Danio rerio]  _lim(1-79(1500),79)
SHKQIYYSDKYDDDKFEYRHVMLPKDIAKRVPKT----------HLMSETEWRNLGVQQSQGWVHYMIHQPEPHILLFRRPLPVAQ
>gi|154147625|Xenopus_(Silurana)|NP_001093685.1| CDC28 protein kinase regulatory subunit 1B [Xenopus (Silurana) tropicalis]  _lim(1-78(1500),78)
SAKNIYYSDKYDDELYEYRHVMLPKDIAKMVPKT----------HLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPIKK
>gi|126307770|Monodelphis_domestica|XP_001373559.1| PREDICTED: similar to Cks1 protein homologue [Monodelphis domestica] _lim(1-120(1500),120)
SHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKT----------HLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPKKP
>gi|118104196|Gallus_gallus|XP_001231967.1| PREDICTED: similar to Cks1 protein homologue [Gallus gallus] _lim(1-79(1500),79)
AHKDIYYSDKYFDEQYEYRHVMLPRELLKRMPKA----------HLLSEEEWRSLGVQQSLGWVHYMIHEPEPHILLFRRPLPKDD
>gi|224088667|Taeniopygia_guttata|XP_002192954.1| PREDICTED: similar to mCG1274 [Taeniopygia guttata] _lim(1-79(1500),79)
ANKQIYYSNKYSDEQYEYRHVMLPRELSKQVPKS----------HLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFRRPLPKDE
>gi|156364737|Nematostella_vectensis|XP_001626502.1| predicted protein [Nematostella vectensis]  _lim(1-83(1500),83)
SIDQIYYSEKYFDSQYEYRHVMVPKDIAKLVPRK----------KLMTESEWRQIGIQQSQGWQHYMHHHPEPHIILFRRQRTDNP
>gi|224106860|Populus_trichocarpa|XP_002314309.1| regulatory subunit of cyclin-dependent kinase [Populus trichocarpa]  _lim(1-84(1500),84)
-MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKN----------RLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNFQQ
>gi|15226297|Arabidopsis_thaliana|NP_180364.1| CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator [Arabidopsis thaliana]  _lim(1-83(1500),83)
-MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKN----------RILSESEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ
>gi|242042231|Sorghum_bicolor|XP_002468510.1| hypothetical protein SORBIDRAFT_01g047130 [Sorghum bicolor]  _lim(1-87(1500),87)
-MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN----------RLLSENEWRAIGVQQSRGWMHYAIHRPEPHIMLFRRPINYQQ
>gi|115450713|Oryza_sativa|NP_001048957.1| Os03g0146300 [Oryza sativa Japonica Group]  _lim(1-90(1500),90)
-MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKN----------RLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNFQQ
>gi|241738745|Ixodes_scapularis|XP_002412359.1| cyclin-dependent kinase regulatory subunit, putative [Ixodes scapularis]  _lim(1-92(1500),92)
AQKNIYYSDKYYDDKYEYRHVVLPKEIAKLVPKS----------RLMSETEWRGIGVQQSHGWVHYMIHEPEPHILLFRRAVTPTE
>gi|145348966|Ostreococcus_'lucimarinus'|XP_001418912.1| predicted protein [Ostreococcus lucimarinus CCE9901]  _lim(1-75(1500),75)
-MPQIQYSEKYYDDVYEYRHVVLPPDIAKLLPKN----------RLLTETEWRGLGVQQSRGWVHYAIHRPEPHIMLYRRPKETT-
>gi|321461144|Daphnia_pulex|EFX72179.1| hypothetical protein DAPPUDRAFT_111007 [Daphnia pulex] _lim(1-75(1500),75)
PNTEIQYSDKYTDENFEYRHVILPPEMAKLVPRT----------HLMTETEWRNLGVQQSPGWVHYMVHNPEPHVLLFRRPK----
>gi|167521890|Monosiga_brevicollis|XP_001745283.1| hypothetical protein [Monosiga brevicollis MX1]  _lim(1-74(1500),74)
MADQICYSVKYFDDTHEYRHVILPKSIARHVPDD----------RLMTETEWRNLGVQQSRGWIHYMIHRPEPHILLFRRKKT---
>gi|260814570|Branchiostoma_floridae|XP_002601987.1| hypothetical protein BRAFLDRAFT_59154 [Branchiostoma floridae]  _lim(1-82(1500),82)
AHKHIYYSDKYYDDKFEYRHVMLPKELAKLVPKS----------HLMSETEWRGIGVQQSQGWCHYMKHEPEPHILLFRRPITTPP
>gi|198411926|Ciona_intestinalis|XP_002127051.1| PREDICTED: similar to suc1 homologue [Ciona intestinalis] _lim(1-81(1500),81)
SANDIYYSDKYFDDRYEYRHVMLPRELSKLVPKS----------HLMSEAEWRSLGVQQSQGWIHYMKHEPEPHILLFRREVPNQI
>gi|149566175|Ornithorhynchus_anatinus|XP_001507511.1| PREDICTED: similar to family with sequence similarity 83, member E, partial [Ornithorhynchus anatinus] _lim(1-88(1500),88)
RGPAVTRAPPLRGRP---RHVMLPKDIAKLVPKT----------HLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPQKP
>gi|118777340|Anopheles_gambiae|XP_307855.3| AGAP009442-PA [Anopheles gambiae str. PEST]  _lim(1-76(1500),76)
SVKDIYYSDKYYDDEYEYRHVVLPKDIAKLVPKT----------HLMTENEWRAIGVQQSRGWVHYMVHQPEPHILLFRRPITK--
>gi|157106355|Aedes_aegypti|XP_001649286.1| cyclin-dependent kinases regulatory subunit. putative [Aedes aegypti]  _lim(1-76(1500),76)
SVKDIYYSDKYYDDEYEYRHVVLPKDIAKLVPKT----------HLMTENEWRSIGVQQSRGWIHYMIHQPEPHILLFRRPKTT--
>gi|17136850|Drosophila_melanogaster|NP_476947.1| Cyclin-dependent kinase subunit 30A [Drosophila melanogaster]  _lim(1-74(1500),74)
MSKDIYYSDKYYDEQFEYRHVVLPKELVKMVPKT----------HLMTEAEWRSIGVQQSRGWIHYMIHKPEPHILLFRRPKT---
>gi|195444686|Drosophila_willistoni|XP_002069981.1| GK11278 [Drosophila willistoni]  _lim(1-99(1500),99)
PADQIQYSEKYYDEKFEYRHVILPADLAKHVPKA----------HLMTETEWRNLGVQQSPGWVHYMMHAPEPHVILFRRRRVDEK
>gi|50305891|Kluyveromyces_lactis|XP_452906.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]  _lim(1-132(1500),132)
FQDSIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNG-DTGTLRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYEA
>gi|45185339|Eremothecium_gossypii|NP_983056.1| ABR109Cp [Ashbya gossypii ATCC 10895]  _lim(1-119(1500),119)
FQESIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNS-ETGTLRILTEDEWRGLGVTQSLGWEHYECHAPEPHILLFKRPLNFEA
>gi|50285549|Candida_glabrata|XP_445203.1| hypothetical protein [Candida glabrata CBS 138]  _lim(1-128(1500),128)
FQESIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNS-EVGTLRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYEA
>gi|6319611|Saccharomyces_cerevisiae|NP_009693.1| Cks1p [Saccharomyces cerevisiae S288c]  _lim(1-150(1500),150)
FQDSIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNS-EVGTLRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYEA
>gi|50423397|Debaryomyces_hansenii|XP_460281.1| DEHA2E22550p [Debaryomyces hansenii CBS767]  _lim(1-102(1500),102)
FQDMIHYSPRYSDDTHEYRHVMLPKNMLKAIPQDYFNP-ETGTLRILQEEEWRGLGITQSLGWAHYETHAPEPHILLFKRPINYG-
>gi|126136569|Scheffersomyces_stipitis|XP_001384808.1| Cyclin-dependent kinases regulatory subunit (Cell division control protein CKS1) [Scheffersomyces stipitis CBS 6054]  _lim(1-102(1500),102)
FQDMIHYSPRYSDDTHEYRHVMLPKNMLKVIPQDYFNP-ETGTLRILLEEEWRGLGITQSLGWSHYETHAPEPHILLFKRPINYG-
>gi|68491056|Candida_albicans|XP_710663.1| hypothetical protein CaO19.1282 [Candida albicans SC5314]  _lim(1-102(1500),102)
FQDMIHYSPRYSDDSYEYRHVMLPKNMLKAIPHDYFNQ-ETGTLRILTEEEWRGLGITQSLGWAHYETHAPEPHILLFKRPLNPG-
>gi|149237971|Lodderomyces_elongisporus|XP_001524862.1| cyclin-dependent kinases regulatory subunit [Lodderomyces elongisporus NRRL YB-4239]  _lim(1-103(1500),103)
FQDMIHYSPRYSDDTHEYRHVMLPKNMLKVIPQDYFNP-ETGTLRILLEEEWRGLGITQSLGWVHYETHAPEPHILLFKRPINYG-
>gi|50556364|Yarrowia_lipolytica|XP_505590.1| YALI0F18700p [Yarrowia lipolytica]  _lim(1-99(1500),99)
FQEAIHYSTRYSDDTFEYRHVMLPKNMLKAIPRDYFNS-ETGTLRILLEEEWRGLGITQSLGWEHYETHAPEPHILLFKRN-----
>gi|154299919|Botryotinia_fuckeliana|XP_001550377.1| hypothetical protein BC1G_10850 [Botryotinia fuckeliana B05.10]  _lim(1-116(1500),116)
FIDAIHYSARYSDDQYEYRHVQLPKAMLKVIPKEYHDP-QTGTLKLLWEEEWRALGITQSLGWEHYEVHEPEPHILLFKRSINYQP
>gi|58268212|Cryptococcus_neoformans|XP_571262.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]  _lim(1-124(1500),124)
YEEKIHYSARYSNDEWEFRHVIIPKPLVRFIPPG-----------VCAEEVWRGIGIRQSPGWEMYMRHEPEPHVLLFRRPKNYDQ
>gi|19112223|Schizosaccharomyces_pombe|NP_595431.1| cyclin-dependent protein kinase regulatory subunit Suc1 [Schizosaccharomyces pombe 972h-]  _lim(1-113(1500),113)
FIDQIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNP-ETGTLRILQEEEWRGLGITQSLGWEMYEVHVPEPHILLFKREKDYQM
>gi|170088456|Laccaria_bicolor|XP_001875451.1| predicted protein [Laccaria bicolor S238N-H82]  _lim(1-100(1500),100)
-FNRIHYSDRYSDDEFEYRHVILPKQLLKMVPKEYFNQDDTGTLRLLTEQEWRGIGITQSLGWEHYEVHAPEPHVLLFRRAKDFMP
>gi|308449360|Caenorhabditis_remanei|XP_003087938.1| hypothetical protein CRE_27999 [Caenorhabditis remanei]  _lim(1-95(1500),95)
GSNDFYYSNKYEDDEYEYRHVHVTKDIAKLIPKN----------RLMSETEWRSLGIQQSPGWIHYMIHGPERHVLLFRRALEKAT
>gi|268570521|Caenorhabditis_briggsae|XP_002640765.1| C. briggsae CBR-CKS-1 protein [Caenorhabditis briggsae]  _lim(1-94(1500),94)
GSNDFYYSNKYEDDEYEYRHVHVTKDVAKLIPKN----------RLMSETEWRSLGIQQSPGWIHYMIHGPERHVLLFRRPLPNAQ
>gi|17539564|Caenorhabditis_elegans|NP_501457.1| Cyclin-dependent protein Kinase (CDC28) regulatory Subunit family member (cks-1) [Caenorhabditis elegans]  _lim(1-94(1500),94)
GNNDFYYSNKYEDDEFEYRHVHVTKDVSKLIPKN----------RLMSETEWRSLGIQQSPGWMHYMIHGPERHVLLFRRPLAATQ
>gi|196002491|Trichoplax_adhaerens|XP_002111113.1| hypothetical protein TRIADDRAFT_21990 [Trichoplax adhaerens]  _lim(1-79(1500),79)
SYKNVIYSDKYFDENFEYRHVILPKDIAKKVPKD----------HLMTEDEWRGIGVQQSKGWIHYMKHGPEPHVLLFRRPLSISN
>gi|125778035|Drosophila_pseudoobscura|XP_001359811.1| GA22037 [Drosophila pseudoobscura pseudoobscura]  _lim(1-91(1500),91)
PADQIQYSEKYFDDKFEYRHVILPSDLAKHVPKA----------HLMTETEWRNLGVQQSPGWVHYMMHAPEPHVILFRRKRVGEE
>gi|225436436|Vitis_vinifera|XP_002274064.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]  _lim(1-88(1500),88)
-MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLQKN----------RLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ
>gi|146097182|Leishmania_major|XP_001468066.1| cyclin-dependent kinase regulatory subunit [Leishmania infantum JPCM5]  _lim(1-99(1500),99)
LQCKILYSDKYYDDVFEYRHVILPKDLARLVPTS----------RLMSEMEWRQLGVQQSQGWVHYMIHKPEPHVLLFKRPR----