Search   search the PDB      PDBlite          Interface to PDBlite service.

from a sequence      SAM-t02          HMM-based threader Protein Structure Prediction

3DPSSM          3D-PSSM profile threader Protein Structure Prediction

123D          123D threader

Browse classifications of protein structures      SCOP          SCOP: Structural Classification of Proteins

CATH          CATH: automated Protein Structure Classification

SARF-tree          SARF: classification of structures

ASTRAL          ASTRAL

from a structure      CE-all          Search the PDB for a structures similar to yours using CE

DALI-all          Search the PDB for a structures similar to yours using DALI

VAST          Search the PDB for a structures similar to yours using VAST

MATRAS-all          Search the PDB for a structures similar to yours using MATRAS

Utilities      PDBPileUp          multiPDB file generation

PDBpart          PDB part extraction

Superpose 2 structures   Automated search      CE          Pairwise comparison of 2 strcutures using CE

DALI          Pairwise comparison of 2 strcutures using DALI

K2          Pairwise comparison of 2 strcutures using K2

SARF          SARF structural alignement

MATRAS          MATRAS structural alignement of 2 structures

Analyse   Solvent accessible surface area      VADAR          VADAR (Volume, Area, Dihedral Angle Reporter) suite of services

Domains      3Dee

PDP